RNA–Protein interactions for RNA: ENST00000364047.1

RNU6-553P-201, Transcript of RNA, U6 small nuclear 553, pseudogene, humanhuman

BASIC

Gene RNU6-553P, Length 96 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-553P-201ENST00000364047 PLA2G5P39877 138 aa5.32□□□□□ -1.56
RNU6-553P-201ENST00000364047 MPLP40238 635 aa5.32□□□□□ -1.56
RNU6-553P-201ENST00000364047 NANOS3P60323 173 aaKnown RBP5.32□□□□□ -1.56
RNU6-553P-201ENST00000364047 GNAI1P63096 354 aa5.32□□□□□ -1.56
RNU6-553P-201ENST00000364047 Q6ZNX1 250 aa5.32□□□□□ -1.56
RNU6-553P-201ENST00000364047 USP45Q70EL2 814 aa5.32□□□□□ -1.56
RNU6-553P-201ENST00000364047 CLNKQ7Z7G1 428 aa5.32□□□□□ -1.56
RNU6-553P-201ENST00000364047 CATIPQ7Z7H3 387 aa5.32□□□□□ -1.56
RNU6-553P-201ENST00000364047 DNAJC10Q8IXB1 793 aa5.32□□□□□ -1.56
RNU6-553P-201ENST00000364047 Q8NA96 180 aa5.32□□□□□ -1.56
RNU6-553P-201ENST00000364047 PDPRQ8NCN5 879 aa5.32□□□□□ -1.56
RNU6-553P-201ENST00000364047 SLC17A8Q8NDX2 589 aa5.32□□□□□ -1.56
RNU6-553P-201ENST00000364047 RGMAQ96B86 450 aa5.32□□□□□ -1.56
RNU6-553P-201ENST00000364047 AIFM2Q9BRQ8 373 aa5.32□□□□□ -1.56
RNU6-553P-201ENST00000364047 RIOX1Q9H6W3 641 aa5.32□□□□□ -1.56
RNU6-553P-201ENST00000364047 SLAMF7Q9NQ25 335 aa5.32□□□□□ -1.56
RNU6-553P-201ENST00000364047 TYW1Q9NV66 732 aaKnown RBP5.32□□□□□ -1.56
RNU6-553P-201ENST00000364047 GNL3LQ9NVN8 582 aaKnown RBP5.32□□□□□ -1.56
RNU6-553P-201ENST00000364047 SIDT1Q9NXL6 827 aaKnown RBP5.32□□□□□ -1.56
RNU6-553P-201ENST00000364047 DMTF1Q9Y222 760 aa5.32□□□□□ -1.56
RNU6-553P-201ENST00000364047 PCDHA3Q9Y5H8 950 aa5.32□□□□□ -1.56
RNU6-553P-201ENST00000364047 PRAMEF33A0A0G2JMD5 474 aa5.31□□□□□ -1.56
RNU6-553P-201ENST00000364047 A0A1W2PS29 197 aa5.31□□□□□ -1.56
RNU6-553P-201ENST00000364047 PRAMEF10O60809 474 aa5.31□□□□□ -1.56
RNU6-553P-201ENST00000364047 PPFIA2O75334 1257 aa5.31□□□□□ -1.56
RNU6-553P-201ENST00000364047 ARIH2O95376 493 aa5.31□□□□□ -1.56
RNU6-553P-201ENST00000364047 FTLP02792 175 aaPredicted RBP5.31□□□□□ -1.56
RNU6-553P-201ENST00000364047 ANXA1P04083 346 aa5.31□□□□□ -1.56
RNU6-553P-201ENST00000364047 TYRP1P17643 537 aa5.31□□□□□ -1.56
RNU6-553P-201ENST00000364047 CXCR5P32302 372 aa5.31□□□□□ -1.56
RNU6-553P-201ENST00000364047 CYP2C19P33261 490 aa5.31□□□□□ -1.56
RNU6-553P-201ENST00000364047 FXR1P51114 621 aaKnown RBP eCLIP5.31□□□□□ -1.56
RNU6-553P-201ENST00000364047 IGBP1P78318 339 aa5.31□□□□□ -1.56
RNU6-553P-201ENST00000364047 PIGFQ07326 219 aa5.31□□□□□ -1.56
RNU6-553P-201ENST00000364047 NOGQ13253 232 aa5.31□□□□□ -1.56
RNU6-553P-201ENST00000364047 ERCC6LQ2NKX8 1250 aa5.31□□□□□ -1.56
RNU6-553P-201ENST00000364047 SP5Q6BEB4 398 aaPredicted RBP5.31□□□□□ -1.56
RNU6-553P-201ENST00000364047 CFAP52Q8N1V2 620 aa5.31□□□□□ -1.56
RNU6-553P-201ENST00000364047 NSUN7Q8NE18 718 aaKnown RBP5.31□□□□□ -1.56
RNU6-553P-201ENST00000364047 SSH3Q8TE77 659 aa5.31□□□□□ -1.56
RNU6-553P-201ENST00000364047 HOOK2Q96ED9 719 aa5.31□□□□□ -1.56
RNU6-553P-201ENST00000364047 CRAMP1Q96RY5 1269 aa5.31□□□□□ -1.56
RNU6-553P-201ENST00000364047 BRD9Q9H8M2 597 aa5.31□□□□□ -1.56
RNU6-553P-201ENST00000364047 KCTD5Q9NXV2 234 aa5.31□□□□□ -1.56
RNU6-553P-201ENST00000364047 VSX1Q9NZR4 365 aaPredicted RBP5.31□□□□□ -1.56
RNU6-553P-201ENST00000364047 IP6K2Q9UHH9 426 aa5.31□□□□□ -1.56
RNU6-553P-201ENST00000364047 CCDC195A0A1B0GUA6 201 aa5.3□□□□□ -1.56
RNU6-553P-201ENST00000364047 ZAR1LA6NP61 321 aa5.3□□□□□ -1.56
RNU6-553P-201ENST00000364047 ZNF785A8K8V0 405 aa5.3□□□□□ -1.56
RNU6-553P-201ENST00000364047 TOR1BO14657 336 aa5.3□□□□□ -1.56
RNU6-553P-201ENST00000364047 KIAA0355O15063 1070 aa5.3□□□□□ -1.56
RNU6-553P-201ENST00000364047 SLC16A6O15403 523 aa5.3□□□□□ -1.56
RNU6-553P-201ENST00000364047 GJB1P08034 283 aa5.3□□□□□ -1.56
RNU6-553P-201ENST00000364047 POU2F2P09086 479 aa5.3□□□□□ -1.56
RNU6-553P-201ENST00000364047 CT47B1P0C2W7 299 aaPredicted RBP5.3□□□□□ -1.56
RNU6-553P-201ENST00000364047 FTH1P19P0C7X4 201 aa5.3□□□□□ -1.56
RNU6-553P-201ENST00000364047 PF4V1P10720 104 aa5.3□□□□□ -1.56
RNU6-553P-201ENST00000364047 PIK3CGP48736 1102 aa5.3□□□□□ -1.56
RNU6-553P-201ENST00000364047 RPS7P62081 194 aaKnown RBP5.3□□□□□ -1.56
RNU6-553P-201ENST00000364047 PSMC1P62191 440 aaKnown RBP5.3□□□□□ -1.56
RNU6-553P-201ENST00000364047 FPGSQ05932 587 aa5.3□□□□□ -1.56
RNU6-553P-201ENST00000364047 SF3B3Q15393 1217 aaKnown RBP5.3□□□□□ -1.56
RNU6-553P-201ENST00000364047 PREPLQ4J6C6 727 aaPredicted RBP5.3□□□□□ -1.56
RNU6-553P-201ENST00000364047 TAPT1Q6NXT6 567 aa5.3□□□□□ -1.56
RNU6-553P-201ENST00000364047 HEATR3Q7Z4Q2 680 aa5.3□□□□□ -1.56
RNU6-553P-201ENST00000364047 PDSS2Q86YH6 399 aa5.3□□□□□ -1.56
RNU6-553P-201ENST00000364047 LNX2Q8N448 690 aa5.3□□□□□ -1.56
RNU6-553P-201ENST00000364047 PRR18Q8N4B5 295 aa5.3□□□□□ -1.56
RNU6-553P-201ENST00000364047 SLC9A6Q92581 669 aa5.3□□□□□ -1.56
RNU6-553P-201ENST00000364047 GTPBP4Q9BZE4 634 aaKnown RBP5.3□□□□□ -1.56
RNU6-553P-201ENST00000364047 SYNPO2LQ9H987 977 aa5.3□□□□□ -1.56
RNU6-553P-201ENST00000364047 DDX56Q9NY93 547 aaKnown RBP5.3□□□□□ -1.56
RNU6-553P-201ENST00000364047 CTTNBP2NLQ9P2B4 639 aa5.3□□□□□ -1.56
RNU6-553P-201ENST00000364047 CFAP97Q9P2B7 532 aa5.3□□□□□ -1.56
RNU6-553P-201ENST00000364047 ABCF2Q9UG63 623 aa5.3□□□□□ -1.56
RNU6-553P-201ENST00000364047 FEZ2Q9UHY8 353 aaPredicted RBP5.3□□□□□ -1.56
RNU6-553P-201ENST00000364047 NEU2Q9Y3R4 380 aa5.3□□□□□ -1.56
RNU6-553P-201ENST00000364047 SALL3Q9BXA9 1300 aa5.29□□□□□ -1.56
RNU6-553P-201ENST00000364047 E9PLN8 166 aa5.29□□□□□ -1.56
RNU6-553P-201ENST00000364047 ALDH1L1O75891 902 aa5.29□□□□□ -1.56
RNU6-553P-201ENST00000364047 SUN1O94901 812 aa5.29□□□□□ -1.56
RNU6-553P-201ENST00000364047 PDGFRBP09619 1106 aa5.29□□□□□ -1.56
RNU6-553P-201ENST00000364047 VCAM1P19320 739 aa5.29□□□□□ -1.56
RNU6-553P-201ENST00000364047 NCLP19338 710 aaKnown RBP5.29□□□□□ -1.56
RNU6-553P-201ENST00000364047 PRDX5P30044 214 aa5.29□□□□□ -1.56
RNU6-553P-201ENST00000364047 ANXA11P50995 505 aaKnown RBP5.29□□□□□ -1.56
RNU6-553P-201ENST00000364047 HK3P52790 923 aa5.29□□□□□ -1.56
RNU6-553P-201ENST00000364047 MRPS35P82673 323 aaKnown RBP5.29□□□□□ -1.56
RNU6-553P-201ENST00000364047 MC2RQ01718 297 aa5.29□□□□□ -1.56
RNU6-553P-201ENST00000364047 PGS1Q32NB8 556 aa5.29□□□□□ -1.56
RNU6-553P-201ENST00000364047 CD300EQ496F6 205 aaPredicted RBP5.29□□□□□ -1.56
RNU6-553P-201ENST00000364047 STRIP1Q5VSL9 837 aa5.29□□□□□ -1.56
RNU6-553P-201ENST00000364047 STAG1Q8WVM7 1258 aa5.29□□□□□ -1.56
RNU6-553P-201ENST00000364047 SCAMP4Q969E2 229 aa5.29□□□□□ -1.56
RNU6-553P-201ENST00000364047 NUP88Q99567 741 aaPredicted RBP5.29□□□□□ -1.56
RNU6-553P-201ENST00000364047 SMOQ99835 787 aa5.29□□□□□ -1.56
RNU6-553P-201ENST00000364047 VKORC1Q9BQB6 163 aa5.29□□□□□ -1.56
RNU6-553P-201ENST00000364047 C1orf43Q9BWL3 253 aa5.29□□□□□ -1.56
RNU6-553P-201ENST00000364047 WDCPQ9H6R7 721 aa5.29□□□□□ -1.56
RNU6-553P-201ENST00000364047 TCF7L1Q9HCS4 588 aa5.29□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms