RNA–Protein interactions for RNA: ENST00000360515.7

CDC42SE2-201, Transcript of CDC42 small effector 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDC42SE2, Length 3,591 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE2-201ENST00000360515 TCHHQ07283 1943 aa6.61□□□□□ -1.35
CDC42SE2-201ENST00000360515 PKD1L2Q7Z442 2459 aa6.61□□□□□ -1.35
CDC42SE2-201ENST00000360515 ZNF638Q14966 1978 aaKnown RBP6.61□□□□□ -1.35
CDC42SE2-201ENST00000360515 ADAMTS9Q9P2N4 1935 aa6.61□□□□□ -1.35
CDC42SE2-201ENST00000360515 CCDC69A6NI79 296 aa6.61□□□□□ -1.35
CDC42SE2-201ENST00000360515 ACKR2O00590 384 aa6.61□□□□□ -1.35
CDC42SE2-201ENST00000360515 GAS7O60861 476 aa6.61□□□□□ -1.35
CDC42SE2-201ENST00000360515 NOL4O94818 638 aa6.61□□□□□ -1.35
CDC42SE2-201ENST00000360515 GSPT1P15170 499 aaKnown RBP6.61□□□□□ -1.35
CDC42SE2-201ENST00000360515 GLRA2P23416 452 aa6.61□□□□□ -1.35
CDC42SE2-201ENST00000360515 RDXP35241 583 aaKnown RBP6.61□□□□□ -1.35
CDC42SE2-201ENST00000360515 FGD1P98174 961 aa6.61□□□□□ -1.35
CDC42SE2-201ENST00000360515 FAM171A1Q5VUB5 890 aa6.61□□□□□ -1.35
CDC42SE2-201ENST00000360515 MIER3Q7Z3K6 550 aa6.61□□□□□ -1.35
CDC42SE2-201ENST00000360515 HAUS6Q7Z4H7 955 aa6.61□□□□□ -1.35
CDC42SE2-201ENST00000360515 TCEAL4Q96EI5 215 aa6.61□□□□□ -1.35
CDC42SE2-201ENST00000360515 MMP17Q9ULZ9 603 aa6.61□□□□□ -1.35
CDC42SE2-201ENST00000360515 TNFSF13BQ9Y275 285 aa6.61□□□□□ -1.35
CDC42SE2-201ENST00000360515 SLC12A7Q9Y666 1083 aa6.61□□□□□ -1.35
CDC42SE2-201ENST00000360515 ZZEF1O43149 2961 aa6.61□□□□□ -1.35
CDC42SE2-201ENST00000360515 CCDC196A0A1B0GTZ2 297 aa6.61□□□□□ -1.35
CDC42SE2-201ENST00000360515 ADAMTS3O15072 1205 aa6.61□□□□□ -1.35
CDC42SE2-201ENST00000360515 LRG1P02750 347 aa6.61□□□□□ -1.35
CDC42SE2-201ENST00000360515 IFNAR1P17181 557 aa6.61□□□□□ -1.35
CDC42SE2-201ENST00000360515 OR1D2P34982 312 aa6.61□□□□□ -1.35
CDC42SE2-201ENST00000360515 ECM1Q16610 540 aa6.61□□□□□ -1.35
CDC42SE2-201ENST00000360515 LMBRD2Q68DH5 695 aaPredicted RBP6.61□□□□□ -1.35
CDC42SE2-201ENST00000360515 SLC36A4Q6YBV0 504 aa6.61□□□□□ -1.35
CDC42SE2-201ENST00000360515 TOGARAM2Q6ZUX3 1019 aa6.61□□□□□ -1.35
CDC42SE2-201ENST00000360515 HEATR3Q7Z4Q2 680 aa6.61□□□□□ -1.35
CDC42SE2-201ENST00000360515 USP33Q8TEY7 942 aa6.61□□□□□ -1.35
CDC42SE2-201ENST00000360515 ZFP42Q96MM3 310 aa6.61□□□□□ -1.35
CDC42SE2-201ENST00000360515 PLEKHA5Q9HAU0 1116 aa6.61□□□□□ -1.35
CDC42SE2-201ENST00000360515 SEPT9Q9UHD8 586 aaPredicted RBP6.61□□□□□ -1.35
CDC42SE2-201ENST00000360515 MBD1Q9UIS9 605 aaPredicted RBP6.61□□□□□ -1.35
CDC42SE2-201ENST00000360515 EXTL3O43909 919 aa6.6□□□□□ -1.35
CDC42SE2-201ENST00000360515 CSPG5O95196 566 aa6.6□□□□□ -1.35
CDC42SE2-201ENST00000360515 CD72P21854 359 aa6.6□□□□□ -1.35
CDC42SE2-201ENST00000360515 TNFRSF4P43489 277 aa6.6□□□□□ -1.35
CDC42SE2-201ENST00000360515 SCAPQ12770 1279 aa6.6□□□□□ -1.35
CDC42SE2-201ENST00000360515 GRSF1Q12849 480 aaKnown RBP eCLIP6.6□□□□□ -1.35
CDC42SE2-201ENST00000360515 FOXC1Q12948 553 aa6.6□□□□□ -1.35
CDC42SE2-201ENST00000360515 CYP4A22Q5TCH4 519 aa6.6□□□□□ -1.35
CDC42SE2-201ENST00000360515 ANKRD45Q5TZF3 282 aa6.6□□□□□ -1.35
CDC42SE2-201ENST00000360515 CASC1Q6TDU7 716 aa6.6□□□□□ -1.35
CDC42SE2-201ENST00000360515 APBB1IPQ7Z5R6 666 aaPredicted RBP6.6□□□□□ -1.35
CDC42SE2-201ENST00000360515 CKAP2LQ8IYA6 745 aa6.6□□□□□ -1.35
CDC42SE2-201ENST00000360515 ZNF843Q8N446 348 aa6.6□□□□□ -1.35
CDC42SE2-201ENST00000360515 BPIFB1Q8TDL5 484 aa6.6□□□□□ -1.35
CDC42SE2-201ENST00000360515 ASAH2Q9NR71 780 aa6.6□□□□□ -1.35
CDC42SE2-201ENST00000360515 FBXL5Q9UKA1 691 aa6.6□□□□□ -1.35
CDC42SE2-201ENST00000360515 SLC6A14Q9UN76 642 aa6.6□□□□□ -1.35
CDC42SE2-201ENST00000360515 INPP5FQ9Y2H2 1132 aa6.6□□□□□ -1.35
CDC42SE2-201ENST00000360515 STARD13Q9Y3M8 1113 aa6.6□□□□□ -1.35
CDC42SE2-201ENST00000360515 AKAP13Q12802 2813 aa6.6□□□□□ -1.35
CDC42SE2-201ENST00000360515 STK36Q9NRP7 1315 aa6.6□□□□□ -1.35
CDC42SE2-201ENST00000360515 ERVH48-1M5A8F1 160 aa6.6□□□□□ -1.35
CDC42SE2-201ENST00000360515 RIOK3O14730 519 aaKnown RBP6.6□□□□□ -1.35
CDC42SE2-201ENST00000360515 NPTXRO95502 500 aa6.6□□□□□ -1.35
CDC42SE2-201ENST00000360515 HMGB1P09429 215 aaKnown RBP6.6□□□□□ -1.35
CDC42SE2-201ENST00000360515 C1QBPQ07021 282 aaKnown RBP6.6□□□□□ -1.35
CDC42SE2-201ENST00000360515 SERINC3Q13530 473 aa6.6□□□□□ -1.35
CDC42SE2-201ENST00000360515 ZNF77Q15935 545 aa6.6□□□□□ -1.35
CDC42SE2-201ENST00000360515 LIMS2Q7Z4I7 341 aa6.6□□□□□ -1.35
CDC42SE2-201ENST00000360515 TMEM150AQ86TG1 271 aa6.6□□□□□ -1.35
CDC42SE2-201ENST00000360515 ELMOD1Q8N336 334 aa6.6□□□□□ -1.35
CDC42SE2-201ENST00000360515 DNASE2BQ8WZ79 361 aa6.6□□□□□ -1.35
CDC42SE2-201ENST00000360515 MCRS1Q96EZ8 462 aa6.6□□□□□ -1.35
CDC42SE2-201ENST00000360515 CCDC136Q96JN2 1154 aa6.6□□□□□ -1.35
CDC42SE2-201ENST00000360515 PAAF1Q9BRP4 392 aa6.6□□□□□ -1.35
CDC42SE2-201ENST00000360515 ZSWIM4Q9H7M6 989 aa6.6□□□□□ -1.35
CDC42SE2-201ENST00000360515 BRPF3Q9ULD4 1205 aa6.6□□□□□ -1.35
CDC42SE2-201ENST00000360515 SLC8A2Q9UPR5 921 aa6.6□□□□□ -1.35
CDC42SE2-201ENST00000360515 PRG3Q9Y2Y8 225 aaPredicted RBP6.6□□□□□ -1.35
CDC42SE2-201ENST00000360515 NBEAQ8NFP9 2946 aa6.6□□□□□ -1.35
CDC42SE2-201ENST00000360515 SLC27A2O14975 620 aa6.59□□□□□ -1.35
CDC42SE2-201ENST00000360515 OLFM2O95897 454 aa6.59□□□□□ -1.35
CDC42SE2-201ENST00000360515 SSBP05455 408 aaKnown RBP eCLIP6.59□□□□□ -1.35
CDC42SE2-201ENST00000360515 C1SP09871 688 aa6.59□□□□□ -1.35
CDC42SE2-201ENST00000360515 CDC25CP30307 473 aa6.59□□□□□ -1.35
CDC42SE2-201ENST00000360515 NAMPTP43490 491 aa6.59□□□□□ -1.35
CDC42SE2-201ENST00000360515 DGKEP52429 567 aa6.59□□□□□ -1.35
CDC42SE2-201ENST00000360515 RTN1Q16799 776 aa6.59□□□□□ -1.35
CDC42SE2-201ENST00000360515 KRT25Q7Z3Z0 450 aa6.59□□□□□ -1.35
CDC42SE2-201ENST00000360515 ASAP3Q8TDY4 903 aa6.59□□□□□ -1.35
CDC42SE2-201ENST00000360515 HAS1Q92839 578 aa6.59□□□□□ -1.35
CDC42SE2-201ENST00000360515 CCDC86Q9H6F5 360 aaKnown RBP6.59□□□□□ -1.35
CDC42SE2-201ENST00000360515 THG1LQ9NWX6 298 aaKnown RBP6.59□□□□□ -1.35
CDC42SE2-201ENST00000360515 PCDHA4Q9UN74 947 aa6.59□□□□□ -1.35
CDC42SE2-201ENST00000360515 YIPF1Q9Y548 306 aa6.59□□□□□ -1.35
CDC42SE2-201ENST00000360515 PCDHGA1Q9Y5H4 931 aa6.59□□□□□ -1.35
CDC42SE2-201ENST00000360515 CDY1Q9Y6F8 540 aa6.59□□□□□ -1.35
CDC42SE2-201ENST00000360515 EML1O00423 815 aa6.59□□□□□ -1.35
CDC42SE2-201ENST00000360515 TOP3BO95985 862 aaKnown RBP6.59□□□□□ -1.35
CDC42SE2-201ENST00000360515 TKTP29401 623 aaKnown RBP6.59□□□□□ -1.35
CDC42SE2-201ENST00000360515 YWHABP31946 246 aaKnown RBP6.59□□□□□ -1.35
CDC42SE2-201ENST00000360515 MTERF2Q49AM1 385 aa6.59□□□□□ -1.35
CDC42SE2-201ENST00000360515 PKN3Q6P5Z2 889 aa6.59□□□□□ -1.35
CDC42SE2-201ENST00000360515 ITIH5Q86UX2 942 aa6.59□□□□□ -1.35
CDC42SE2-201ENST00000360515 ZNF579Q8NAF0 562 aaKnown RBP6.59□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms