RNA–Protein interactions for RNA: ENST00000368298.2

LMNA-204, Transcript of lamin A/C, humanhuman

TSL 1 (best)

Gene LMNA, Length 1,475 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNA-204ENST00000368298 CCDC192P0DO97 292 aa20.14■□□□□ 0.81
LMNA-204ENST00000368298 EPB41P11171 864 aaKnown RBP20.14■□□□□ 0.81
LMNA-204ENST00000368298 TAF6P49848 677 aa20.14■□□□□ 0.81
LMNA-204ENST00000368298 DLG4P78352 724 aa20.14■□□□□ 0.81
LMNA-204ENST00000368298 CREMQ03060 361 aa20.14■□□□□ 0.81
LMNA-204ENST00000368298 BFSP1Q12934 665 aa20.14■□□□□ 0.81
LMNA-204ENST00000368298 MRPL58Q14197 206 aaKnown RBP20.14■□□□□ 0.81
LMNA-204ENST00000368298 CCDC85BQ15834 202 aaPredicted RBP20.14■□□□□ 0.81
LMNA-204ENST00000368298 CTC1Q2NKJ3 1217 aa20.14■□□□□ 0.81
LMNA-204ENST00000368298 ANP32BQ92688 251 aaKnown RBP20.14■□□□□ 0.81
LMNA-204ENST00000368298 EEF2KMTQ96G04 330 aa20.14■□□□□ 0.81
LMNA-204ENST00000368298 B3GALT6Q96L58 329 aa20.14■□□□□ 0.81
LMNA-204ENST00000368298 ZNF560Q96MR9 790 aa20.14■□□□□ 0.81
LMNA-204ENST00000368298 MED15Q96RN5 788 aa20.14■□□□□ 0.81
LMNA-204ENST00000368298 PCDHB8Q9UN66 801 aa20.14■□□□□ 0.81
LMNA-204ENST00000368298 AGAP1Q9UPQ3 857 aa20.14■□□□□ 0.81
LMNA-204ENST00000368298 I3L4J1 428 aa20.13■□□□□ 0.81
LMNA-204ENST00000368298 CSPG5O95196 566 aa20.13■□□□□ 0.81
LMNA-204ENST00000368298 C4BPAP04003 597 aaKnown RBP20.13■□□□□ 0.81
LMNA-204ENST00000368298 CNPP09543 421 aaKnown RBP20.13■□□□□ 0.81
LMNA-204ENST00000368298 KRT13P13646 458 aa20.13■□□□□ 0.81
LMNA-204ENST00000368298 ERCC5P28715 1186 aaPredicted RBP20.13■□□□□ 0.81
LMNA-204ENST00000368298 TKTP29401 623 aaKnown RBP20.13■□□□□ 0.81
LMNA-204ENST00000368298 POLR2BP30876 1174 aaKnown RBP20.13■□□□□ 0.81
LMNA-204ENST00000368298 NRIP1P48552 1158 aa20.13■□□□□ 0.81
LMNA-204ENST00000368298 SCARA3Q6AZY7 606 aa20.13■□□□□ 0.81
LMNA-204ENST00000368298 TMEM184AQ6ZMB5 413 aa20.13■□□□□ 0.81
LMNA-204ENST00000368298 ANKS3Q6ZW76 656 aa20.13■□□□□ 0.81
LMNA-204ENST00000368298 CEP57Q86XR8 500 aa20.13■□□□□ 0.81
LMNA-204ENST00000368298 EFHBQ8N7U6 833 aa20.13■□□□□ 0.81
LMNA-204ENST00000368298 RIN2Q8WYP3 895 aaPredicted RBP20.13■□□□□ 0.81
LMNA-204ENST00000368298 FAM84AQ96KN4 292 aa20.13■□□□□ 0.81
LMNA-204ENST00000368298 KLHL5Q96PQ7 755 aa20.13■□□□□ 0.81
LMNA-204ENST00000368298 EMILIN2Q9BXX0 1053 aa20.13■□□□□ 0.81
LMNA-204ENST00000368298 DACH1Q9UI36 760 aa20.13■□□□□ 0.81
LMNA-204ENST00000368298 REV3LO60673 3130 aa20.13■□□□□ 0.81
LMNA-204ENST00000368298 KPNA7A9QM74 516 aa20.12■□□□□ 0.81
LMNA-204ENST00000368298 TYMPP19971 482 aa20.12■□□□□ 0.81
LMNA-204ENST00000368298 ADAM15Q13444 863 aa20.12■□□□□ 0.81
LMNA-204ENST00000368298 ZACNQ401N2 412 aa20.12■□□□□ 0.81
LMNA-204ENST00000368298 SV2CQ496J9 727 aa20.12■□□□□ 0.81
LMNA-204ENST00000368298 C15orf39Q6ZRI6 1047 aa20.12■□□□□ 0.81
LMNA-204ENST00000368298 RBM23Q86U06 439 aaKnown RBP20.12■□□□□ 0.81
LMNA-204ENST00000368298 APPL2Q8NEU8 664 aa20.12■□□□□ 0.81
LMNA-204ENST00000368298 PABPC5Q96DU9 382 aaKnown RBP20.12■□□□□ 0.81
LMNA-204ENST00000368298 SENP8Q96LD8 212 aa20.12■□□□□ 0.81
LMNA-204ENST00000368298 GDAP2Q9NXN4 497 aa20.12■□□□□ 0.81
LMNA-204ENST00000368298 BACE2Q9Y5Z0 518 aa20.12■□□□□ 0.81
LMNA-204ENST00000368298 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP20.11■□□□□ 0.81
LMNA-204ENST00000368298 ARHGEF37A1IGU5 675 aa20.11■□□□□ 0.81
LMNA-204ENST00000368298 TULP1O00294 542 aaPredicted RBP20.11■□□□□ 0.81
LMNA-204ENST00000368298 C2CD2LO14523 706 aa20.11■□□□□ 0.81
LMNA-204ENST00000368298 PER2O15055 1255 aa20.11■□□□□ 0.81
LMNA-204ENST00000368298 TEX28O15482 410 aa20.11■□□□□ 0.81
LMNA-204ENST00000368298 TBC1D4O60343 1298 aa20.11■□□□□ 0.81
LMNA-204ENST00000368298 CLASP2O75122 1294 aaKnown RBP20.11■□□□□ 0.81
LMNA-204ENST00000368298 OAZ2O95190 189 aa20.11■□□□□ 0.81
LMNA-204ENST00000368298 STAU1O95793 577 aaKnown RBP20.11■□□□□ 0.81
LMNA-204ENST00000368298 CST3P01034 146 aaPredicted RBP20.11■□□□□ 0.81
LMNA-204ENST00000368298 CYP11A1P05108 521 aa20.11■□□□□ 0.81
LMNA-204ENST00000368298 GTF2H1P32780 548 aa20.11■□□□□ 0.81
LMNA-204ENST00000368298 GTF2F1P35269 517 aaKnown RBP eCLIP20.11■□□□□ 0.81
LMNA-204ENST00000368298 MARSP56192 900 aaKnown RBP20.11■□□□□ 0.81
LMNA-204ENST00000368298 STX17P56962 302 aa20.11■□□□□ 0.81
LMNA-204ENST00000368298 TYRO3Q06418 890 aa20.11■□□□□ 0.81
LMNA-204ENST00000368298 FRMD5Q7Z6J6 570 aa20.11■□□□□ 0.81
LMNA-204ENST00000368298 PPFIBP1Q86W92 1011 aa20.11■□□□□ 0.81
LMNA-204ENST00000368298 METTL14Q9HCE5 456 aaKnown RBP20.11■□□□□ 0.81
LMNA-204ENST00000368298 MTRRQ9UBK8 725 aa20.11■□□□□ 0.81
LMNA-204ENST00000368298 FGFR1OPO95684 399 aaKnown RBP20.11■□□□□ 0.81
LMNA-204ENST00000368298 ADH1AP07327 375 aa20.11■□□□□ 0.81
LMNA-204ENST00000368298 KRT19P08727 400 aa20.11■□□□□ 0.81
LMNA-204ENST00000368298 CCDC173Q0VFZ6 552 aa20.11■□□□□ 0.81
LMNA-204ENST00000368298 MYO1EQ12965 1108 aa20.11■□□□□ 0.81
LMNA-204ENST00000368298 PSMD5Q16401 504 aa20.11■□□□□ 0.81
LMNA-204ENST00000368298 UVSSAQ2YD98 709 aa20.11■□□□□ 0.81
LMNA-204ENST00000368298 VARS2Q5ST30 1063 aaKnown RBP20.11■□□□□ 0.81
LMNA-204ENST00000368298 TDRD10Q5VZ19 366 aaKnown RBP20.11■□□□□ 0.81
LMNA-204ENST00000368298 SASS6Q6UVJ0 657 aa20.11■□□□□ 0.81
LMNA-204ENST00000368298 PRSS55Q6UWB4 352 aaPredicted RBP20.11■□□□□ 0.81
LMNA-204ENST00000368298 DSTYKQ6XUX3 929 aa20.11■□□□□ 0.81
LMNA-204ENST00000368298 SV2AQ7L0J3 742 aa20.11■□□□□ 0.81
LMNA-204ENST00000368298 SLC22A17Q8WUG5 538 aa20.11■□□□□ 0.81
LMNA-204ENST00000368298 PPM1EQ8WY54 764 aa20.11■□□□□ 0.81
LMNA-204ENST00000368298 CLSTN3Q9BQT9 956 aa20.11■□□□□ 0.81
LMNA-204ENST00000368298 OXCT2Q9BYC2 517 aaPredicted RBP20.11■□□□□ 0.81
LMNA-204ENST00000368298 ARMCX3Q9UH62 379 aaPredicted RBP20.11■□□□□ 0.81
LMNA-204ENST00000368298 H7C4K7 107 aa20.1■□□□□ 0.81
LMNA-204ENST00000368298 GNA14O95837 355 aa20.1■□□□□ 0.81
LMNA-204ENST00000368298 ODC1P11926 461 aa20.1■□□□□ 0.81
LMNA-204ENST00000368298 ATICP31939 592 aa20.1■□□□□ 0.81
LMNA-204ENST00000368298 NDUFV1P49821 464 aa20.1■□□□□ 0.81
LMNA-204ENST00000368298 CLCN4P51793 760 aa20.1■□□□□ 0.81
LMNA-204ENST00000368298 PPP3CAQ08209 521 aa20.1■□□□□ 0.81
LMNA-204ENST00000368298 LIMS2Q7Z4I7 341 aa20.1■□□□□ 0.81
LMNA-204ENST00000368298 SRRTQ9BXP5 876 aaKnown RBP20.1■□□□□ 0.81
LMNA-204ENST00000368298 VRTNQ9H8Y1 702 aa20.1■□□□□ 0.81
LMNA-204ENST00000368298 DSEQ9UL01 958 aa20.1■□□□□ 0.81
LMNA-204ENST00000368298 COG5Q9UP83 839 aa20.1■□□□□ 0.81
LMNA-204ENST00000368298 R3HCC1Q9Y3T6 440 aaKnown RBP20.1■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 43.9 ms