RNA–Protein interactions for RNA: ENST00000368979.6

SNX3-203, Transcript of sorting nexin 3, humanhuman

TSL 2

Gene SNX3, Length 1,537 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX3-203ENST00000368979 ZNF132P52740 706 aa25.58■■□□□ 1.69
SNX3-203ENST00000368979 NAB2Q15742 525 aa25.58■■□□□ 1.69
SNX3-203ENST00000368979 C10orf76Q5T2E6 689 aa25.58■■□□□ 1.69
SNX3-203ENST00000368979 ALKBH5Q6P6C2 394 aaKnown RBP25.58■■□□□ 1.69
SNX3-203ENST00000368979 LRRC52Q8N7C0 313 aa25.58■■□□□ 1.69
SNX3-203ENST00000368979 GSTCDQ8NEC7 633 aa25.58■■□□□ 1.69
SNX3-203ENST00000368979 DDX1Q92499 740 aaKnown RBP25.58■■□□□ 1.69
SNX3-203ENST00000368979 LPPQ93052 612 aa25.58■■□□□ 1.69
SNX3-203ENST00000368979 TOX2Q96NM4 488 aa25.58■■□□□ 1.69
SNX3-203ENST00000368979 PPP1R10Q96QC0 940 aaKnown RBP25.58■■□□□ 1.69
SNX3-203ENST00000368979 LUC7LQ9NQ29 371 aaKnown RBP25.58■■□□□ 1.69
SNX3-203ENST00000368979 NXF1Q9UBU9 619 aaKnown RBP25.58■■□□□ 1.69
SNX3-203ENST00000368979 TRIM10Q9UDY6 481 aa25.58■■□□□ 1.69
SNX3-203ENST00000368979 DNAH12Q6ZR08 3092 aa25.58■■□□□ 1.68
SNX3-203ENST00000368979 CHRNB2P17787 502 aa25.58■■□□□ 1.68
SNX3-203ENST00000368979 TNFAIP3P21580 790 aa25.58■■□□□ 1.68
SNX3-203ENST00000368979 MLH1P40692 756 aa25.58■■□□□ 1.68
SNX3-203ENST00000368979 GPNMBQ14956 572 aa25.58■■□□□ 1.68
SNX3-203ENST00000368979 C9orf57Q5W0N0 161 aa25.58■■□□□ 1.68
SNX3-203ENST00000368979 TMEM270Q6UE05 265 aa25.58■■□□□ 1.68
SNX3-203ENST00000368979 SCARA5Q6ZMJ2 495 aa25.58■■□□□ 1.68
SNX3-203ENST00000368979 RPUSD2Q8IZ73 545 aaKnown RBP25.58■■□□□ 1.68
SNX3-203ENST00000368979 TXLNBQ8N3L3 684 aa25.58■■□□□ 1.68
SNX3-203ENST00000368979 RBBP8NLQ8NC74 664 aaPredicted RBP25.58■■□□□ 1.68
SNX3-203ENST00000368979 ZFP42Q96MM3 310 aa25.58■■□□□ 1.68
SNX3-203ENST00000368979 TSGA10Q9BZW7 698 aa25.58■■□□□ 1.68
SNX3-203ENST00000368979 RGS18Q9NS28 235 aa25.58■■□□□ 1.68
SNX3-203ENST00000368979 CISHQ9NSE2 258 aa25.58■■□□□ 1.68
SNX3-203ENST00000368979 PPEF2O14830 753 aa25.57■■□□□ 1.68
SNX3-203ENST00000368979 KRT86O43790 486 aa25.57■■□□□ 1.68
SNX3-203ENST00000368979 NBNO60934 754 aa25.57■■□□□ 1.68
SNX3-203ENST00000368979 BPIFB4P59827 614 aa25.57■■□□□ 1.68
SNX3-203ENST00000368979 YWHAEP62258 255 aaKnown RBP25.57■■□□□ 1.68
SNX3-203ENST00000368979 ETF1P62495 437 aaKnown RBP25.57■■□□□ 1.68
SNX3-203ENST00000368979 CDR2Q01850 454 aa25.57■■□□□ 1.68
SNX3-203ENST00000368979 SOX4Q06945 474 aaPredicted RBP25.57■■□□□ 1.68
SNX3-203ENST00000368979 TRIM60Q495X7 471 aa25.57■■□□□ 1.68
SNX3-203ENST00000368979 CCDC122Q5T0U0 273 aa25.57■■□□□ 1.68
SNX3-203ENST00000368979 LINC01599Q8WXQ3 324 aa25.57■■□□□ 1.68
SNX3-203ENST00000368979 GAD1Q99259 594 aa25.57■■□□□ 1.68
SNX3-203ENST00000368979 PIRO00625 290 aa25.56■■□□□ 1.68
SNX3-203ENST00000368979 WEE2P0C1S8 567 aa25.56■■□□□ 1.68
SNX3-203ENST00000368979 P4HA1P13674 534 aa25.56■■□□□ 1.68
SNX3-203ENST00000368979 FMO1Q01740 532 aa25.56■■□□□ 1.68
SNX3-203ENST00000368979 FAAP100Q0VG06 881 aa25.56■■□□□ 1.68
SNX3-203ENST00000368979 KIF5AQ12840 1032 aa25.56■■□□□ 1.68
SNX3-203ENST00000368979 MYO1EQ12965 1108 aa25.56■■□□□ 1.68
SNX3-203ENST00000368979 DNTTIP2Q5QJE6 756 aaKnown RBP25.56■■□□□ 1.68
SNX3-203ENST00000368979 ZNF598Q86UK7 904 aaKnown RBP25.56■■□□□ 1.68
SNX3-203ENST00000368979 RTN4RL1Q86UN2 441 aaPredicted RBP25.56■■□□□ 1.68
SNX3-203ENST00000368979 ECHDC2Q86YB7 292 aa25.56■■□□□ 1.68
SNX3-203ENST00000368979 PALB2Q86YC2 1186 aa25.56■■□□□ 1.68
SNX3-203ENST00000368979 PGBD4Q96DM1 585 aa25.56■■□□□ 1.68
SNX3-203ENST00000368979 SDCBP2Q9H190 292 aa25.56■■□□□ 1.68
SNX3-203ENST00000368979 CYP3A43Q9HB55 503 aa25.56■■□□□ 1.68
SNX3-203ENST00000368979 DCDC2CA8MYV0 355 aa25.55■■□□□ 1.68
SNX3-203ENST00000368979 C9IYK1 514 aa25.55■■□□□ 1.68
SNX3-203ENST00000368979 MMEP08473 750 aa25.55■■□□□ 1.68
SNX3-203ENST00000368979 CD58P19256 250 aa25.55■■□□□ 1.68
SNX3-203ENST00000368979 LRPAP1P30533 357 aa25.55■■□□□ 1.68
SNX3-203ENST00000368979 TAF3Q5VWG9 929 aa25.55■■□□□ 1.68
SNX3-203ENST00000368979 ZNF677Q86XU0 584 aa25.55■■□□□ 1.68
SNX3-203ENST00000368979 RPS6KC1Q96S38 1066 aa25.55■■□□□ 1.68
SNX3-203ENST00000368979 FTHL17Q9BXU8 183 aa25.55■■□□□ 1.68
SNX3-203ENST00000368979 SMYD3Q9H7B4 428 aa25.55■■□□□ 1.68
SNX3-203ENST00000368979 RSAD1Q9HA92 442 aa25.55■■□□□ 1.68
SNX3-203ENST00000368979 ARL5CA6NH57 179 aa25.54■■□□□ 1.68
SNX3-203ENST00000368979 RAP1GAPP47736 663 aa25.54■■□□□ 1.68
SNX3-203ENST00000368979 TLE2Q04725 743 aa25.54■■□□□ 1.68
SNX3-203ENST00000368979 PLEKHG4Q58EX7 1191 aa25.54■■□□□ 1.68
SNX3-203ENST00000368979 PCDHB18PQ96TA0 734 aa25.54■■□□□ 1.68
SNX3-203ENST00000368979 PACSIN1Q9BY11 444 aa25.54■■□□□ 1.68
SNX3-203ENST00000368979 IRX2Q9BZI1 471 aaPredicted RBP25.54■■□□□ 1.68
SNX3-203ENST00000368979 FAM124BQ9H5Z6 455 aaPredicted RBP25.54■■□□□ 1.68
SNX3-203ENST00000368979 GOLGA2P5Q9HBQ8 144 aa25.54■■□□□ 1.68
SNX3-203ENST00000368979 UBN1Q9NPG3 1134 aa25.54■■□□□ 1.68
SNX3-203ENST00000368979 PRDM10Q9NQV6 1147 aa25.54■■□□□ 1.68
SNX3-203ENST00000368979 SLC38A7Q9NVC3 462 aa25.54■■□□□ 1.68
SNX3-203ENST00000368979 GUCA1BQ9UMX6 200 aa25.54■■□□□ 1.68
SNX3-203ENST00000368979 GTF3C5Q9Y5Q8 519 aaPredicted RBP25.54■■□□□ 1.68
SNX3-203ENST00000368979 KIF5CO60282 957 aa25.53■■□□□ 1.68
SNX3-203ENST00000368979 CALCAP01258 141 aa25.53■■□□□ 1.68
SNX3-203ENST00000368979 TNNC1P63316 161 aa25.53■■□□□ 1.68
SNX3-203ENST00000368979 FAM43BQ6ZT52 329 aaPredicted RBP25.53■■□□□ 1.68
SNX3-203ENST00000368979 ZNF560Q96MR9 790 aa25.53■■□□□ 1.68
SNX3-203ENST00000368979 TSPYL2Q9H2G4 693 aaPredicted RBP25.53■■□□□ 1.68
SNX3-203ENST00000368979 HIPK3Q9H422 1215 aa25.53■■□□□ 1.68
SNX3-203ENST00000368979 SEPT11Q9NVA2 429 aaKnown RBP25.53■■□□□ 1.68
SNX3-203ENST00000368979 MIOSQ9NXC5 875 aa25.53■■□□□ 1.68
SNX3-203ENST00000368979 MYO1AQ9UBC5 1043 aa25.53■■□□□ 1.68
SNX3-203ENST00000368979 INTUQ9ULD6 942 aa25.53■■□□□ 1.68
SNX3-203ENST00000368979 THP07101 528 aa25.53■■□□□ 1.68
SNX3-203ENST00000368979 GNA15P30679 374 aa25.53■■□□□ 1.68
SNX3-203ENST00000368979 PNPLA4P41247 253 aa25.53■■□□□ 1.68
SNX3-203ENST00000368979 AFF1P51825 1210 aaKnown RBP25.53■■□□□ 1.68
SNX3-203ENST00000368979 CDH8P55286 799 aa25.53■■□□□ 1.68
SNX3-203ENST00000368979 GNG11P61952 73 aa25.53■■□□□ 1.68
SNX3-203ENST00000368979 FAM189BP81408 668 aa25.53■■□□□ 1.68
SNX3-203ENST00000368979 SYT10Q6XYQ8 523 aa25.53■■□□□ 1.68
SNX3-203ENST00000368979 SLC24A5Q71RS6 500 aa25.53■■□□□ 1.68
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms