RNA–Protein interactions for RNA: ENST00000364738.1

RNU4-42P-201, Transcript of RNA, U4 small nuclear 42, pseudogene, humanhuman

BASIC

Gene RNU4-42P, Length 142 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4-42P-201ENST00000364738 CNGA1P29973 690 aa3.25□□□□□ -1.89
RNU4-42P-201ENST00000364738 ANXA11P50995 505 aaKnown RBP3.25□□□□□ -1.89
RNU4-42P-201ENST00000364738 MC2RQ01718 297 aa3.25□□□□□ -1.89
RNU4-42P-201ENST00000364738 TARDBPQ13148 414 aaKnown RBP eCLIP3.25□□□□□ -1.89
RNU4-42P-201ENST00000364738 CLUL1Q15846 466 aa3.25□□□□□ -1.89
RNU4-42P-201ENST00000364738 TXNRD1Q16881 649 aa3.25□□□□□ -1.89
RNU4-42P-201ENST00000364738 PABPC1LQ4VXU2 614 aaKnown RBP3.25□□□□□ -1.89
RNU4-42P-201ENST00000364738 UTP14CQ5TAP6 766 aaKnown RBP3.25□□□□□ -1.89
RNU4-42P-201ENST00000364738 FCRLBQ6BAA4 426 aa3.25□□□□□ -1.89
RNU4-42P-201ENST00000364738 MICALCLQ6ZW33 695 aa3.25□□□□□ -1.89
RNU4-42P-201ENST00000364738 MIGA2Q7L4E1 593 aa3.25□□□□□ -1.89
RNU4-42P-201ENST00000364738 BHLHA9Q7RTU4 235 aa3.25□□□□□ -1.89
RNU4-42P-201ENST00000364738 C1QL2Q7Z5L3 287 aa3.25□□□□□ -1.89
RNU4-42P-201ENST00000364738 ADGRG5Q8IZF4 528 aa3.25□□□□□ -1.89
RNU4-42P-201ENST00000364738 B3GALNT2Q8NCR0 500 aa3.25□□□□□ -1.89
RNU4-42P-201ENST00000364738 WDR66Q8TBY9 1149 aa3.25□□□□□ -1.89
RNU4-42P-201ENST00000364738 DDB2Q92466 427 aa3.25□□□□□ -1.89
RNU4-42P-201ENST00000364738 ZNF778Q96MU6 729 aa3.25□□□□□ -1.89
RNU4-42P-201ENST00000364738 C1QTNF7Q9BXJ2 289 aa3.25□□□□□ -1.89
RNU4-42P-201ENST00000364738 TDP1Q9NUW8 608 aa3.25□□□□□ -1.89
RNU4-42P-201ENST00000364738 CTTNBP2NLQ9P2B4 639 aa3.25□□□□□ -1.89
RNU4-42P-201ENST00000364738 ZNF70Q9UC06 446 aaPredicted RBP3.25□□□□□ -1.89
RNU4-42P-201ENST00000364738 SAP30BPQ9UHR5 308 aaKnown RBP3.25□□□□□ -1.89
RNU4-42P-201ENST00000364738 NEU2Q9Y3R4 380 aa3.25□□□□□ -1.89
RNU4-42P-201ENST00000364738 WNT6Q9Y6F9 365 aa3.25□□□□□ -1.89
RNU4-42P-201ENST00000364738 COL3A1P02461 1466 aaPredicted RBP3.24□□□□□ -1.89
RNU4-42P-201ENST00000364738 CCDC195A0A1B0GUA6 201 aa3.24□□□□□ -1.89
RNU4-42P-201ENST00000364738 WDR91A4D1P6 747 aa3.24□□□□□ -1.89
RNU4-42P-201ENST00000364738 URI1O94763 535 aaPredicted RBP3.24□□□□□ -1.89
RNU4-42P-201ENST00000364738 PRKCGP05129 697 aa3.24□□□□□ -1.89
RNU4-42P-201ENST00000364738 CD1AP06126 327 aa3.24□□□□□ -1.89
RNU4-42P-201ENST00000364738 ELFN1P0C7U0 828 aa3.24□□□□□ -1.89
RNU4-42P-201ENST00000364738 PPP3CBP16298 524 aa3.24□□□□□ -1.89
RNU4-42P-201ENST00000364738 MASP1P48740 699 aa3.24□□□□□ -1.89
RNU4-42P-201ENST00000364738 SOX10P56693 466 aa3.24□□□□□ -1.89
RNU4-42P-201ENST00000364738 ERVK-21P61565 698 aa3.24□□□□□ -1.89
RNU4-42P-201ENST00000364738 PIGFQ07326 219 aa3.24□□□□□ -1.89
RNU4-42P-201ENST00000364738 KLF1Q13351 362 aaPredicted RBP3.24□□□□□ -1.89
RNU4-42P-201ENST00000364738 DYRK1AQ13627 763 aa3.24□□□□□ -1.89
RNU4-42P-201ENST00000364738 PTPRRQ15256 657 aa3.24□□□□□ -1.89
RNU4-42P-201ENST00000364738 EZH2Q15910 746 aaKnown RBP3.24□□□□□ -1.89
RNU4-42P-201ENST00000364738 SRSF7Q16629 238 aaKnown RBP eCLIP3.24□□□□□ -1.89
RNU4-42P-201ENST00000364738 KIAA1614Q5VZ46 1190 aa3.24□□□□□ -1.89
RNU4-42P-201ENST00000364738 ZNF365Q70YC5 407 aa3.24□□□□□ -1.89
RNU4-42P-201ENST00000364738 NSUN7Q8NE18 718 aaKnown RBP3.24□□□□□ -1.89
RNU4-42P-201ENST00000364738 DPF1Q92782 380 aa3.24□□□□□ -1.89
RNU4-42P-201ENST00000364738 PGBD1Q96JS3 809 aa3.24□□□□□ -1.89
RNU4-42P-201ENST00000364738 KLHL32Q96NJ5 620 aa3.24□□□□□ -1.89
RNU4-42P-201ENST00000364738 IMPG2Q9BZV3 1241 aa3.24□□□□□ -1.89
RNU4-42P-201ENST00000364738 VSX1Q9NZR4 365 aaPredicted RBP3.24□□□□□ -1.89
RNU4-42P-201ENST00000364738 JKAMPQ9P055 326 aa3.24□□□□□ -1.89
RNU4-42P-201ENST00000364738 ST3GAL5Q9UNP4 418 aa3.24□□□□□ -1.89
RNU4-42P-201ENST00000364738 SUN1O94901 812 aa3.23□□□□□ -1.89
RNU4-42P-201ENST00000364738 CELA2AP08217 269 aa3.23□□□□□ -1.89
RNU4-42P-201ENST00000364738 ITPKBP27987 946 aa3.23□□□□□ -1.89
RNU4-42P-201ENST00000364738 WASP42768 502 aa3.23□□□□□ -1.89
RNU4-42P-201ENST00000364738 CDC42EP1Q00587 391 aa3.23□□□□□ -1.89
RNU4-42P-201ENST00000364738 ITIH3Q06033 890 aa3.23□□□□□ -1.89
RNU4-42P-201ENST00000364738 FAM153CQ494X1 144 aa3.23□□□□□ -1.89
RNU4-42P-201ENST00000364738 TAPT1Q6NXT6 567 aa3.23□□□□□ -1.89
RNU4-42P-201ENST00000364738 CFAP52Q8N1V2 620 aa3.23□□□□□ -1.89
RNU4-42P-201ENST00000364738 PDPRQ8NCN5 879 aa3.23□□□□□ -1.89
RNU4-42P-201ENST00000364738 TMIEQ8NEW7 156 aa3.23□□□□□ -1.89
RNU4-42P-201ENST00000364738 IFI44Q8TCB0 444 aa3.23□□□□□ -1.89
RNU4-42P-201ENST00000364738 SSH1Q8WYL5 1049 aa3.23□□□□□ -1.89
RNU4-42P-201ENST00000364738 HAPLN3Q96S86 360 aa3.23□□□□□ -1.89
RNU4-42P-201ENST00000364738 PCDHA13Q9Y5I0 950 aa3.23□□□□□ -1.89
RNU4-42P-201ENST00000364738 NR2E3Q9Y5X4 410 aa3.23□□□□□ -1.89
RNU4-42P-201ENST00000364738 TRIM75PA6NK02 468 aa3.22□□□□□ -1.89
RNU4-42P-201ENST00000364738 GCOM1H8Y6P7 765 aaPredicted RBP3.22□□□□□ -1.89
RNU4-42P-201ENST00000364738 K7ESF4 209 aa3.22□□□□□ -1.89
RNU4-42P-201ENST00000364738 TTLL1O95922 423 aa3.22□□□□□ -1.89
RNU4-42P-201ENST00000364738 HSD3B2P26439 372 aa3.22□□□□□ -1.89
RNU4-42P-201ENST00000364738 SLC16A1P53985 500 aa3.22□□□□□ -1.89
RNU4-42P-201ENST00000364738 NXPH1P58417 271 aa3.22□□□□□ -1.89
RNU4-42P-201ENST00000364738 SLC10A2Q12908 348 aaPredicted RBP3.22□□□□□ -1.89
RNU4-42P-201ENST00000364738 HLXQ14774 488 aaPredicted RBP3.22□□□□□ -1.89
RNU4-42P-201ENST00000364738 FLYWCH1Q4VC44 716 aa3.22□□□□□ -1.89
RNU4-42P-201ENST00000364738 RNF219Q5W0B1 726 aaPredicted RBP3.22□□□□□ -1.89
RNU4-42P-201ENST00000364738 GADL1Q6ZQY3 521 aa3.22□□□□□ -1.89
RNU4-42P-201ENST00000364738 RASAL3Q86YV0 1011 aa3.22□□□□□ -1.89
RNU4-42P-201ENST00000364738 AOPEPQ8N6M6 819 aa3.22□□□□□ -1.89
RNU4-42P-201ENST00000364738 IL17RDQ8NFM7 739 aa3.22□□□□□ -1.89
RNU4-42P-201ENST00000364738 ATL2Q8NHH9 583 aa3.22□□□□□ -1.89
RNU4-42P-201ENST00000364738 HDAC10Q969S8 669 aa3.22□□□□□ -1.89
RNU4-42P-201ENST00000364738 ADAM21Q9UKJ8 722 aa3.22□□□□□ -1.89
RNU4-42P-201ENST00000364738 PADI4Q9UM07 663 aa3.22□□□□□ -1.89
RNU4-42P-201ENST00000364738 SLC45A2Q9UMX9 530 aa3.22□□□□□ -1.89
RNU4-42P-201ENST00000364738 TMA7Q9Y2S6 64 aaKnown RBP3.22□□□□□ -1.89
RNU4-42P-201ENST00000364738 A0A0B4J269 797 aa3.21□□□□□ -1.9
RNU4-42P-201ENST00000364738 TLDC2A0PJX2 215 aa3.21□□□□□ -1.9
RNU4-42P-201ENST00000364738 WDR27A2RRH5 827 aa3.21□□□□□ -1.9
RNU4-42P-201ENST00000364738 LINC01548A6NM66 108 aa3.21□□□□□ -1.9
RNU4-42P-201ENST00000364738 VWC2LB2RUY7 222 aa3.21□□□□□ -1.9
RNU4-42P-201ENST00000364738 PROB1E7EW31 1015 aa3.21□□□□□ -1.9
RNU4-42P-201ENST00000364738 SGTAO43765 313 aa3.21□□□□□ -1.9
RNU4-42P-201ENST00000364738 NDUFS2O75306 463 aa3.21□□□□□ -1.9
RNU4-42P-201ENST00000364738 SLC43A1O75387 559 aa3.21□□□□□ -1.9
RNU4-42P-201ENST00000364738 RHOP08100 348 aa3.21□□□□□ -1.9
RNU4-42P-201ENST00000364738 VIL1P09327 827 aaKnown RBP3.21□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms