RNA–Protein interactions for RNA: ENST00000368531.6

TPM3-211, Transcript of tropomyosin 3, humanhuman

TSL 1 (best) BASIC

Gene TPM3, Length 1,115 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-211ENST00000368531 FMO5P49326 533 aa14.96□□□□□ -0.01
TPM3-211ENST00000368531 MXI1P50539 228 aa14.96□□□□□ -0.01
TPM3-211ENST00000368531 ZNF445P59923 1031 aa14.96□□□□□ -0.01
TPM3-211ENST00000368531 ERVFC1P60507 584 aa14.96□□□□□ -0.01
TPM3-211ENST00000368531 MYL7Q01449 175 aa14.96□□□□□ -0.01
TPM3-211ENST00000368531 MYO1EQ12965 1108 aa14.96□□□□□ -0.01
TPM3-211ENST00000368531 SV2CQ496J9 727 aa14.96□□□□□ -0.01
TPM3-211ENST00000368531 CDKAL1Q5VV42 579 aa14.96□□□□□ -0.01
TPM3-211ENST00000368531 PLPP4Q5VZY2 271 aa14.96□□□□□ -0.01
TPM3-211ENST00000368531 KRT39Q6A163 491 aa14.96□□□□□ -0.01
TPM3-211ENST00000368531 KIAA1841Q6NSI8 718 aa14.96□□□□□ -0.01
TPM3-211ENST00000368531 C15orf39Q6ZRI6 1047 aa14.96□□□□□ -0.01
TPM3-211ENST00000368531 TMC7Q7Z402 723 aa14.96□□□□□ -0.01
TPM3-211ENST00000368531 RNF214Q8ND24 703 aa14.96□□□□□ -0.01
TPM3-211ENST00000368531 TAS1R2Q8TE23 839 aa14.96□□□□□ -0.01
TPM3-211ENST00000368531 SENP8Q96LD8 212 aa14.96□□□□□ -0.01
TPM3-211ENST00000368531 TUBGCP2Q9BSJ2 902 aa14.96□□□□□ -0.01
TPM3-211ENST00000368531 VPS16Q9H269 839 aa14.96□□□□□ -0.01
TPM3-211ENST00000368531 ENTPD7Q9NQZ7 604 aa14.96□□□□□ -0.01
TPM3-211ENST00000368531 PCDHGC5Q9Y5F6 944 aa14.96□□□□□ -0.01
TPM3-211ENST00000368531 TIMM13Q9Y5L4 95 aaPredicted RBP14.96□□□□□ -0.01
TPM3-211ENST00000368531 KPNA7A9QM74 516 aa14.95□□□□□ -0.02
TPM3-211ENST00000368531 GOLGA6L19H0YKK7 550 aa14.95□□□□□ -0.02
TPM3-211ENST00000368531 CYB561D2O14569 222 aa14.95□□□□□ -0.02
TPM3-211ENST00000368531 LPXNO60711 386 aa14.95□□□□□ -0.02
TPM3-211ENST00000368531 CXCL14O95715 111 aa14.95□□□□□ -0.02
TPM3-211ENST00000368531 AFPP02771 609 aaKnown RBP14.95□□□□□ -0.02
TPM3-211ENST00000368531 SOD2P04179 222 aa14.95□□□□□ -0.02
TPM3-211ENST00000368531 IGFBP4P22692 258 aa14.95□□□□□ -0.02
TPM3-211ENST00000368531 IRS1P35568 1242 aa14.95□□□□□ -0.02
TPM3-211ENST00000368531 PNPLA4P41247 253 aa14.95□□□□□ -0.02
TPM3-211ENST00000368531 ELAVL2Q12926 359 aaKnown RBP14.95□□□□□ -0.02
TPM3-211ENST00000368531 MAN2A1Q16706 1144 aa14.95□□□□□ -0.02
TPM3-211ENST00000368531 SPOPLQ6IQ16 392 aa14.95□□□□□ -0.02
TPM3-211ENST00000368531 DEFB123Q8N688 67 aa14.95□□□□□ -0.02
TPM3-211ENST00000368531 LRRC52Q8N7C0 313 aa14.95□□□□□ -0.02
TPM3-211ENST00000368531 SEMA4DQ92854 862 aa14.95□□□□□ -0.02
TPM3-211ENST00000368531 SUSD3Q96L08 255 aa14.95□□□□□ -0.02
TPM3-211ENST00000368531 TCF25Q9BQ70 676 aa14.95□□□□□ -0.02
TPM3-211ENST00000368531 HERC2P3Q9BVR0 1158 aa14.95□□□□□ -0.02
TPM3-211ENST00000368531 HSD3B7Q9H2F3 369 aa14.95□□□□□ -0.02
TPM3-211ENST00000368531 TLR9Q9NR96 1032 aa14.95□□□□□ -0.02
TPM3-211ENST00000368531 NXF1Q9UBU9 619 aaKnown RBP14.95□□□□□ -0.02
TPM3-211ENST00000368531 POLIQ9UNA4 740 aa14.95□□□□□ -0.02
TPM3-211ENST00000368531 SNX9Q9Y5X1 595 aa14.95□□□□□ -0.02
TPM3-211ENST00000368531 N4BP1O75113 896 aaKnown RBP14.94□□□□□ -0.02
TPM3-211ENST00000368531 CAVIN2O95810 425 aa14.94□□□□□ -0.02
TPM3-211ENST00000368531 URODP06132 367 aa14.94□□□□□ -0.02
TPM3-211ENST00000368531 ATP1A3P13637 1013 aa14.94□□□□□ -0.02
TPM3-211ENST00000368531 EEF1GP26641 437 aaKnown RBP14.94□□□□□ -0.02
TPM3-211ENST00000368531 MCCD1P59942 119 aaPredicted RBP14.94□□□□□ -0.02
TPM3-211ENST00000368531 UBE3AQ05086 875 aa14.94□□□□□ -0.02
TPM3-211ENST00000368531 CAMK1Q14012 370 aa14.94□□□□□ -0.02
TPM3-211ENST00000368531 KRT31Q15323 416 aa14.94□□□□□ -0.02
TPM3-211ENST00000368531 SGSM1Q2NKQ1 1148 aa14.94□□□□□ -0.02
TPM3-211ENST00000368531 ZNF699Q32M78 642 aa14.94□□□□□ -0.02
TPM3-211ENST00000368531 USP41Q3LFD5 358 aa14.94□□□□□ -0.02
TPM3-211ENST00000368531 WDR72Q3MJ13 1102 aa14.94□□□□□ -0.02
TPM3-211ENST00000368531 VWA3BQ502W6 1294 aa14.94□□□□□ -0.02
TPM3-211ENST00000368531 PRSS55Q6UWB4 352 aaPredicted RBP14.94□□□□□ -0.02
TPM3-211ENST00000368531 FBXL13Q8NEE6 735 aa14.94□□□□□ -0.02
TPM3-211ENST00000368531 ANKRD20A12PQ8NF67 263 aa14.94□□□□□ -0.02
TPM3-211ENST00000368531 FAM200AQ8TCP9 573 aa14.94□□□□□ -0.02
TPM3-211ENST00000368531 RIN2Q8WYP3 895 aaPredicted RBP14.94□□□□□ -0.02
TPM3-211ENST00000368531 MMS19Q96T76 1030 aa14.94□□□□□ -0.02
TPM3-211ENST00000368531 ZBP1Q9H171 429 aa14.94□□□□□ -0.02
TPM3-211ENST00000368531 RAB20Q9NX57 234 aa14.94□□□□□ -0.02
TPM3-211ENST00000368531 LZTS1Q9Y250 596 aa14.94□□□□□ -0.02
TPM3-211ENST00000368531 EFEMP2O95967 443 aa14.93□□□□□ -0.02
TPM3-211ENST00000368531 TPM2P07951 284 aa14.93□□□□□ -0.02
TPM3-211ENST00000368531 CTSAP10619 480 aa14.93□□□□□ -0.02
TPM3-211ENST00000368531 GLUD2P49448 558 aa14.93□□□□□ -0.02
TPM3-211ENST00000368531 AARSP49588 968 aaKnown RBP eCLIP14.93□□□□□ -0.02
TPM3-211ENST00000368531 TNNC1P63316 161 aa14.93□□□□□ -0.02
TPM3-211ENST00000368531 TPM4P67936 248 aa14.93□□□□□ -0.02
TPM3-211ENST00000368531 LRMPQ12912 555 aa14.93□□□□□ -0.02
TPM3-211ENST00000368531 ADGRE1Q14246 886 aa14.93□□□□□ -0.02
TPM3-211ENST00000368531 BMS1Q14692 1282 aaKnown RBP14.93□□□□□ -0.02
TPM3-211ENST00000368531 PTPROQ16827 1216 aa14.93□□□□□ -0.02
TPM3-211ENST00000368531 ZNF667Q5HYK9 610 aa14.93□□□□□ -0.02
TPM3-211ENST00000368531 RTP2Q5QGT7 225 aa14.93□□□□□ -0.02
TPM3-211ENST00000368531 WSCD1Q658N2 575 aa14.93□□□□□ -0.02
TPM3-211ENST00000368531 GPR153Q6NV75 609 aa14.93□□□□□ -0.02
TPM3-211ENST00000368531 PDZRN4Q6ZMN7 1036 aaPredicted RBP14.93□□□□□ -0.02
TPM3-211ENST00000368531 GLYCTKQ8IVS8 523 aa14.93□□□□□ -0.02
TPM3-211ENST00000368531 RNF168Q8IYW5 571 aaPredicted RBP14.93□□□□□ -0.02
TPM3-211ENST00000368531 MICALL1Q8N3F8 863 aa14.93□□□□□ -0.02
TPM3-211ENST00000368531 CCDC150Q8NCX0 1101 aa14.93□□□□□ -0.02
TPM3-211ENST00000368531 MYLIPQ8WY64 445 aa14.93□□□□□ -0.02
TPM3-211ENST00000368531 GAS2L1Q99501 681 aaPredicted RBP14.93□□□□□ -0.02
TPM3-211ENST00000368531 CRACR2AQ9BSW2 395 aa14.93□□□□□ -0.02
TPM3-211ENST00000368531 TTPALQ9BTX7 342 aa14.93□□□□□ -0.02
TPM3-211ENST00000368531 IMPG2Q9BZV3 1241 aa14.93□□□□□ -0.02
TPM3-211ENST00000368531 LMAN2LQ9H0V9 348 aa14.93□□□□□ -0.02
TPM3-211ENST00000368531 XYLT2Q9H1B5 865 aa14.93□□□□□ -0.02
TPM3-211ENST00000368531 NDST4Q9H3R1 872 aa14.93□□□□□ -0.02
TPM3-211ENST00000368531 MRPL17Q9NRX2 175 aaKnown RBP14.93□□□□□ -0.02
TPM3-211ENST00000368531 PCDHB8Q9UN66 801 aa14.93□□□□□ -0.02
TPM3-211ENST00000368531 TSC2P49815 1807 aa14.92□□□□□ -0.02
TPM3-211ENST00000368531 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP14.92□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms