RNA–Protein interactions for RNA: ENST00000359422.8

LMBR1-202, Transcript of limb development membrane protein 1, humanhuman

TSL 5 BASIC

Gene LMBR1, Length 4,727 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMBR1-202ENST00000359422 MAGEA4P43358 317 aa17.11■□□□□ 0.33
LMBR1-202ENST00000359422 CDR2LQ86X02 465 aaPredicted RBP17.11■□□□□ 0.33
LMBR1-202ENST00000359422 ATPAF2Q8N5M1 289 aa17.11■□□□□ 0.33
LMBR1-202ENST00000359422 ERGIC2Q96RQ1 377 aa17.11■□□□□ 0.33
LMBR1-202ENST00000359422 PCMTD2Q9NV79 361 aa17.11■□□□□ 0.33
LMBR1-202ENST00000359422 GPR75-ASB3A0A0A6YYF3 556 aa17.11■□□□□ 0.33
LMBR1-202ENST00000359422 HIST1H2AGP0C0S8 130 aaPredicted RBP17.11■□□□□ 0.33
LMBR1-202ENST00000359422 HIST1H2ADP20671 130 aa17.11■□□□□ 0.33
LMBR1-202ENST00000359422 FLOT2Q14254 428 aa17.11■□□□□ 0.33
LMBR1-202ENST00000359422 C16orf87Q6PH81 154 aa17.11■□□□□ 0.33
LMBR1-202ENST00000359422 MFN1Q8IWA4 741 aa17.11■□□□□ 0.33
LMBR1-202ENST00000359422 ENGASEQ8NFI3 743 aa17.11■□□□□ 0.33
LMBR1-202ENST00000359422 SCFD2Q8WU76 684 aa17.11■□□□□ 0.33
LMBR1-202ENST00000359422 HIST1H2AHQ96KK5 128 aa17.11■□□□□ 0.33
LMBR1-202ENST00000359422 HIST1H2AJQ99878 128 aa17.11■□□□□ 0.33
LMBR1-202ENST00000359422 H2AFJQ9BTM1 129 aa17.11■□□□□ 0.33
LMBR1-202ENST00000359422 NIF3L1Q9GZT8 377 aa17.11■□□□□ 0.33
LMBR1-202ENST00000359422 TMEM39BQ9GZU3 492 aa17.11■□□□□ 0.33
LMBR1-202ENST00000359422 HPS5Q9UPZ3 1129 aa17.11■□□□□ 0.33
LMBR1-202ENST00000359422 ARHGAP10A1A4S6 786 aa17.11■□□□□ 0.33
LMBR1-202ENST00000359422 EIF3HO15372 352 aaKnown RBP eCLIP17.11■□□□□ 0.33
LMBR1-202ENST00000359422 TKFCQ3LXA3 575 aa17.11■□□□□ 0.33
LMBR1-202ENST00000359422 MAP3K14Q99558 947 aa17.11■□□□□ 0.33
LMBR1-202ENST00000359422 FOXP3Q9BZS1 431 aa17.11■□□□□ 0.33
LMBR1-202ENST00000359422 RSAD1Q9HA92 442 aa17.11■□□□□ 0.33
LMBR1-202ENST00000359422 PAK5Q9P286 719 aa17.11■□□□□ 0.33
LMBR1-202ENST00000359422 SLC30A1Q9Y6M5 507 aa17.11■□□□□ 0.33
LMBR1-202ENST00000359422 IGSF9BQ9UPX0 1349 aa17.1■□□□□ 0.33
LMBR1-202ENST00000359422 EIF3DO15371 548 aaKnown RBP eCLIP17.1■□□□□ 0.33
LMBR1-202ENST00000359422 GTF2H1P32780 548 aa17.1■□□□□ 0.33
LMBR1-202ENST00000359422 RFC5P40937 340 aa17.1■□□□□ 0.33
LMBR1-202ENST00000359422 DCAF6Q58WW2 860 aa17.1■□□□□ 0.33
LMBR1-202ENST00000359422 LRIG3Q6UXM1 1119 aa17.1■□□□□ 0.33
LMBR1-202ENST00000359422 EFHBQ8N7U6 833 aa17.1■□□□□ 0.33
LMBR1-202ENST00000359422 USP38Q8NB14 1042 aa17.1■□□□□ 0.33
LMBR1-202ENST00000359422 ERP27Q96DN0 273 aa17.1■□□□□ 0.33
LMBR1-202ENST00000359422 ZNF512Q96ME7 567 aaPredicted RBP17.1■□□□□ 0.33
LMBR1-202ENST00000359422 GPBP1L1Q9HC44 474 aaPredicted RBP17.1■□□□□ 0.33
LMBR1-202ENST00000359422 ARHGEF38Q9NXL2 777 aa17.1■□□□□ 0.33
LMBR1-202ENST00000359422 SLC26A4O43511 780 aa17.1■□□□□ 0.33
LMBR1-202ENST00000359422 NDUFS3O75489 264 aa17.1■□□□□ 0.33
LMBR1-202ENST00000359422 CYP2B6P20813 491 aa17.1■□□□□ 0.33
LMBR1-202ENST00000359422 SERPINB9P50453 376 aa17.1■□□□□ 0.33
LMBR1-202ENST00000359422 RPS6P62753 249 aaKnown RBP17.1■□□□□ 0.33
LMBR1-202ENST00000359422 PDAP1Q13442 181 aaKnown RBP17.1■□□□□ 0.33
LMBR1-202ENST00000359422 LRRC36Q1X8D7 754 aa17.1■□□□□ 0.33
LMBR1-202ENST00000359422 ATG4CQ96DT6 458 aa17.1■□□□□ 0.33
LMBR1-202ENST00000359422 TASP1Q9H6P5 420 aa17.1■□□□□ 0.33
LMBR1-202ENST00000359422 PRMT7Q9NVM4 692 aaPredicted RBP17.1■□□□□ 0.33
LMBR1-202ENST00000359422 SHROOM2Q13796 1616 aa17.1■□□□□ 0.33
LMBR1-202ENST00000359422 TMEM120BA0PK00 339 aa17.1■□□□□ 0.33
LMBR1-202ENST00000359422 PPP1R3GB7ZBB8 358 aa17.1■□□□□ 0.33
LMBR1-202ENST00000359422 CYTH1Q15438 398 aa17.1■□□□□ 0.33
LMBR1-202ENST00000359422 IER5Q5VY09 327 aa17.1■□□□□ 0.33
LMBR1-202ENST00000359422 GJB7Q6PEY0 223 aa17.1■□□□□ 0.33
LMBR1-202ENST00000359422 GGA3Q9NZ52 723 aa17.1■□□□□ 0.33
LMBR1-202ENST00000359422 PLAGL2Q9UPG8 496 aa17.1■□□□□ 0.33
LMBR1-202ENST00000359422 CD4P01730 458 aa17.09■□□□□ 0.33
LMBR1-202ENST00000359422 CYBBP04839 570 aa17.09■□□□□ 0.33
LMBR1-202ENST00000359422 CYP2C9P11712 490 aa17.09■□□□□ 0.33
LMBR1-202ENST00000359422 SEC24CP53992 1094 aa17.09■□□□□ 0.33
LMBR1-202ENST00000359422 PTK7Q13308 1070 aa17.09■□□□□ 0.33
LMBR1-202ENST00000359422 TRADDQ15628 312 aa17.09■□□□□ 0.33
LMBR1-202ENST00000359422 UBA3Q8TBC4 463 aa17.09■□□□□ 0.33
LMBR1-202ENST00000359422 FBXO28Q9NVF7 368 aa17.09■□□□□ 0.33
LMBR1-202ENST00000359422 A0A1W2PQJ5 194 aa17.09■□□□□ 0.33
LMBR1-202ENST00000359422 EEF2KO00418 725 aaKnown RBP17.09■□□□□ 0.33
LMBR1-202ENST00000359422 LSP1P33241 339 aa17.09■□□□□ 0.33
LMBR1-202ENST00000359422 SPRP35270 261 aaPredicted RBP17.09■□□□□ 0.33
LMBR1-202ENST00000359422 SPDYAQ5MJ70 313 aa17.09■□□□□ 0.33
LMBR1-202ENST00000359422 EFCAB12Q6NXP0 572 aa17.09■□□□□ 0.33
LMBR1-202ENST00000359422 RAET1EQ8TD07 263 aa17.09■□□□□ 0.33
LMBR1-202ENST00000359422 ZIM3Q96PE6 472 aa17.09■□□□□ 0.33
LMBR1-202ENST00000359422 KDM4CQ9H3R0 1056 aa17.09■□□□□ 0.33
LMBR1-202ENST00000359422 TRIM45Q9H8W5 580 aaPredicted RBP17.09■□□□□ 0.33
LMBR1-202ENST00000359422 ASMTLO95671 621 aa17.09■□□□□ 0.33
LMBR1-202ENST00000359422 ABCE1P61221 599 aaKnown RBP17.09■□□□□ 0.33
LMBR1-202ENST00000359422 PCSK7Q16549 785 aa17.09■□□□□ 0.33
LMBR1-202ENST00000359422 TMA16Q96EY4 203 aaKnown RBP17.09■□□□□ 0.33
LMBR1-202ENST00000359422 STAMBPL1Q96FJ0 436 aa17.09■□□□□ 0.33
LMBR1-202ENST00000359422 DDX50Q9BQ39 737 aaKnown RBP17.09■□□□□ 0.33
LMBR1-202ENST00000359422 TET3O43151 1660 aa17.09■□□□□ 0.33
LMBR1-202ENST00000359422 P4HA2O15460 535 aa17.09■□□□□ 0.33
LMBR1-202ENST00000359422 SNRPAP09012 282 aaKnown RBP17.09■□□□□ 0.33
LMBR1-202ENST00000359422 CYP11B2P19099 503 aa17.09■□□□□ 0.33
LMBR1-202ENST00000359422 HLA-DPA1P20036 260 aa17.09■□□□□ 0.33
LMBR1-202ENST00000359422 ITGA8P53708 1063 aa17.09■□□□□ 0.33
LMBR1-202ENST00000359422 SLC29A2Q14542 456 aa17.09■□□□□ 0.33
LMBR1-202ENST00000359422 NUP93Q8N1F7 819 aa17.09■□□□□ 0.33
LMBR1-202ENST00000359422 TEKT4Q8WW24 435 aa17.09■□□□□ 0.33
LMBR1-202ENST00000359422 IL17RAQ96F46 866 aa17.09■□□□□ 0.33
LMBR1-202ENST00000359422 ANKEF1Q9NU02 776 aa17.09■□□□□ 0.33
LMBR1-202ENST00000359422 KDM6AO15550 1401 aaPredicted RBP17.08■□□□□ 0.33
LMBR1-202ENST00000359422 SEC24DO94855 1032 aaPredicted RBP17.08■□□□□ 0.33
LMBR1-202ENST00000359422 PCSK1P29120 753 aa17.08■□□□□ 0.33
LMBR1-202ENST00000359422 IL31Q6EBC2 164 aa17.08■□□□□ 0.33
LMBR1-202ENST00000359422 FEZF2Q8TBJ5 459 aa17.08■□□□□ 0.33
LMBR1-202ENST00000359422 SH3TC2Q8TF17 1288 aa17.08■□□□□ 0.33
LMBR1-202ENST00000359422 DEFB129Q9H1M3 183 aa17.08■□□□□ 0.33
LMBR1-202ENST00000359422 SLC24A3Q9HC58 644 aa17.08■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 62.8 ms