RNA–Protein interactions for RNA: ENST00000366595.7

NID1-202, Transcript of nidogen 1, humanhuman

TSL 1 (best) BASIC

Gene NID1, Length 5,412 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NID1-202ENST00000366595 FCGR1AP12314 374 aa17.51■□□□□ 0.39
NID1-202ENST00000366595 MLNP12872 115 aa17.51■□□□□ 0.39
NID1-202ENST00000366595 SYCP2LQ5T4T6 812 aa17.51■□□□□ 0.39
NID1-202ENST00000366595 C19orf18Q8NEA5 215 aa17.51■□□□□ 0.39
NID1-202ENST00000366595 NSUN6Q8TEA1 469 aaKnown RBP17.51■□□□□ 0.39
NID1-202ENST00000366595 LRRC39Q96DD0 335 aa17.51■□□□□ 0.39
NID1-202ENST00000366595 WNK4Q96J92 1243 aa17.51■□□□□ 0.39
NID1-202ENST00000366595 CD274Q9NZQ7 290 aa17.51■□□□□ 0.39
NID1-202ENST00000366595 SHANK2Q9UPX8 1470 aa17.51■□□□□ 0.39
NID1-202ENST00000366595 APRTP07741 180 aa17.51■□□□□ 0.39
NID1-202ENST00000366595 USP17L8P0C7I0 530 aa17.51■□□□□ 0.39
NID1-202ENST00000366595 RPS6P62753 249 aaKnown RBP17.51■□□□□ 0.39
NID1-202ENST00000366595 FAM98CQ17RN3 349 aaKnown RBP17.51■□□□□ 0.39
NID1-202ENST00000366595 COL23A1Q86Y22 540 aaPredicted RBP17.51■□□□□ 0.39
NID1-202ENST00000366595 DHX40Q8IX18 779 aaKnown RBP17.51■□□□□ 0.39
NID1-202ENST00000366595 C4orf33Q8N1A6 199 aa17.51■□□□□ 0.39
NID1-202ENST00000366595 SH2D3CQ8N5H7 860 aa17.51■□□□□ 0.39
NID1-202ENST00000366595 FAM45AQ8TCE6 357 aa17.51■□□□□ 0.39
NID1-202ENST00000366595 SERPINB12Q96P63 405 aa17.51■□□□□ 0.39
NID1-202ENST00000366595 RAB6BQ9NRW1 208 aa17.51■□□□□ 0.39
NID1-202ENST00000366595 ABCC10Q5T3U5 1492 aa17.51■□□□□ 0.39
NID1-202ENST00000366595 MLH1P40692 756 aa17.5■□□□□ 0.39
NID1-202ENST00000366595 RASGRP2Q7LDG7 609 aa17.5■□□□□ 0.39
NID1-202ENST00000366595 HERC5Q9UII4 1024 aaKnown RBP17.5■□□□□ 0.39
NID1-202ENST00000366595 HPS5Q9UPZ3 1129 aa17.5■□□□□ 0.39
NID1-202ENST00000366595 EMSYQ7Z589 1322 aa17.5■□□□□ 0.39
NID1-202ENST00000366595 PTPRTO14522 1441 aa17.5■□□□□ 0.39
NID1-202ENST00000366595 USP27XA6NNY8 438 aa17.5■□□□□ 0.39
NID1-202ENST00000366595 POTECB2RU33 542 aa17.5■□□□□ 0.39
NID1-202ENST00000366595 CYBBP04839 570 aa17.5■□□□□ 0.39
NID1-202ENST00000366595 RRM2P31350 389 aa17.5■□□□□ 0.39
NID1-202ENST00000366595 ARMC3Q5W041 872 aa17.5■□□□□ 0.39
NID1-202ENST00000366595 JADE3Q92613 823 aa17.5■□□□□ 0.39
NID1-202ENST00000366595 PPP1R16BQ96T49 567 aa17.5■□□□□ 0.39
NID1-202ENST00000366595 FAM217BQ9NTX9 383 aaPredicted RBP17.5■□□□□ 0.39
NID1-202ENST00000366595 NMRK1Q9NWW6 199 aa17.5■□□□□ 0.39
NID1-202ENST00000366595 MARCOQ9UEW3 520 aaPredicted RBP17.5■□□□□ 0.39
NID1-202ENST00000366595 MOCS2O96007 188 aaPredicted RBP17.5■□□□□ 0.39
NID1-202ENST00000366595 SIK2Q9H0K1 926 aa17.5■□□□□ 0.39
NID1-202ENST00000366595 ISCUQ9H1K1 167 aa17.5■□□□□ 0.39
NID1-202ENST00000366595 LATS2Q9NRM7 1088 aa17.5■□□□□ 0.39
NID1-202ENST00000366595 C6orf203Q9P0P8 240 aaPredicted RBP17.5■□□□□ 0.39
NID1-202ENST00000366595 CYP2D7A0A087X1C5 515 aa17.5■□□□□ 0.39
NID1-202ENST00000366595 SUPT3HB4E1H0 165 aa17.5■□□□□ 0.39
NID1-202ENST00000366595 F8W810 466 aa17.5■□□□□ 0.39
NID1-202ENST00000366595 CNOT3O75175 753 aaKnown RBP17.5■□□□□ 0.39
NID1-202ENST00000366595 ADORA2BP29275 332 aa17.5■□□□□ 0.39
NID1-202ENST00000366595 MAGEA4P43358 317 aa17.5■□□□□ 0.39
NID1-202ENST00000366595 CYB5D1Q6P9G0 228 aa17.5■□□□□ 0.39
NID1-202ENST00000366595 IKBIPQ70UQ0 350 aa17.5■□□□□ 0.39
NID1-202ENST00000366595 GLMNQ92990 594 aa17.5■□□□□ 0.39
NID1-202ENST00000366595 WDR24Q96S15 920 aa17.5■□□□□ 0.39
NID1-202ENST00000366595 RMDN3Q96TC7 470 aa17.5■□□□□ 0.39
NID1-202ENST00000366595 POLIQ9UNA4 740 aa17.5■□□□□ 0.39
NID1-202ENST00000366595 NCKAP5LQ9HCH0 1330 aa17.5■□□□□ 0.39
NID1-202ENST00000366595 TEX33O43247 280 aa17.5■□□□□ 0.39
NID1-202ENST00000366595 COG2Q14746 738 aa17.5■□□□□ 0.39
NID1-202ENST00000366595 EEPD1Q7L9B9 569 aa17.5■□□□□ 0.39
NID1-202ENST00000366595 ATPAF2Q8N5M1 289 aa17.5■□□□□ 0.39
NID1-202ENST00000366595 CCDC126Q96EE4 140 aa17.5■□□□□ 0.39
NID1-202ENST00000366595 MED15Q96RN5 788 aa17.5■□□□□ 0.39
NID1-202ENST00000366595 USP17L3A6NCW0 530 aa17.49■□□□□ 0.39
NID1-202ENST00000366595 USP17L4A6NCW7 530 aa17.49■□□□□ 0.39
NID1-202ENST00000366595 APBA3O96018 575 aa17.49■□□□□ 0.39
NID1-202ENST00000366595 FDX1P10109 184 aa17.49■□□□□ 0.39
NID1-202ENST00000366595 NPEPPSP55786 919 aa17.49■□□□□ 0.39
NID1-202ENST00000366595 PSMC6P62333 389 aa17.49■□□□□ 0.39
NID1-202ENST00000366595 CHRNB3Q05901 458 aa17.49■□□□□ 0.39
NID1-202ENST00000366595 USP17L1Q7RTZ2 530 aa17.49■□□□□ 0.39
NID1-202ENST00000366595 PPP1R36Q96LQ0 422 aa17.49■□□□□ 0.39
NID1-202ENST00000366595 CHMP2BQ9UQN3 213 aa17.49■□□□□ 0.39
NID1-202ENST00000366595 KPNA4O00629 521 aaPredicted RBP17.49■□□□□ 0.39
NID1-202ENST00000366595 TRIM65Q6PJ69 517 aa17.49■□□□□ 0.39
NID1-202ENST00000366595 TRAPPC11Q7Z392 1133 aa17.49■□□□□ 0.39
NID1-202ENST00000366595 HNRNPLLQ8WVV9 542 aaKnown RBP17.49■□□□□ 0.39
NID1-202ENST00000366595 RPAP3Q9H6T3 665 aaPredicted RBP17.49■□□□□ 0.39
NID1-202ENST00000366595 KRT84Q9NSB2 600 aa17.49■□□□□ 0.39
NID1-202ENST00000366595 AGO2Q9UKV8 859 aaKnown RBP17.49■□□□□ 0.39
NID1-202ENST00000366595 F5H423 210 aaPredicted RBP17.49■□□□□ 0.39
NID1-202ENST00000366595 TRIM66O15016 1216 aa17.49■□□□□ 0.39
NID1-202ENST00000366595 MMGT1Q8N4V1 131 aa17.49■□□□□ 0.39
NID1-202ENST00000366595 DCLRE1BQ9H816 532 aa17.49■□□□□ 0.39
NID1-202ENST00000366595 EIF3LQ9Y262 564 aaKnown RBP17.49■□□□□ 0.39
NID1-202ENST00000366595 SOAT2O75908 522 aa17.49■□□□□ 0.39
NID1-202ENST00000366595 PDK1Q15118 436 aa17.49■□□□□ 0.39
NID1-202ENST00000366595 HIST2H2ACQ16777 129 aaPredicted RBP17.49■□□□□ 0.39
NID1-202ENST00000366595 HIST2H2AA3Q6FI13 130 aa17.49■□□□□ 0.39
NID1-202ENST00000366595 JAMLQ86YT9 394 aa17.49■□□□□ 0.39
NID1-202ENST00000366595 SNX31Q8N9S9 440 aa17.49■□□□□ 0.39
NID1-202ENST00000366595 DYNLL2Q96FJ2 89 aa17.49■□□□□ 0.39
NID1-202ENST00000366595 CATSPER2Q96P56 530 aa17.49■□□□□ 0.39
NID1-202ENST00000366595 EFCAB1Q9HAE3 211 aa17.49■□□□□ 0.39
NID1-202ENST00000366595 HOXC10Q9NYD6 342 aa17.49■□□□□ 0.39
NID1-202ENST00000366595 MYO3BQ8WXR4 1341 aa17.48■□□□□ 0.39
NID1-202ENST00000366595 LMTK3Q96Q04 1460 aa17.48■□□□□ 0.39
NID1-202ENST00000366595 O00370 1275 aa17.48■□□□□ 0.39
NID1-202ENST00000366595 KCNQ3O43525 872 aa17.48■□□□□ 0.39
NID1-202ENST00000366595 FKBP6O75344 327 aa17.48■□□□□ 0.39
NID1-202ENST00000366595 RSBN1Q5VWQ0 802 aaPredicted RBP17.48■□□□□ 0.39
NID1-202ENST00000366595 LRRC8DQ7L1W4 858 aa17.48■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms