RNA–Protein interactions for RNA: ENST00000366216.6

CSNK1E-202, Transcript of casein kinase 1 epsilon, humanhuman

TSL 2

Gene CSNK1E, Length 1,005 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1E-202ENST00000366216 CCZ1BP86790 482 aa12.2□□□□□ -0.46
CSNK1E-202ENST00000366216 CCZ1P86791 482 aaPredicted RBP12.2□□□□□ -0.46
CSNK1E-202ENST00000366216 UBXN1Q04323 297 aa12.2□□□□□ -0.46
CSNK1E-202ENST00000366216 ADAM9Q13443 819 aa12.2□□□□□ -0.46
CSNK1E-202ENST00000366216 MYBPC2Q14324 1141 aa12.2□□□□□ -0.46
CSNK1E-202ENST00000366216 ARID5BQ14865 1188 aa12.2□□□□□ -0.46
CSNK1E-202ENST00000366216 VWA3BQ502W6 1294 aa12.2□□□□□ -0.46
CSNK1E-202ENST00000366216 MIIPQ5JXC2 388 aa12.2□□□□□ -0.46
CSNK1E-202ENST00000366216 DCLRE1AQ6PJP8 1040 aa12.2□□□□□ -0.46
CSNK1E-202ENST00000366216 CREBRFQ8IUR6 639 aa12.2□□□□□ -0.46
CSNK1E-202ENST00000366216 LINC01465Q8N7H1 131 aa12.2□□□□□ -0.46
CSNK1E-202ENST00000366216 ST13P5Q8NFI4 369 aaPredicted RBP12.2□□□□□ -0.46
CSNK1E-202ENST00000366216 GOLGA5Q8TBA6 731 aa12.2□□□□□ -0.46
CSNK1E-202ENST00000366216 HELQQ8TDG4 1101 aa12.2□□□□□ -0.46
CSNK1E-202ENST00000366216 TMEM174Q8WUU8 243 aa12.2□□□□□ -0.46
CSNK1E-202ENST00000366216 SPIRE2Q8WWL2 714 aa12.2□□□□□ -0.46
CSNK1E-202ENST00000366216 ATRIPQ8WXE1 791 aa12.2□□□□□ -0.46
CSNK1E-202ENST00000366216 KCNN1Q92952 543 aa12.2□□□□□ -0.46
CSNK1E-202ENST00000366216 NXPE3Q969Y0 559 aa12.2□□□□□ -0.46
CSNK1E-202ENST00000366216 FAM167AQ96KS9 214 aa12.2□□□□□ -0.46
CSNK1E-202ENST00000366216 FOXQ1Q9C009 403 aa12.2□□□□□ -0.46
CSNK1E-202ENST00000366216 ADAMTS10Q9H324 1103 aa12.2□□□□□ -0.46
CSNK1E-202ENST00000366216 TMEM206Q9H813 350 aa12.2□□□□□ -0.46
CSNK1E-202ENST00000366216 POLD4Q9HCU8 107 aa12.2□□□□□ -0.46
CSNK1E-202ENST00000366216 RRAGDQ9NQL2 400 aaPredicted RBP12.2□□□□□ -0.46
CSNK1E-202ENST00000366216 NRBP2Q9NSY0 501 aa12.2□□□□□ -0.46
CSNK1E-202ENST00000366216 CGNQ9P2M7 1197 aaKnown RBP12.2□□□□□ -0.46
CSNK1E-202ENST00000366216 EPS15L1Q9UBC2 864 aa12.2□□□□□ -0.46
CSNK1E-202ENST00000366216 SEPT9Q9UHD8 586 aaPredicted RBP12.2□□□□□ -0.46
CSNK1E-202ENST00000366216 FBXO4Q9UKT5 387 aa12.2□□□□□ -0.46
CSNK1E-202ENST00000366216 USP18Q9UMW8 372 aa12.2□□□□□ -0.46
CSNK1E-202ENST00000366216 PCDHGA2Q9Y5H1 932 aa12.2□□□□□ -0.46
CSNK1E-202ENST00000366216 NOTCH4Q99466 2003 aa12.2□□□□□ -0.46
CSNK1E-202ENST00000366216 SPEGQ15772 3267 aa12.19□□□□□ -0.46
CSNK1E-202ENST00000366216 SETXQ7Z333 2677 aaKnown RBP12.19□□□□□ -0.46
CSNK1E-202ENST00000366216 MEIS3P2A8K0S8 358 aa12.19□□□□□ -0.46
CSNK1E-202ENST00000366216 SLC16A3O15427 465 aaKnown RBP12.19□□□□□ -0.46
CSNK1E-202ENST00000366216 TGFB1I1O43294 461 aa12.19□□□□□ -0.46
CSNK1E-202ENST00000366216 HBP1O60381 514 aa12.19□□□□□ -0.46
CSNK1E-202ENST00000366216 ZC3H11AO75152 810 aaKnown RBP eCLIP12.19□□□□□ -0.46
CSNK1E-202ENST00000366216 ZSCAN20P17040 1043 aaPredicted RBP12.19□□□□□ -0.46
CSNK1E-202ENST00000366216 SCP2P22307 547 aa12.19□□□□□ -0.46
CSNK1E-202ENST00000366216 NR2F2P24468 414 aa12.19□□□□□ -0.46
CSNK1E-202ENST00000366216 ABCD1P33897 745 aa12.19□□□□□ -0.46
CSNK1E-202ENST00000366216 CLCN1P35523 988 aa12.19□□□□□ -0.46
CSNK1E-202ENST00000366216 CLCN4P51793 760 aa12.19□□□□□ -0.46
CSNK1E-202ENST00000366216 GTF2BQ00403 316 aa12.19□□□□□ -0.46
CSNK1E-202ENST00000366216 TARBP2Q15633 366 aaKnown RBP12.19□□□□□ -0.46
CSNK1E-202ENST00000366216 PTPN14Q15678 1187 aa12.19□□□□□ -0.46
CSNK1E-202ENST00000366216 PPM1JQ5JR12 505 aa12.19□□□□□ -0.46
CSNK1E-202ENST00000366216 HS2ST1Q7LGA3 356 aa12.19□□□□□ -0.46
CSNK1E-202ENST00000366216 SLC9A9Q8IVB4 645 aa12.19□□□□□ -0.46
CSNK1E-202ENST00000366216 HVCN1Q96D96 273 aa12.19□□□□□ -0.46
CSNK1E-202ENST00000366216 IQCDQ96DY2 449 aa12.19□□□□□ -0.46
CSNK1E-202ENST00000366216 CCDC51Q96ER9 411 aa12.19□□□□□ -0.46
CSNK1E-202ENST00000366216 IGSF21Q96ID5 467 aa12.19□□□□□ -0.46
CSNK1E-202ENST00000366216 ERGIC2Q96RQ1 377 aa12.19□□□□□ -0.46
CSNK1E-202ENST00000366216 NTPCRQ9BSD7 190 aaKnown RBP12.19□□□□□ -0.46
CSNK1E-202ENST00000366216 NUP58Q9BVL2 599 aa12.19□□□□□ -0.46
CSNK1E-202ENST00000366216 EPC1Q9H2F5 836 aa12.19□□□□□ -0.46
CSNK1E-202ENST00000366216 SPATA6Q9NWH7 488 aaPredicted RBP12.19□□□□□ -0.46
CSNK1E-202ENST00000366216 PYCARDQ9ULZ3 195 aa12.19□□□□□ -0.46
CSNK1E-202ENST00000366216 SMG5Q9UPR3 1016 aaKnown RBP12.19□□□□□ -0.46
CSNK1E-202ENST00000366216 NBEAQ8NFP9 2946 aa12.19□□□□□ -0.46
CSNK1E-202ENST00000366216 ZMYM2Q9UBW7 1377 aa12.18□□□□□ -0.46
CSNK1E-202ENST00000366216 CLUHO75153 1309 aa12.18□□□□□ -0.46
CSNK1E-202ENST00000366216 AKR1B15C9JRZ8 316 aaPredicted RBP12.18□□□□□ -0.46
CSNK1E-202ENST00000366216 K7ENM7 598 aa12.18□□□□□ -0.46
CSNK1E-202ENST00000366216 LAMTOR5O43504 91 aa12.18□□□□□ -0.46
CSNK1E-202ENST00000366216 LILRB3O75022 631 aa12.18□□□□□ -0.46
CSNK1E-202ENST00000366216 CSDE1O75534 798 aaKnown RBP12.18□□□□□ -0.46
CSNK1E-202ENST00000366216 NR3C1P04150 777 aa12.18□□□□□ -0.46
CSNK1E-202ENST00000366216 TPM1P09493 284 aa12.18□□□□□ -0.46
CSNK1E-202ENST00000366216 SKILP12757 684 aa12.18□□□□□ -0.46
CSNK1E-202ENST00000366216 TGM1P22735 817 aa12.18□□□□□ -0.46
CSNK1E-202ENST00000366216 KLRC2P26717 231 aa12.18□□□□□ -0.46
CSNK1E-202ENST00000366216 RFC5P40937 340 aa12.18□□□□□ -0.46
CSNK1E-202ENST00000366216 CLCN3P51790 818 aa12.18□□□□□ -0.46
CSNK1E-202ENST00000366216 SMTNP53814 917 aa12.18□□□□□ -0.46
CSNK1E-202ENST00000366216 STARD6P59095 220 aa12.18□□□□□ -0.46
CSNK1E-202ENST00000366216 PPP2R3AQ06190 1150 aa12.18□□□□□ -0.46
CSNK1E-202ENST00000366216 DMP1Q13316 513 aaPredicted RBP12.18□□□□□ -0.46
CSNK1E-202ENST00000366216 CCDC40Q4G0X9 1142 aa12.18□□□□□ -0.46
CSNK1E-202ENST00000366216 ZC2HC1CQ53FD0 456 aaPredicted RBP12.18□□□□□ -0.46
CSNK1E-202ENST00000366216 FIGNQ5HY92 759 aa12.18□□□□□ -0.46
CSNK1E-202ENST00000366216 FKBP15Q5T1M5 1219 aa12.18□□□□□ -0.46
CSNK1E-202ENST00000366216 MAEAQ7L5Y9 396 aa12.18□□□□□ -0.46
CSNK1E-202ENST00000366216 TRIM59Q8IWR1 403 aa12.18□□□□□ -0.46
CSNK1E-202ENST00000366216 C12orf56Q8IXR9 622 aa12.18□□□□□ -0.46
CSNK1E-202ENST00000366216 TC2NQ8N9U0 490 aa12.18□□□□□ -0.46
CSNK1E-202ENST00000366216 EEF2KMTQ96G04 330 aa12.18□□□□□ -0.46
CSNK1E-202ENST00000366216 ACCSQ96QU6 501 aa12.18□□□□□ -0.46
CSNK1E-202ENST00000366216 PANX2Q96RD6 677 aa12.18□□□□□ -0.46
CSNK1E-202ENST00000366216 MYADMQ96S97 322 aa12.18□□□□□ -0.46
CSNK1E-202ENST00000366216 CEP89Q96ST8 783 aa12.18□□□□□ -0.46
CSNK1E-202ENST00000366216 MKNK1Q9BUB5 465 aa12.18□□□□□ -0.46
CSNK1E-202ENST00000366216 EMILIN2Q9BXX0 1053 aa12.18□□□□□ -0.46
CSNK1E-202ENST00000366216 GBP3Q9H0R5 595 aa12.18□□□□□ -0.46
CSNK1E-202ENST00000366216 NDST4Q9H3R1 872 aa12.18□□□□□ -0.46
CSNK1E-202ENST00000366216 DHX33Q9H6R0 707 aaKnown RBP12.18□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms