RNA–Protein interactions for RNA: ENST00000361987.5

CNTF-201, Transcript of ciliary neurotrophic factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CNTF, Length 1,894 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNTF-201ENST00000361987 C2CD2LO14523 706 aa13.55□□□□□ -0.24
CNTF-201ENST00000361987 VNN1O95497 513 aa13.55□□□□□ -0.24
CNTF-201ENST00000361987 EEF1GP26641 437 aaKnown RBP13.55□□□□□ -0.24
CNTF-201ENST00000361987 PIK3CAP42336 1068 aa13.55□□□□□ -0.24
CNTF-201ENST00000361987 FMO5P49326 533 aa13.55□□□□□ -0.24
CNTF-201ENST00000361987 ZNF445P59923 1031 aa13.55□□□□□ -0.24
CNTF-201ENST00000361987 ERVFC1P60507 584 aa13.55□□□□□ -0.24
CNTF-201ENST00000361987 UBE3AQ05086 875 aa13.55□□□□□ -0.24
CNTF-201ENST00000361987 ELAVL2Q12926 359 aaKnown RBP13.55□□□□□ -0.24
CNTF-201ENST00000361987 BMS1Q14692 1282 aaKnown RBP13.55□□□□□ -0.24
CNTF-201ENST00000361987 IQCB1Q15051 598 aa13.55□□□□□ -0.24
CNTF-201ENST00000361987 USP41Q3LFD5 358 aa13.55□□□□□ -0.24
CNTF-201ENST00000361987 SV2CQ496J9 727 aa13.55□□□□□ -0.24
CNTF-201ENST00000361987 LRRC52Q8N7C0 313 aa13.55□□□□□ -0.24
CNTF-201ENST00000361987 TAS1R2Q8TE23 839 aa13.55□□□□□ -0.24
CNTF-201ENST00000361987 ELMO3Q96BJ8 720 aa13.55□□□□□ -0.24
CNTF-201ENST00000361987 TCF25Q9BQ70 676 aa13.55□□□□□ -0.24
CNTF-201ENST00000361987 ENTPD7Q9NQZ7 604 aa13.55□□□□□ -0.24
CNTF-201ENST00000361987 TLR9Q9NR96 1032 aa13.55□□□□□ -0.24
CNTF-201ENST00000361987 STK39Q9UEW8 545 aa13.55□□□□□ -0.24
CNTF-201ENST00000361987 SCN1AP35498 2009 aa13.55□□□□□ -0.24
CNTF-201ENST00000361987 LPXNO60711 386 aa13.55□□□□□ -0.24
CNTF-201ENST00000361987 HLA-DRAP01903 254 aa13.55□□□□□ -0.24
CNTF-201ENST00000361987 AFPP02771 609 aaKnown RBP13.55□□□□□ -0.24
CNTF-201ENST00000361987 SOD2P04179 222 aa13.55□□□□□ -0.24
CNTF-201ENST00000361987 CAMK1Q14012 370 aa13.55□□□□□ -0.24
CNTF-201ENST00000361987 WDR72Q3MJ13 1102 aa13.55□□□□□ -0.24
CNTF-201ENST00000361987 CDKAL1Q5VV42 579 aa13.55□□□□□ -0.24
CNTF-201ENST00000361987 FBXL13Q8NEE6 735 aa13.55□□□□□ -0.24
CNTF-201ENST00000361987 ANKRD20A12PQ8NF67 263 aa13.55□□□□□ -0.24
CNTF-201ENST00000361987 FAM200AQ8TCP9 573 aa13.55□□□□□ -0.24
CNTF-201ENST00000361987 SUSD3Q96L08 255 aa13.55□□□□□ -0.24
CNTF-201ENST00000361987 SENP8Q96LD8 212 aa13.55□□□□□ -0.24
CNTF-201ENST00000361987 PI4K2AQ9BTU6 479 aa13.55□□□□□ -0.24
CNTF-201ENST00000361987 TTPALQ9BTX7 342 aa13.55□□□□□ -0.24
CNTF-201ENST00000361987 TIMM13Q9Y5L4 95 aaPredicted RBP13.55□□□□□ -0.24
CNTF-201ENST00000361987 SNX9Q9Y5X1 595 aa13.55□□□□□ -0.24
CNTF-201ENST00000361987 GOLGA6L19H0YKK7 550 aa13.54□□□□□ -0.24
CNTF-201ENST00000361987 CYB561D2O14569 222 aa13.54□□□□□ -0.24
CNTF-201ENST00000361987 CXCL14O95715 111 aa13.54□□□□□ -0.24
CNTF-201ENST00000361987 EFEMP2O95967 443 aa13.54□□□□□ -0.24
CNTF-201ENST00000361987 IGFBP4P22692 258 aa13.54□□□□□ -0.24
CNTF-201ENST00000361987 TKTP29401 623 aaKnown RBP13.54□□□□□ -0.24
CNTF-201ENST00000361987 ATICP31939 592 aa13.54□□□□□ -0.24
CNTF-201ENST00000361987 AARSP49588 968 aaKnown RBP eCLIP13.54□□□□□ -0.24
CNTF-201ENST00000361987 MYL7Q01449 175 aa13.54□□□□□ -0.24
CNTF-201ENST00000361987 CETN1Q12798 172 aa13.54□□□□□ -0.24
CNTF-201ENST00000361987 MAN2A1Q16706 1144 aa13.54□□□□□ -0.24
CNTF-201ENST00000361987 PTPROQ16827 1216 aa13.54□□□□□ -0.24
CNTF-201ENST00000361987 SGSM1Q2NKQ1 1148 aa13.54□□□□□ -0.24
CNTF-201ENST00000361987 ZNF699Q32M78 642 aa13.54□□□□□ -0.24
CNTF-201ENST00000361987 CCDC150Q8NCX0 1101 aa13.54□□□□□ -0.24
CNTF-201ENST00000361987 AUTS2Q8WXX7 1259 aa13.54□□□□□ -0.24
CNTF-201ENST00000361987 MMS19Q96T76 1030 aa13.54□□□□□ -0.24
CNTF-201ENST00000361987 IMPG2Q9BZV3 1241 aa13.54□□□□□ -0.24
CNTF-201ENST00000361987 HSD3B7Q9H2F3 369 aa13.54□□□□□ -0.24
CNTF-201ENST00000361987 RAB20Q9NX57 234 aa13.54□□□□□ -0.24
CNTF-201ENST00000361987 NXF1Q9UBU9 619 aaKnown RBP13.54□□□□□ -0.24
CNTF-201ENST00000361987 N4BP1O75113 896 aaKnown RBP13.53□□□□□ -0.24
CNTF-201ENST00000361987 LRRN2O75325 713 aa13.53□□□□□ -0.24
CNTF-201ENST00000361987 URODP06132 367 aa13.53□□□□□ -0.24
CNTF-201ENST00000361987 TPM2P07951 284 aa13.53□□□□□ -0.24
CNTF-201ENST00000361987 ATP1A3P13637 1013 aa13.53□□□□□ -0.24
CNTF-201ENST00000361987 ZNF18P17022 549 aa13.53□□□□□ -0.24
CNTF-201ENST00000361987 PAX3P23760 479 aa13.53□□□□□ -0.24
CNTF-201ENST00000361987 IRS1P35568 1242 aa13.53□□□□□ -0.24
CNTF-201ENST00000361987 TPM4P67936 248 aa13.53□□□□□ -0.24
CNTF-201ENST00000361987 KRT31Q15323 416 aa13.53□□□□□ -0.24
CNTF-201ENST00000361987 VWA3BQ502W6 1294 aa13.53□□□□□ -0.24
CNTF-201ENST00000361987 RTP2Q5QGT7 225 aa13.53□□□□□ -0.24
CNTF-201ENST00000361987 PLPP4Q5VZY2 271 aa13.53□□□□□ -0.24
CNTF-201ENST00000361987 RNF168Q8IYW5 571 aaPredicted RBP13.53□□□□□ -0.24
CNTF-201ENST00000361987 RNF214Q8ND24 703 aa13.53□□□□□ -0.24
CNTF-201ENST00000361987 RIN2Q8WYP3 895 aaPredicted RBP13.53□□□□□ -0.24
CNTF-201ENST00000361987 SEMA4DQ92854 862 aa13.53□□□□□ -0.24
CNTF-201ENST00000361987 GAS2L1Q99501 681 aaPredicted RBP13.53□□□□□ -0.24
CNTF-201ENST00000361987 ANP32EQ9BTT0 268 aa13.53□□□□□ -0.24
CNTF-201ENST00000361987 XYLT2Q9H1B5 865 aa13.53□□□□□ -0.24
CNTF-201ENST00000361987 VPS16Q9H269 839 aa13.53□□□□□ -0.24
CNTF-201ENST00000361987 NDST4Q9H3R1 872 aa13.53□□□□□ -0.24
CNTF-201ENST00000361987 MRPL17Q9NRX2 175 aaKnown RBP13.53□□□□□ -0.24
CNTF-201ENST00000361987 CHST7Q9NS84 486 aa13.53□□□□□ -0.24
CNTF-201ENST00000361987 TAB2Q9NYJ8 693 aa13.53□□□□□ -0.24
CNTF-201ENST00000361987 PCDHGC5Q9Y5F6 944 aa13.53□□□□□ -0.24
CNTF-201ENST00000361987 M0QZQ0 153 aa13.53□□□□□ -0.24
CNTF-201ENST00000361987 SYN3O14994 580 aa13.53□□□□□ -0.24
CNTF-201ENST00000361987 HUS1O60921 280 aa13.53□□□□□ -0.24
CNTF-201ENST00000361987 CTSAP10619 480 aa13.53□□□□□ -0.24
CNTF-201ENST00000361987 FGFR3P22607 806 aa13.53□□□□□ -0.24
CNTF-201ENST00000361987 GLUD2P49448 558 aa13.53□□□□□ -0.24
CNTF-201ENST00000361987 ZNF667Q5HYK9 610 aa13.53□□□□□ -0.24
CNTF-201ENST00000361987 WDR44Q5JSH3 913 aa13.53□□□□□ -0.24
CNTF-201ENST00000361987 SPOPLQ6IQ16 392 aa13.53□□□□□ -0.24
CNTF-201ENST00000361987 PDZRN4Q6ZMN7 1036 aaPredicted RBP13.53□□□□□ -0.24
CNTF-201ENST00000361987 APPL2Q8NEU8 664 aa13.53□□□□□ -0.24
CNTF-201ENST00000361987 MRPL38Q96DV4 380 aaKnown RBP13.53□□□□□ -0.24
CNTF-201ENST00000361987 CDX2Q99626 313 aaPredicted RBP13.53□□□□□ -0.24
CNTF-201ENST00000361987 HERC2P3Q9BVR0 1158 aa13.53□□□□□ -0.24
CNTF-201ENST00000361987 LMAN2LQ9H0V9 348 aa13.53□□□□□ -0.24
CNTF-201ENST00000361987 ZBP1Q9H171 429 aa13.53□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms