RNA–Protein interactions for RNA: ENST00000368297.5

LMNA-203, Transcript of lamin A/C, humanhuman

TSL 2 BASIC

Gene LMNA, Length 1,679 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNA-203ENST00000368297 TMEM161AQ9NX61 479 aa17.05■□□□□ 0.32
LMNA-203ENST00000368297 MIOSQ9NXC5 875 aa17.05■□□□□ 0.32
LMNA-203ENST00000368297 POLIQ9UNA4 740 aa17.05■□□□□ 0.32
LMNA-203ENST00000368297 PCDHB7Q9Y5E2 793 aa17.05■□□□□ 0.32
LMNA-203ENST00000368297 EVI5O60447 810 aa17.04■□□□□ 0.32
LMNA-203ENST00000368297 NDUFA10O95299 355 aa17.04■□□□□ 0.32
LMNA-203ENST00000368297 POMCP01189 267 aa17.04■□□□□ 0.32
LMNA-203ENST00000368297 PLEKP08567 350 aaPredicted RBP17.04■□□□□ 0.32
LMNA-203ENST00000368297 P4HA1P13674 534 aa17.04■□□□□ 0.32
LMNA-203ENST00000368297 EIF4A3P38919 411 aaKnown RBP17.04■□□□□ 0.32
LMNA-203ENST00000368297 AFF1P51825 1210 aaKnown RBP17.04■□□□□ 0.32
LMNA-203ENST00000368297 TNNC1P63316 161 aa17.04■□□□□ 0.32
LMNA-203ENST00000368297 SOX4Q06945 474 aaPredicted RBP17.04■□□□□ 0.32
LMNA-203ENST00000368297 CNKSR3Q6P9H4 555 aa17.04■□□□□ 0.32
LMNA-203ENST00000368297 TMEM199Q8N511 208 aa17.04■□□□□ 0.32
LMNA-203ENST00000368297 GSTCDQ8NEC7 633 aa17.04■□□□□ 0.32
LMNA-203ENST00000368297 MYRIPQ8NFW9 859 aa17.04■□□□□ 0.32
LMNA-203ENST00000368297 CCDC42Q96M95 316 aa17.04■□□□□ 0.32
LMNA-203ENST00000368297 ZNF560Q96MR9 790 aa17.04■□□□□ 0.32
LMNA-203ENST00000368297 NHEJ1Q9H9Q4 299 aaPredicted RBP17.04■□□□□ 0.32
LMNA-203ENST00000368297 ARHGAP20Q9P2F6 1191 aa17.04■□□□□ 0.32
LMNA-203ENST00000368297 PRKAG2Q9UGJ0 569 aa17.04■□□□□ 0.32
LMNA-203ENST00000368297 PCDHB4Q9Y5E5 795 aa17.04■□□□□ 0.32
LMNA-203ENST00000368297 GTF3C5Q9Y5Q8 519 aaPredicted RBP17.04■□□□□ 0.32
LMNA-203ENST00000368297 BRCA2P51587 3418 aa17.04■□□□□ 0.32
LMNA-203ENST00000368297 PPEF2O14830 753 aa17.04■□□□□ 0.32
LMNA-203ENST00000368297 IKBKEQ14164 716 aa17.04■□□□□ 0.32
LMNA-203ENST00000368297 HGSNATQ68CP4 663 aa17.04■□□□□ 0.32
LMNA-203ENST00000368297 SYT10Q6XYQ8 523 aa17.04■□□□□ 0.32
LMNA-203ENST00000368297 IRF2BP2Q7Z5L9 587 aa17.04■□□□□ 0.32
LMNA-203ENST00000368297 LRRC52Q8N7C0 313 aa17.04■□□□□ 0.32
LMNA-203ENST00000368297 URGCPQ8TCY9 931 aa17.04■□□□□ 0.32
LMNA-203ENST00000368297 HAUS4Q9H6D7 363 aa17.04■□□□□ 0.32
LMNA-203ENST00000368297 ELAC1Q9H777 363 aaKnown RBP17.04■□□□□ 0.32
LMNA-203ENST00000368297 BZW2Q9Y6E2 419 aaKnown RBP17.04■□□□□ 0.32
LMNA-203ENST00000368297 TET1Q8NFU7 2136 aa17.03■□□□□ 0.32
LMNA-203ENST00000368297 TDRD15B5MCY1 1934 aaKnown RBP17.03■□□□□ 0.32
LMNA-203ENST00000368297 ANO9A1A5B4 782 aa17.03■□□□□ 0.32
LMNA-203ENST00000368297 STAU1O95793 577 aaKnown RBP17.03■□□□□ 0.32
LMNA-203ENST00000368297 FGFR1P11362 822 aa17.03■□□□□ 0.32
LMNA-203ENST00000368297 CD58P19256 250 aa17.03■□□□□ 0.32
LMNA-203ENST00000368297 ITGB8P26012 769 aa17.03■□□□□ 0.32
LMNA-203ENST00000368297 YWHAEP62258 255 aaKnown RBP17.03■□□□□ 0.32
LMNA-203ENST00000368297 GRIK3Q13003 919 aa17.03■□□□□ 0.32
LMNA-203ENST00000368297 ARHGAP29Q52LW3 1261 aa17.03■□□□□ 0.32
LMNA-203ENST00000368297 FAM71AQ8IYT1 594 aa17.03■□□□□ 0.32
LMNA-203ENST00000368297 ABI1Q8IZP0 508 aa17.03■□□□□ 0.32
LMNA-203ENST00000368297 JAKMIP2Q96AA8 810 aa17.03■□□□□ 0.32
LMNA-203ENST00000368297 VRTNQ9H8Y1 702 aa17.03■□□□□ 0.32
LMNA-203ENST00000368297 RNF216Q9NWF9 866 aaPredicted RBP17.03■□□□□ 0.32
LMNA-203ENST00000368297 PIRO00625 290 aa17.02■□□□□ 0.32
LMNA-203ENST00000368297 CYP26A1O43174 497 aa17.02■□□□□ 0.32
LMNA-203ENST00000368297 AKR1B10O60218 316 aa17.02■□□□□ 0.32
LMNA-203ENST00000368297 KIF5CO60282 957 aa17.02■□□□□ 0.32
LMNA-203ENST00000368297 WEE2P0C1S8 567 aa17.02■□□□□ 0.32
LMNA-203ENST00000368297 CSF2RAP15509 400 aa17.02■□□□□ 0.32
LMNA-203ENST00000368297 LRPAP1P30533 357 aa17.02■□□□□ 0.32
LMNA-203ENST00000368297 PNPLA4P41247 253 aa17.02■□□□□ 0.32
LMNA-203ENST00000368297 PRKCIP41743 596 aa17.02■□□□□ 0.32
LMNA-203ENST00000368297 ASPAP45381 313 aa17.02■□□□□ 0.32
LMNA-203ENST00000368297 CLLU1OSQ5K130 101 aa17.02■□□□□ 0.32
LMNA-203ENST00000368297 MFSD5Q6N075 450 aa17.02■□□□□ 0.32
LMNA-203ENST00000368297 MMS19Q96T76 1030 aa17.02■□□□□ 0.32
LMNA-203ENST00000368297 UQCRHLA0A096LP55 91 aa17.01■□□□□ 0.31
LMNA-203ENST00000368297 LOC101059915A0A1B0GWI6 518 aaPredicted RBP17.01■□□□□ 0.31
LMNA-203ENST00000368297 SSU72P8A0A1W2PR75 194 aa17.01■□□□□ 0.31
LMNA-203ENST00000368297 CASTOR2A6NHX0 329 aa17.01■□□□□ 0.31
LMNA-203ENST00000368297 EIF3CLB5ME19 914 aaKnown RBP17.01■□□□□ 0.31
LMNA-203ENST00000368297 UQCRHP07919 91 aa17.01■□□□□ 0.31
LMNA-203ENST00000368297 RAP1GAPP47736 663 aa17.01■□□□□ 0.31
LMNA-203ENST00000368297 TAF6P49848 677 aa17.01■□□□□ 0.31
LMNA-203ENST00000368297 GNG11P61952 73 aa17.01■□□□□ 0.31
LMNA-203ENST00000368297 MAPK8IP2Q13387 824 aaPredicted RBP17.01■□□□□ 0.31
LMNA-203ENST00000368297 NAB2Q15742 525 aa17.01■□□□□ 0.31
LMNA-203ENST00000368297 SV2CQ496J9 727 aa17.01■□□□□ 0.31
LMNA-203ENST00000368297 NOMO2Q5JPE7 1267 aa17.01■□□□□ 0.31
LMNA-203ENST00000368297 VPS36Q86VN1 386 aa17.01■□□□□ 0.31
LMNA-203ENST00000368297 C7orf61Q8IZ16 206 aa17.01■□□□□ 0.31
LMNA-203ENST00000368297 RPUSD2Q8IZ73 545 aaKnown RBP17.01■□□□□ 0.31
LMNA-203ENST00000368297 FAXDC2Q96IV6 333 aa17.01■□□□□ 0.31
LMNA-203ENST00000368297 EIF3CQ99613 913 aaKnown RBP17.01■□□□□ 0.31
LMNA-203ENST00000368297 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP17.01■□□□□ 0.31
LMNA-203ENST00000368297 CISHQ9NSE2 258 aa17.01■□□□□ 0.31
LMNA-203ENST00000368297 DNAI1Q9UI46 699 aa17.01■□□□□ 0.31
LMNA-203ENST00000368297 SNX9Q9Y5X1 595 aa17.01■□□□□ 0.31
LMNA-203ENST00000368297 ALPK3Q96L96 1907 aa17.01■□□□□ 0.31
LMNA-203ENST00000368297 MICAL3Q7RTP6 2002 aa17.01■□□□□ 0.31
LMNA-203ENST00000368297 PODXLO00592 558 aa17.01■□□□□ 0.31
LMNA-203ENST00000368297 RIOK3O14730 519 aaKnown RBP17.01■□□□□ 0.31
LMNA-203ENST00000368297 INPPL1O15357 1258 aa17.01■□□□□ 0.31
LMNA-203ENST00000368297 HOXA2O43364 376 aa17.01■□□□□ 0.31
LMNA-203ENST00000368297 ACO1P21399 889 aaKnown RBP17.01■□□□□ 0.31
LMNA-203ENST00000368297 CASQ1P31415 396 aa17.01■□□□□ 0.31
LMNA-203ENST00000368297 KIF11P52732 1056 aa17.01■□□□□ 0.31
LMNA-203ENST00000368297 PTK2Q05397 1052 aa17.01■□□□□ 0.31
LMNA-203ENST00000368297 RNASELQ05823 741 aaKnown RBP17.01■□□□□ 0.31
LMNA-203ENST00000368297 TUSC3Q13454 348 aa17.01■□□□□ 0.31
LMNA-203ENST00000368297 SPA17Q15506 151 aa17.01■□□□□ 0.31
LMNA-203ENST00000368297 TMEM270Q6UE05 265 aa17.01■□□□□ 0.31
LMNA-203ENST00000368297 ZNF571Q7Z3V5 609 aaPredicted RBP17.01■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms