RNA–Protein interactions for RNA: ENST00000366304.3

HMGB1P39-201, Transcript of high mobility group box 1 pseudogene 39, humanhuman

BASIC

Gene HMGB1P39, Length 880 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P39-201ENST00000366304 LRG1P02750 347 aa9.39□□□□□ -0.91
HMGB1P39-201ENST00000366304 PRKCBP05771 671 aa9.39□□□□□ -0.91
HMGB1P39-201ENST00000366304 MYL4P12829 197 aa9.39□□□□□ -0.91
HMGB1P39-201ENST00000366304 CEACAM1P13688 526 aa9.39□□□□□ -0.91
HMGB1P39-201ENST00000366304 CPA1P15085 419 aa9.39□□□□□ -0.91
HMGB1P39-201ENST00000366304 YWHABP31946 246 aaKnown RBP9.39□□□□□ -0.91
HMGB1P39-201ENST00000366304 ARL2P36404 184 aa9.39□□□□□ -0.91
HMGB1P39-201ENST00000366304 CLCNKBP51801 687 aa9.39□□□□□ -0.91
HMGB1P39-201ENST00000366304 EPHA5P54756 1037 aa9.39□□□□□ -0.91
HMGB1P39-201ENST00000366304 ARPP19P56211 112 aa9.39□□□□□ -0.91
HMGB1P39-201ENST00000366304 COPS2P61201 443 aa9.39□□□□□ -0.91
HMGB1P39-201ENST00000366304 SOX4Q06945 474 aaPredicted RBP9.39□□□□□ -0.91
HMGB1P39-201ENST00000366304 PPP2R5CQ13362 524 aa9.39□□□□□ -0.91
HMGB1P39-201ENST00000366304 NTRK3Q16288 839 aa9.39□□□□□ -0.91
HMGB1P39-201ENST00000366304 XKR9Q5GH70 373 aa9.39□□□□□ -0.91
HMGB1P39-201ENST00000366304 GLRA4Q5JXX5 417 aa9.39□□□□□ -0.91
HMGB1P39-201ENST00000366304 DGKKQ5KSL6 1271 aa9.39□□□□□ -0.91
HMGB1P39-201ENST00000366304 EEF1DP3Q658K8 133 aa9.39□□□□□ -0.91
HMGB1P39-201ENST00000366304 NAIF1Q69YI7 327 aaPredicted RBP9.39□□□□□ -0.91
HMGB1P39-201ENST00000366304 FSTL4Q6MZW2 842 aa9.39□□□□□ -0.91
HMGB1P39-201ENST00000366304 PDZD4Q76G19 769 aaPredicted RBP9.39□□□□□ -0.91
HMGB1P39-201ENST00000366304 NOSTRINQ8IVI9 506 aa9.39□□□□□ -0.91
HMGB1P39-201ENST00000366304 TCEAL8Q8IYN2 117 aa9.39□□□□□ -0.91
HMGB1P39-201ENST00000366304 TMEM130Q8N3G9 435 aa9.39□□□□□ -0.91
HMGB1P39-201ENST00000366304 TCP11Q8WWU5 503 aa9.39□□□□□ -0.91
HMGB1P39-201ENST00000366304 LXNQ9BS40 222 aa9.39□□□□□ -0.91
HMGB1P39-201ENST00000366304 PDZD7Q9H5P4 517 aa9.39□□□□□ -0.91
HMGB1P39-201ENST00000366304 CYP4F11Q9HBI6 524 aa9.39□□□□□ -0.91
HMGB1P39-201ENST00000366304 FBRSL1Q9HCM7 1045 aaKnown RBP9.39□□□□□ -0.91
HMGB1P39-201ENST00000366304 NAV2Q8IVL1 2488 aa9.38□□□□□ -0.91
HMGB1P39-201ENST00000366304 SPAG17Q6Q759 2223 aa9.38□□□□□ -0.91
HMGB1P39-201ENST00000366304 SPAARA0A1B0GVQ0 90 aa9.38□□□□□ -0.91
HMGB1P39-201ENST00000366304 TMEM189-UBE2V1I3L0A0 370 aa9.38□□□□□ -0.91
HMGB1P39-201ENST00000366304 PRRG1O14668 218 aa9.38□□□□□ -0.91
HMGB1P39-201ENST00000366304 ZNF197O14709 1029 aa9.38□□□□□ -0.91
HMGB1P39-201ENST00000366304 CHADO15335 359 aa9.38□□□□□ -0.91
HMGB1P39-201ENST00000366304 B3GAT3O94766 335 aa9.38□□□□□ -0.91
HMGB1P39-201ENST00000366304 CAVIN2O95810 425 aa9.38□□□□□ -0.91
HMGB1P39-201ENST00000366304 THP07101 528 aa9.38□□□□□ -0.91
HMGB1P39-201ENST00000366304 P4HBP07237 508 aaKnown RBP9.38□□□□□ -0.91
HMGB1P39-201ENST00000366304 CCDC192P0DO97 292 aa9.38□□□□□ -0.91
HMGB1P39-201ENST00000366304 ATF2P15336 505 aa9.38□□□□□ -0.91
HMGB1P39-201ENST00000366304 CSRP1P21291 193 aaKnown RBP9.38□□□□□ -0.91
HMGB1P39-201ENST00000366304 GNA11P29992 359 aa9.38□□□□□ -0.91
HMGB1P39-201ENST00000366304 CREB5Q02930 508 aa9.38□□□□□ -0.91
HMGB1P39-201ENST00000366304 POU5F1BQ06416 359 aa9.38□□□□□ -0.91
HMGB1P39-201ENST00000366304 ELAVL2Q12926 359 aaKnown RBP9.38□□□□□ -0.91
HMGB1P39-201ENST00000366304 CTTNQ14247 550 aaKnown RBP9.38□□□□□ -0.91
HMGB1P39-201ENST00000366304 PCBP1Q15365 356 aaKnown RBP eCLIP9.38□□□□□ -0.91
HMGB1P39-201ENST00000366304 UPP1Q16831 310 aa9.38□□□□□ -0.91
HMGB1P39-201ENST00000366304 COL28A1Q2UY09 1125 aa9.38□□□□□ -0.91
HMGB1P39-201ENST00000366304 PDXDC1Q6P996 788 aa9.38□□□□□ -0.91
HMGB1P39-201ENST00000366304 RALGPS2Q86X27 583 aaPredicted RBP9.38□□□□□ -0.91
HMGB1P39-201ENST00000366304 PROSER1Q86XN7 944 aa9.38□□□□□ -0.91
HMGB1P39-201ENST00000366304 TMC8Q8IU68 726 aa9.38□□□□□ -0.91
HMGB1P39-201ENST00000366304 C4orf19Q8IY42 314 aa9.38□□□□□ -0.91
HMGB1P39-201ENST00000366304 CSGALNACT1Q8TDX6 532 aa9.38□□□□□ -0.91
HMGB1P39-201ENST00000366304 HAS1Q92839 578 aa9.38□□□□□ -0.91
HMGB1P39-201ENST00000366304 DYDC2Q96IM9 177 aa9.38□□□□□ -0.91
HMGB1P39-201ENST00000366304 PPP1R10Q96QC0 940 aaKnown RBP9.38□□□□□ -0.91
HMGB1P39-201ENST00000366304 HHIPQ96QV1 700 aa9.38□□□□□ -0.91
HMGB1P39-201ENST00000366304 CRISPLD1Q9H336 500 aa9.38□□□□□ -0.91
HMGB1P39-201ENST00000366304 C8orf33Q9H7E9 229 aaPredicted RBP9.38□□□□□ -0.91
HMGB1P39-201ENST00000366304 IL21Q9HBE4 155 aa9.38□□□□□ -0.91
HMGB1P39-201ENST00000366304 KCNMB3Q9NPA1 279 aa9.38□□□□□ -0.91
HMGB1P39-201ENST00000366304 GPRC5CQ9NQ84 441 aa9.38□□□□□ -0.91
HMGB1P39-201ENST00000366304 INVSQ9Y283 1065 aa9.38□□□□□ -0.91
HMGB1P39-201ENST00000366304 MSRB2Q9Y3D2 182 aa9.38□□□□□ -0.91
HMGB1P39-201ENST00000366304 NEUROG3Q9Y4Z2 214 aa9.38□□□□□ -0.91
HMGB1P39-201ENST00000366304 ADAMTS20P59510 1910 aa9.38□□□□□ -0.91
HMGB1P39-201ENST00000366304 PDCD11Q14690 1871 aaKnown RBP9.37□□□□□ -0.91
HMGB1P39-201ENST00000366304 CCDC163A0A0D9SF12 145 aa9.37□□□□□ -0.91
HMGB1P39-201ENST00000366304 A0A1W2PRU2 124 aa9.37□□□□□ -0.91
HMGB1P39-201ENST00000366304 ANTXRLA6NF34 631 aa9.37□□□□□ -0.91
HMGB1P39-201ENST00000366304 MEFVO15553 781 aaPredicted RBP9.37□□□□□ -0.91
HMGB1P39-201ENST00000366304 AKAP3O75969 853 aa9.37□□□□□ -0.91
HMGB1P39-201ENST00000366304 PRAMEF12O95522 483 aa9.37□□□□□ -0.91
HMGB1P39-201ENST00000366304 FAM193AP78312 1265 aa9.37□□□□□ -0.91
HMGB1P39-201ENST00000366304 IRX4P78413 519 aa9.37□□□□□ -0.91
HMGB1P39-201ENST00000366304 CYP4A11Q02928 519 aa9.37□□□□□ -0.91
HMGB1P39-201ENST00000366304 TWF1Q12792 350 aa9.37□□□□□ -0.91
HMGB1P39-201ENST00000366304 MRPL58Q14197 206 aaKnown RBP9.37□□□□□ -0.91
HMGB1P39-201ENST00000366304 MXD4Q14582 209 aaPredicted RBP9.37□□□□□ -0.91
HMGB1P39-201ENST00000366304 ANKS3Q6ZW76 656 aa9.37□□□□□ -0.91
HMGB1P39-201ENST00000366304 DHX32Q7L7V1 743 aaKnown RBP9.37□□□□□ -0.91
HMGB1P39-201ENST00000366304 HACE1Q8IYU2 909 aa9.37□□□□□ -0.91
HMGB1P39-201ENST00000366304 ADAM32Q8TC27 787 aa9.37□□□□□ -0.91
HMGB1P39-201ENST00000366304 ZNF516Q92618 1163 aa9.37□□□□□ -0.91
HMGB1P39-201ENST00000366304 EZH1Q92800 747 aaPredicted RBP9.37□□□□□ -0.91
HMGB1P39-201ENST00000366304 MSANTD3Q96H12 275 aa9.37□□□□□ -0.91
HMGB1P39-201ENST00000366304 NFKBIZQ9BYH8 718 aa9.37□□□□□ -0.91
HMGB1P39-201ENST00000366304 DNAJC25Q9H1X3 360 aa9.37□□□□□ -0.91
HMGB1P39-201ENST00000366304 DDX25Q9UHL0 483 aaKnown RBP9.37□□□□□ -0.91
HMGB1P39-201ENST00000366304 FBXL5Q9UKA1 691 aa9.37□□□□□ -0.91
HMGB1P39-201ENST00000366304 PPME1Q9Y570 386 aa9.37□□□□□ -0.91
HMGB1P39-201ENST00000366304 ARID2Q68CP9 1835 aa9.36□□□□□ -0.91
HMGB1P39-201ENST00000366304 SLITRK3O94933 977 aa9.36□□□□□ -0.91
HMGB1P39-201ENST00000366304 EGFP01133 1207 aa9.36□□□□□ -0.91
HMGB1P39-201ENST00000366304 NCBP1Q09161 790 aaKnown RBP9.36□□□□□ -0.91
HMGB1P39-201ENST00000366304 UAP1L1Q3KQV9 507 aa9.36□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 41.4 ms