RNA–Protein interactions for RNA: ENST00000360565.7

SCAF1-201, Transcript of SR-related CTD associated factor 1, humanhuman

APPRIS P2 TSL 2 BASIC

Gene SCAF1, Length 4,306 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF1-201ENST00000360565 CASQ2O14958 399 aaPredicted RBP17.21■□□□□ 0.35
SCAF1-201ENST00000360565 SESN2P58004 480 aaPredicted RBP17.21■□□□□ 0.35
SCAF1-201ENST00000360565 AP1B1Q10567 949 aa17.21■□□□□ 0.35
SCAF1-201ENST00000360565 ATF7IP2Q5U623 682 aa17.21■□□□□ 0.35
SCAF1-201ENST00000360565 CDKL3Q8IVW4 592 aaPredicted RBP17.21■□□□□ 0.35
SCAF1-201ENST00000360565 ARHGEF19Q8IW93 802 aa17.21■□□□□ 0.35
SCAF1-201ENST00000360565 KIF2BQ8N4N8 673 aa17.21■□□□□ 0.35
SCAF1-201ENST00000360565 ERP27Q96DN0 273 aa17.21■□□□□ 0.35
SCAF1-201ENST00000360565 AGO4Q9HCK5 861 aaKnown RBP17.21■□□□□ 0.35
SCAF1-201ENST00000360565 PSMC3IPQ9P2W1 217 aaPredicted RBP17.21■□□□□ 0.35
SCAF1-201ENST00000360565 MID2Q9UJV3 735 aa17.21■□□□□ 0.35
SCAF1-201ENST00000360565 PCDHAC2Q9Y5I4 1007 aa17.21■□□□□ 0.35
SCAF1-201ENST00000360565 APOL1O14791 398 aa17.2■□□□□ 0.34
SCAF1-201ENST00000360565 SLC4A1P02730 911 aa17.2■□□□□ 0.34
SCAF1-201ENST00000360565 NME3Q13232 169 aa17.2■□□□□ 0.34
SCAF1-201ENST00000360565 KCNV1Q6PIU1 500 aa17.2■□□□□ 0.34
SCAF1-201ENST00000360565 STOML1Q9UBI4 398 aa17.2■□□□□ 0.34
SCAF1-201ENST00000360565 FAM198AQ9UFP1 575 aa17.2■□□□□ 0.34
SCAF1-201ENST00000360565 HACL1Q9UJ83 578 aa17.2■□□□□ 0.34
SCAF1-201ENST00000360565 SLC5A5Q92911 643 aa17.2■□□□□ 0.34
SCAF1-201ENST00000360565 ARHGEF26Q96DR7 871 aa17.2■□□□□ 0.34
SCAF1-201ENST00000360565 SMARCAD1Q9H4L7 1026 aa17.2■□□□□ 0.34
SCAF1-201ENST00000360565 BFARQ9NZS9 450 aa17.2■□□□□ 0.34
SCAF1-201ENST00000360565 EIF4E1BA6NMX2 242 aaKnown RBP17.2■□□□□ 0.34
SCAF1-201ENST00000360565 LCP1P13796 627 aa17.2■□□□□ 0.34
SCAF1-201ENST00000360565 GARTP22102 1010 aa17.2■□□□□ 0.34
SCAF1-201ENST00000360565 RBP5P82980 135 aa17.2■□□□□ 0.34
SCAF1-201ENST00000360565 TMC2Q8TDI7 906 aa17.2■□□□□ 0.34
SCAF1-201ENST00000360565 PPWD1Q96BP3 646 aaKnown RBP17.2■□□□□ 0.34
SCAF1-201ENST00000360565 GCOM2Q9BZD3 368 aaPredicted RBP17.2■□□□□ 0.34
SCAF1-201ENST00000360565 CDC42EP4Q9H3Q1 356 aaKnown RBP17.2■□□□□ 0.34
SCAF1-201ENST00000360565 SMYD3Q9H7B4 428 aa17.2■□□□□ 0.34
SCAF1-201ENST00000360565 NPHS2Q9NP85 383 aa17.2■□□□□ 0.34
SCAF1-201ENST00000360565 XPO7Q9UIA9 1087 aaKnown RBP17.2■□□□□ 0.34
SCAF1-201ENST00000360565 SCOCQ9UIL1 159 aa17.2■□□□□ 0.34
SCAF1-201ENST00000360565 KIF1AQ12756 1690 aa17.2■□□□□ 0.34
SCAF1-201ENST00000360565 FRMPD4Q14CM0 1322 aa17.2■□□□□ 0.34
SCAF1-201ENST00000360565 VCAM1P19320 739 aa17.2■□□□□ 0.34
SCAF1-201ENST00000360565 TYK2P29597 1187 aa17.2■□□□□ 0.34
SCAF1-201ENST00000360565 HNRNPH3P31942 346 aaKnown RBP17.2■□□□□ 0.34
SCAF1-201ENST00000360565 EPHB1P54762 984 aa17.2■□□□□ 0.34
SCAF1-201ENST00000360565 DNAJC3Q13217 504 aa17.2■□□□□ 0.34
SCAF1-201ENST00000360565 SLC15A2Q16348 729 aa17.2■□□□□ 0.34
SCAF1-201ENST00000360565 ECM1Q16610 540 aa17.2■□□□□ 0.34
SCAF1-201ENST00000360565 IER5Q5VY09 327 aa17.2■□□□□ 0.34
SCAF1-201ENST00000360565 PCNX4Q63HM2 1172 aa17.2■□□□□ 0.34
SCAF1-201ENST00000360565 PID1Q7Z2X4 250 aa17.2■□□□□ 0.34
SCAF1-201ENST00000360565 MIPOL1Q8TD10 442 aa17.2■□□□□ 0.34
SCAF1-201ENST00000360565 MKL1Q969V6 931 aa17.2■□□□□ 0.34
SCAF1-201ENST00000360565 SERPINB12Q96P63 405 aa17.2■□□□□ 0.34
SCAF1-201ENST00000360565 FAM167BQ9BTA0 163 aa17.2■□□□□ 0.34
SCAF1-201ENST00000360565 ANGPTL2Q9UKU9 493 aa17.2■□□□□ 0.34
SCAF1-201ENST00000360565 USH1CQ9Y6N9 552 aa17.2■□□□□ 0.34
SCAF1-201ENST00000360565 VIL1P09327 827 aaKnown RBP17.19■□□□□ 0.34
SCAF1-201ENST00000360565 PPM1FP49593 454 aaPredicted RBP17.19■□□□□ 0.34
SCAF1-201ENST00000360565 ERFP50548 548 aa17.19■□□□□ 0.34
SCAF1-201ENST00000360565 CYP24A1Q07973 514 aa17.19■□□□□ 0.34
SCAF1-201ENST00000360565 SPOUT1Q5T280 376 aaKnown RBP17.19■□□□□ 0.34
SCAF1-201ENST00000360565 LBHD1Q9BQE6 289 aaPredicted RBP17.19■□□□□ 0.34
SCAF1-201ENST00000360565 FAM49BQ9NUQ9 324 aa17.19■□□□□ 0.34
SCAF1-201ENST00000360565 ZC3H7BQ9UGR2 993 aaKnown RBP17.19■□□□□ 0.34
SCAF1-201ENST00000360565 INPP5FQ9Y2H2 1132 aa17.19■□□□□ 0.34
SCAF1-201ENST00000360565 USP20Q9Y2K6 914 aa17.19■□□□□ 0.34
SCAF1-201ENST00000360565 FMN2Q9NZ56 1722 aa17.19■□□□□ 0.34
SCAF1-201ENST00000360565 ARPP19P56211 112 aa17.19■□□□□ 0.34
SCAF1-201ENST00000360565 TMEM132DQ14C87 1099 aa17.19■□□□□ 0.34
SCAF1-201ENST00000360565 NPY5RQ15761 445 aa17.19■□□□□ 0.34
SCAF1-201ENST00000360565 C1orf186Q6ZWK4 172 aa17.19■□□□□ 0.34
SCAF1-201ENST00000360565 RPAINQ86UA6 219 aa17.19■□□□□ 0.34
SCAF1-201ENST00000360565 ABI1Q8IZP0 508 aa17.19■□□□□ 0.34
SCAF1-201ENST00000360565 FAM161BQ96MY7 647 aa17.19■□□□□ 0.34
SCAF1-201ENST00000360565 MED15Q96RN5 788 aa17.19■□□□□ 0.34
SCAF1-201ENST00000360565 ASB14A6NK59 587 aa17.19■□□□□ 0.34
SCAF1-201ENST00000360565 CXCL9Q07325 125 aa17.19■□□□□ 0.34
SCAF1-201ENST00000360565 GRAMD1BQ3KR37 738 aa17.19■□□□□ 0.34
SCAF1-201ENST00000360565 TAF1BQ53T94 588 aaPredicted RBP17.19■□□□□ 0.34
SCAF1-201ENST00000360565 UBA3Q8TBC4 463 aa17.19■□□□□ 0.34
SCAF1-201ENST00000360565 KAT5Q92993 513 aa17.19■□□□□ 0.34
SCAF1-201ENST00000360565 MTMR12Q9C0I1 747 aa17.19■□□□□ 0.34
SCAF1-201ENST00000360565 SLC40A1Q9NP59 571 aa17.19■□□□□ 0.34
SCAF1-201ENST00000360565 DIAPH2O60879 1101 aa17.18■□□□□ 0.34
SCAF1-201ENST00000360565 ZWINTO95229 277 aa17.18■□□□□ 0.34
SCAF1-201ENST00000360565 MYL3P08590 195 aa17.18■□□□□ 0.34
SCAF1-201ENST00000360565 HNRNPH1P31943 449 aaKnown RBP17.18■□□□□ 0.34
SCAF1-201ENST00000360565 STX1BP61266 288 aa17.18■□□□□ 0.34
SCAF1-201ENST00000360565 ART3Q13508 389 aa17.18■□□□□ 0.34
SCAF1-201ENST00000360565 PYGMP11217 842 aa17.18■□□□□ 0.34
SCAF1-201ENST00000360565 TCF7P36402 384 aaPredicted RBP17.18■□□□□ 0.34
SCAF1-201ENST00000360565 PRKCIP41743 596 aa17.18■□□□□ 0.34
SCAF1-201ENST00000360565 RAD23BP54727 409 aa17.18■□□□□ 0.34
SCAF1-201ENST00000360565 BACE1P56817 501 aa17.18■□□□□ 0.34
SCAF1-201ENST00000360565 EFCAB12Q6NXP0 572 aa17.18■□□□□ 0.34
SCAF1-201ENST00000360565 RFX8Q6ZV50 586 aa17.18■□□□□ 0.34
SCAF1-201ENST00000360565 TMC3Q7Z5M5 1100 aa17.18■□□□□ 0.34
SCAF1-201ENST00000360565 RYBPQ8N488 228 aaPredicted RBP17.18■□□□□ 0.34
SCAF1-201ENST00000360565 MX2P20592 715 aa17.18■□□□□ 0.34
SCAF1-201ENST00000360565 KCNT1Q5JUK3 1230 aa17.18■□□□□ 0.34
SCAF1-201ENST00000360565 ATXN7L3BQ96GX2 97 aa17.18■□□□□ 0.34
SCAF1-201ENST00000360565 GANQ9H2C0 597 aa17.18■□□□□ 0.34
SCAF1-201ENST00000360565 GDF3Q9NR23 364 aa17.18■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms