RNA–Protein interactions for RNA: ENST00000364007.1

RNU6-560P-201, Transcript of RNA, U6 small nuclear 560, pseudogene, humanhuman

BASIC

Gene RNU6-560P, Length 108 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-560P-201ENST00000364007 ZDHHC8Q9ULC8 765 aa5.38□□□□□ -1.55
RNU6-560P-201ENST00000364007 TSC22D4Q9Y3Q8 395 aa5.38□□□□□ -1.55
RNU6-560P-201ENST00000364007 CHST2Q9Y4C5 530 aa5.38□□□□□ -1.55
RNU6-560P-201ENST00000364007 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP5.38□□□□□ -1.55
RNU6-560P-201ENST00000364007 A0A1W2PPL8 197 aa5.37□□□□□ -1.55
RNU6-560P-201ENST00000364007 PHGDHO43175 533 aaKnown RBP5.37□□□□□ -1.55
RNU6-560P-201ENST00000364007 RPS6KA4O75676 772 aa5.37□□□□□ -1.55
RNU6-560P-201ENST00000364007 ELANEP08246 267 aa5.37□□□□□ -1.55
RNU6-560P-201ENST00000364007 CACNB3P54284 484 aa5.37□□□□□ -1.55
RNU6-560P-201ENST00000364007 FAM193AP78312 1265 aa5.37□□□□□ -1.55
RNU6-560P-201ENST00000364007 SLC25A3Q00325 362 aa5.37□□□□□ -1.55
RNU6-560P-201ENST00000364007 HLTFQ14527 1009 aaKnown RBP eCLIP5.37□□□□□ -1.55
RNU6-560P-201ENST00000364007 NRN1LQ496H8 165 aa5.37□□□□□ -1.55
RNU6-560P-201ENST00000364007 CRB2Q5IJ48 1285 aa5.37□□□□□ -1.55
RNU6-560P-201ENST00000364007 GDF7Q7Z4P5 450 aa5.37□□□□□ -1.55
RNU6-560P-201ENST00000364007 PRRT2Q7Z6L0 340 aaPredicted RBP5.37□□□□□ -1.55
RNU6-560P-201ENST00000364007 PDSS2Q86YH6 399 aa5.37□□□□□ -1.55
RNU6-560P-201ENST00000364007 PDPRQ8NCN5 879 aa5.37□□□□□ -1.55
RNU6-560P-201ENST00000364007 NUP133Q8WUM0 1156 aa5.37□□□□□ -1.55
RNU6-560P-201ENST00000364007 LRTOMTQ8WZ04 291 aa5.37□□□□□ -1.55
RNU6-560P-201ENST00000364007 ANKS1AQ92625 1134 aa5.37□□□□□ -1.55
RNU6-560P-201ENST00000364007 TTC17Q96AE7 1141 aa5.37□□□□□ -1.55
RNU6-560P-201ENST00000364007 DCLRE1CQ96SD1 692 aaKnown RBP5.37□□□□□ -1.55
RNU6-560P-201ENST00000364007 CDK5RAP1Q96SZ6 601 aaKnown RBP5.37□□□□□ -1.55
RNU6-560P-201ENST00000364007 SLC52A1Q9NWF4 448 aa5.37□□□□□ -1.55
RNU6-560P-201ENST00000364007 CAMSAP3Q9P1Y5 1249 aaPredicted RBP5.37□□□□□ -1.55
RNU6-560P-201ENST00000364007 HSFX1Q9UBD0 423 aa5.37□□□□□ -1.55
RNU6-560P-201ENST00000364007 ATP11BQ9Y2G3 1177 aa5.37□□□□□ -1.55
RNU6-560P-201ENST00000364007 MAP3K2Q9Y2U5 619 aa5.37□□□□□ -1.55
RNU6-560P-201ENST00000364007 GOLIM4O00461 696 aa5.36□□□□□ -1.55
RNU6-560P-201ENST00000364007 MAP4K4O95819 1239 aaPredicted RBP5.36□□□□□ -1.55
RNU6-560P-201ENST00000364007 MYL1P05976 194 aa5.36□□□□□ -1.55
RNU6-560P-201ENST00000364007 C1SP09871 688 aa5.36□□□□□ -1.55
RNU6-560P-201ENST00000364007 RARBP10826 455 aa5.36□□□□□ -1.55
RNU6-560P-201ENST00000364007 FGFR4P22455 802 aa5.36□□□□□ -1.55
RNU6-560P-201ENST00000364007 NR4A1P22736 598 aa5.36□□□□□ -1.55
RNU6-560P-201ENST00000364007 PEX2P28328 305 aa5.36□□□□□ -1.55
RNU6-560P-201ENST00000364007 SLC7A1P30825 629 aa5.36□□□□□ -1.55
RNU6-560P-201ENST00000364007 KCNJ5P48544 419 aa5.36□□□□□ -1.55
RNU6-560P-201ENST00000364007 ZNF135P52742 658 aaPredicted RBP5.36□□□□□ -1.55
RNU6-560P-201ENST00000364007 DGCR2P98153 550 aa5.36□□□□□ -1.55
RNU6-560P-201ENST00000364007 PURAQ00577 322 aaKnown RBP5.36□□□□□ -1.55
RNU6-560P-201ENST00000364007 SAFBQ15424 915 aaKnown RBP eCLIP5.36□□□□□ -1.55
RNU6-560P-201ENST00000364007 EMC10Q5UCC4 262 aa5.36□□□□□ -1.55
RNU6-560P-201ENST00000364007 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP5.36□□□□□ -1.55
RNU6-560P-201ENST00000364007 LRRC55Q6ZSA7 311 aa5.36□□□□□ -1.55
RNU6-560P-201ENST00000364007 USP37Q86T82 979 aa5.36□□□□□ -1.55
RNU6-560P-201ENST00000364007 AOPEPQ8N6M6 819 aa5.36□□□□□ -1.55
RNU6-560P-201ENST00000364007 PJA1Q8NG27 643 aa5.36□□□□□ -1.55
RNU6-560P-201ENST00000364007 LRIG1Q96JA1 1093 aa5.36□□□□□ -1.55
RNU6-560P-201ENST00000364007 KRTAP9-9Q9BYP9 154 aa5.36□□□□□ -1.55
RNU6-560P-201ENST00000364007 KRTAP9-4Q9BYQ2 154 aa5.36□□□□□ -1.55
RNU6-560P-201ENST00000364007 REXO4Q9GZR2 422 aaKnown RBP5.36□□□□□ -1.55
RNU6-560P-201ENST00000364007 GPR35Q9HC97 309 aa5.36□□□□□ -1.55
RNU6-560P-201ENST00000364007 CHST12Q9NRB3 414 aa5.36□□□□□ -1.55
RNU6-560P-201ENST00000364007 CNNM1Q9NRU3 951 aa5.36□□□□□ -1.55
RNU6-560P-201ENST00000364007 PIH1D1Q9NWS0 290 aaKnown RBP5.36□□□□□ -1.55
RNU6-560P-201ENST00000364007 CPNE7Q9UBL6 633 aa5.36□□□□□ -1.55
RNU6-560P-201ENST00000364007 TPCN1Q9ULQ1 816 aa5.36□□□□□ -1.55
RNU6-560P-201ENST00000364007 A0A1B0GTW7 788 aa5.35□□□□□ -1.55
RNU6-560P-201ENST00000364007 MYO1FO00160 1098 aa5.35□□□□□ -1.55
RNU6-560P-201ENST00000364007 TBX3O15119 743 aa5.35□□□□□ -1.55
RNU6-560P-201ENST00000364007 TRIM24O15164 1050 aa5.35□□□□□ -1.55
RNU6-560P-201ENST00000364007 PMM2O15305 246 aa5.35□□□□□ -1.55
RNU6-560P-201ENST00000364007 PQBP1O60828 265 aaKnown RBP5.35□□□□□ -1.55
RNU6-560P-201ENST00000364007 DNAJB5O75953 348 aa5.35□□□□□ -1.55
RNU6-560P-201ENST00000364007 NCR1O76036 304 aa5.35□□□□□ -1.55
RNU6-560P-201ENST00000364007 RECQL4O94761 1208 aa5.35□□□□□ -1.55
RNU6-560P-201ENST00000364007 KIF20AO95235 890 aa5.35□□□□□ -1.55
RNU6-560P-201ENST00000364007 ANXA1P04083 346 aa5.35□□□□□ -1.55
RNU6-560P-201ENST00000364007 MYF5P13349 255 aa5.35□□□□□ -1.55
RNU6-560P-201ENST00000364007 ZFP36P26651 326 aaKnown RBP5.35□□□□□ -1.55
RNU6-560P-201ENST00000364007 SUMO3P55854 103 aaPredicted RBP5.35□□□□□ -1.55
RNU6-560P-201ENST00000364007 HSD11B2P80365 405 aa5.35□□□□□ -1.55
RNU6-560P-201ENST00000364007 OCA2Q04671 838 aa5.35□□□□□ -1.55
RNU6-560P-201ENST00000364007 HABP2Q14520 560 aaPredicted RBP5.35□□□□□ -1.55
RNU6-560P-201ENST00000364007 IL31Q6EBC2 164 aa5.35□□□□□ -1.55
RNU6-560P-201ENST00000364007 CCSAPQ6IQ19 270 aaPredicted RBP5.35□□□□□ -1.55
RNU6-560P-201ENST00000364007 SPRED1Q7Z699 444 aa5.35□□□□□ -1.55
RNU6-560P-201ENST00000364007 CFAP52Q8N1V2 620 aa5.35□□□□□ -1.55
RNU6-560P-201ENST00000364007 SH3RF3Q8TEJ3 882 aaPredicted RBP5.35□□□□□ -1.55
RNU6-560P-201ENST00000364007 SCAMP4Q969E2 229 aa5.35□□□□□ -1.55
RNU6-560P-201ENST00000364007 PLEKHG4BQ96PX9 1271 aa5.35□□□□□ -1.55
RNU6-560P-201ENST00000364007 PNKPQ96T60 521 aa5.35□□□□□ -1.55
RNU6-560P-201ENST00000364007 TRIM54Q9BYV2 358 aa5.35□□□□□ -1.55
RNU6-560P-201ENST00000364007 ZNF703Q9H7S9 590 aaPredicted RBP5.35□□□□□ -1.55
RNU6-560P-201ENST00000364007 RLIMQ9NVW2 624 aa5.35□□□□□ -1.55
RNU6-560P-201ENST00000364007 CDYLQ9Y232 598 aa5.35□□□□□ -1.55
RNU6-560P-201ENST00000364007 CCDC194A0A1B0GVG4 234 aa5.34□□□□□ -1.55
RNU6-560P-201ENST00000364007 DIRC3C9JPN6 131 aa5.34□□□□□ -1.55
RNU6-560P-201ENST00000364007 M0QYG6 137 aa5.34□□□□□ -1.55
RNU6-560P-201ENST00000364007 VPS4BO75351 444 aa5.34□□□□□ -1.55
RNU6-560P-201ENST00000364007 MYL3P08590 195 aa5.34□□□□□ -1.55
RNU6-560P-201ENST00000364007 SLC5A1P13866 664 aa5.34□□□□□ -1.55
RNU6-560P-201ENST00000364007 ARFIP2P53365 341 aa5.34□□□□□ -1.55
RNU6-560P-201ENST00000364007 BOP1Q14137 746 aaKnown RBP5.34□□□□□ -1.55
RNU6-560P-201ENST00000364007 POLD3Q15054 466 aaPredicted RBP5.34□□□□□ -1.55
RNU6-560P-201ENST00000364007 B3GNTL1Q67FW5 361 aaPredicted RBP5.34□□□□□ -1.55
RNU6-560P-201ENST00000364007 SLC30A10Q6XR72 485 aa5.34□□□□□ -1.55
RNU6-560P-201ENST00000364007 MAPKAPK5Q8IW41 473 aa5.34□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 11.5 ms