RNA–Protein interactions for RNA: ENST00000368533.7

TPM3-212, Transcript of tropomyosin 3, humanhuman

TSL 1 (best) BASIC

Gene TPM3, Length 3,131 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-212ENST00000368533 SMIM10L2AP0DMW4 78 aa11.38□□□□□ -0.59
TPM3-212ENST00000368533 SMIM10L2BP0DMW5 78 aa11.38□□□□□ -0.59
TPM3-212ENST00000368533 GNASQ5JWF2 1037 aa11.38□□□□□ -0.59
TPM3-212ENST00000368533 ADAT2Q7Z6V5 191 aaKnown RBP11.38□□□□□ -0.59
TPM3-212ENST00000368533 PASD1Q8IV76 773 aa11.38□□□□□ -0.59
TPM3-212ENST00000368533 C12orf56Q8IXR9 622 aa11.38□□□□□ -0.59
TPM3-212ENST00000368533 SPDL1Q96EA4 605 aa11.38□□□□□ -0.59
TPM3-212ENST00000368533 CAPNS2Q96L46 248 aa11.38□□□□□ -0.59
TPM3-212ENST00000368533 ZIM3Q96PE6 472 aa11.38□□□□□ -0.59
TPM3-212ENST00000368533 NAGPAQ9UK23 515 aa11.38□□□□□ -0.59
TPM3-212ENST00000368533 TPX2Q9ULW0 747 aaKnown RBP11.38□□□□□ -0.59
TPM3-212ENST00000368533 IGKV6-21A0A0C4DH24 114 aa11.37□□□□□ -0.59
TPM3-212ENST00000368533 RAD51CO43502 376 aa11.37□□□□□ -0.59
TPM3-212ENST00000368533 RASSF9O75901 435 aa11.37□□□□□ -0.59
TPM3-212ENST00000368533 GARTP22102 1010 aa11.37□□□□□ -0.59
TPM3-212ENST00000368533 MBTD1Q05BQ5 628 aa11.37□□□□□ -0.59
TPM3-212ENST00000368533 SREBF2Q12772 1141 aa11.37□□□□□ -0.59
TPM3-212ENST00000368533 C11orf91Q3C1V1 193 aa11.37□□□□□ -0.59
TPM3-212ENST00000368533 IQSEC1Q6DN90 963 aa11.37□□□□□ -0.59
TPM3-212ENST00000368533 B4GALNT4Q76KP1 1039 aa11.37□□□□□ -0.59
TPM3-212ENST00000368533 SLC17A8Q8NDX2 589 aa11.37□□□□□ -0.59
TPM3-212ENST00000368533 SLC30A5Q8TAD4 765 aa11.37□□□□□ -0.59
TPM3-212ENST00000368533 MFSD14AQ96MC6 490 aa11.37□□□□□ -0.59
TPM3-212ENST00000368533 STK33Q9BYT3 514 aa11.37□□□□□ -0.59
TPM3-212ENST00000368533 TMEM8AQ9HCN3 771 aa11.37□□□□□ -0.59
TPM3-212ENST00000368533 PPANQ9NQ55 473 aaKnown RBP11.37□□□□□ -0.59
TPM3-212ENST00000368533 PCDH10Q9P2E7 1040 aa11.37□□□□□ -0.59
TPM3-212ENST00000368533 BZW2Q9Y6E2 419 aaKnown RBP11.37□□□□□ -0.59
TPM3-212ENST00000368533 GOLGA8KD6RF30 607 aa11.37□□□□□ -0.59
TPM3-212ENST00000368533 KRIT1O00522 736 aa11.37□□□□□ -0.59
TPM3-212ENST00000368533 LLGL1Q15334 1064 aa11.37□□□□□ -0.59
TPM3-212ENST00000368533 GLE1Q53GS7 698 aaKnown RBP11.37□□□□□ -0.59
TPM3-212ENST00000368533 GLRA4Q5JXX5 417 aa11.37□□□□□ -0.59
TPM3-212ENST00000368533 LLGL2Q6P1M3 1020 aa11.37□□□□□ -0.59
TPM3-212ENST00000368533 DDX42Q86XP3 938 aaKnown RBP eCLIP11.37□□□□□ -0.59
TPM3-212ENST00000368533 FMNL3Q8IVF7 1028 aa11.37□□□□□ -0.59
TPM3-212ENST00000368533 TRIM31Q9BZY9 425 aa11.37□□□□□ -0.59
TPM3-212ENST00000368533 AP5M1Q9H0R1 490 aa11.37□□□□□ -0.59
TPM3-212ENST00000368533 OSGEPQ9NPF4 335 aa11.37□□□□□ -0.59
TPM3-212ENST00000368533 NXF1Q9UBU9 619 aaKnown RBP11.37□□□□□ -0.59
TPM3-212ENST00000368533 GNEQ9Y223 722 aaKnown RBP11.37□□□□□ -0.59
TPM3-212ENST00000368533 TMEM110-MUSTN1A8MSY1 372 aa11.36□□□□□ -0.59
TPM3-212ENST00000368533 TOM1L1O75674 476 aa11.36□□□□□ -0.59
TPM3-212ENST00000368533 KIF4AO95239 1232 aa11.36□□□□□ -0.59
TPM3-212ENST00000368533 VNN1O95497 513 aa11.36□□□□□ -0.59
TPM3-212ENST00000368533 MMEP08473 750 aa11.36□□□□□ -0.59
TPM3-212ENST00000368533 CYP2C9P11712 490 aa11.36□□□□□ -0.59
TPM3-212ENST00000368533 ARF4P18085 180 aaPredicted RBP11.36□□□□□ -0.59
TPM3-212ENST00000368533 LSP1P33241 339 aa11.36□□□□□ -0.59
TPM3-212ENST00000368533 PTENP60484 403 aa11.36□□□□□ -0.59
TPM3-212ENST00000368533 NNTQ13423 1086 aa11.36□□□□□ -0.59
TPM3-212ENST00000368533 SNCBQ16143 134 aa11.36□□□□□ -0.59
TPM3-212ENST00000368533 WLSQ5T9L3 541 aa11.36□□□□□ -0.59
TPM3-212ENST00000368533 ALS2CLQ60I27 953 aa11.36□□□□□ -0.59
TPM3-212ENST00000368533 CYB5D1Q6P9G0 228 aa11.36□□□□□ -0.59
TPM3-212ENST00000368533 ZNF467Q7Z7K2 595 aaPredicted RBP11.36□□□□□ -0.59
TPM3-212ENST00000368533 RPUSD2Q8IZ73 545 aaKnown RBP11.36□□□□□ -0.59
TPM3-212ENST00000368533 ZNF473Q8WTR7 871 aaKnown RBP11.36□□□□□ -0.59
TPM3-212ENST00000368533 CASKIN2Q8WXE0 1202 aa11.36□□□□□ -0.59
TPM3-212ENST00000368533 HVCN1Q96D96 273 aa11.36□□□□□ -0.59
TPM3-212ENST00000368533 FBXL18Q96ME1 805 aa11.36□□□□□ -0.59
TPM3-212ENST00000368533 NT5C1BQ96P26 610 aa11.36□□□□□ -0.59
TPM3-212ENST00000368533 APBA2Q99767 749 aa11.36□□□□□ -0.59
TPM3-212ENST00000368533 CCDC113Q9H0I3 377 aa11.36□□□□□ -0.59
TPM3-212ENST00000368533 DDX47Q9H0S4 455 aaKnown RBP11.36□□□□□ -0.59
TPM3-212ENST00000368533 APOBEC3GQ9HC16 384 aaKnown RBP11.36□□□□□ -0.59
TPM3-212ENST00000368533 RNF186Q9NXI6 227 aa11.36□□□□□ -0.59
TPM3-212ENST00000368533 PCDHGC5Q9Y5F6 944 aa11.36□□□□□ -0.59
TPM3-212ENST00000368533 GTPBP10A4D1E9 387 aaKnown RBP11.36□□□□□ -0.59
TPM3-212ENST00000368533 CA12O43570 354 aa11.36□□□□□ -0.59
TPM3-212ENST00000368533 CFHP08603 1231 aa11.36□□□□□ -0.59
TPM3-212ENST00000368533 TNFAIP3P21580 790 aa11.36□□□□□ -0.59
TPM3-212ENST00000368533 TMOD1P28289 359 aa11.36□□□□□ -0.59
TPM3-212ENST00000368533 CCND3P30281 292 aaPredicted RBP11.36□□□□□ -0.59
TPM3-212ENST00000368533 TFDP1Q14186 410 aa11.36□□□□□ -0.59
TPM3-212ENST00000368533 MFSD10Q14728 455 aa11.36□□□□□ -0.59
TPM3-212ENST00000368533 CRYMQ14894 314 aa11.36□□□□□ -0.59
TPM3-212ENST00000368533 DPH6Q7L8W6 267 aa11.36□□□□□ -0.59
TPM3-212ENST00000368533 ZNF572Q7Z3I7 529 aaPredicted RBP11.36□□□□□ -0.59
TPM3-212ENST00000368533 PARP9Q8IXQ6 854 aa11.36□□□□□ -0.59
TPM3-212ENST00000368533 USP38Q8NB14 1042 aa11.36□□□□□ -0.59
TPM3-212ENST00000368533 VTI1AQ96AJ9 217 aa11.36□□□□□ -0.59
TPM3-212ENST00000368533 MAF1Q9H063 256 aa11.36□□□□□ -0.59
TPM3-212ENST00000368533 CDT1Q9H211 546 aa11.36□□□□□ -0.59
TPM3-212ENST00000368533 RBM47A0AV96 593 aaKnown RBP11.35□□□□□ -0.59
TPM3-212ENST00000368533 GOLGA6L10A6NI86 522 aa11.35□□□□□ -0.59
TPM3-212ENST00000368533 E7EVH7 732 aa11.35□□□□□ -0.59
TPM3-212ENST00000368533 H0YCG3 227 aa11.35□□□□□ -0.59
TPM3-212ENST00000368533 DNM1LO00429 736 aa11.35□□□□□ -0.59
TPM3-212ENST00000368533 WEE2P0C1S8 567 aa11.35□□□□□ -0.59
TPM3-212ENST00000368533 HPDP32754 393 aaPredicted RBP11.35□□□□□ -0.59
TPM3-212ENST00000368533 RAP1GAPP47736 663 aa11.35□□□□□ -0.59
TPM3-212ENST00000368533 LACTBP83111 547 aaPredicted RBP11.35□□□□□ -0.59
TPM3-212ENST00000368533 FSCN1Q16658 493 aaKnown RBP11.35□□□□□ -0.59
TPM3-212ENST00000368533 DEFB115Q30KQ5 88 aa11.35□□□□□ -0.59
TPM3-212ENST00000368533 NOP9Q86U38 636 aaKnown RBP11.35□□□□□ -0.59
TPM3-212ENST00000368533 IRAK4Q9NWZ3 460 aa11.35□□□□□ -0.59
TPM3-212ENST00000368533 A0A1B0GUA9 196 aa11.35□□□□□ -0.59
TPM3-212ENST00000368533 CAND2O75155 1236 aa11.35□□□□□ -0.59
TPM3-212ENST00000368533 NFICP08651 508 aa11.35□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 50.8 ms