RNA–Protein interactions for RNA: ENST00000358730.6

RFX3-202, Transcript of regulatory factor X3, humanhuman

TSL 1 (best) BASIC

Gene RFX3, Length 2,971 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFX3-202ENST00000358730 REPS2Q8NFH8 660 aa9.12□□□□□ -0.95
RFX3-202ENST00000358730 GDAP1Q8TB36 358 aa9.12□□□□□ -0.95
RFX3-202ENST00000358730 ASAP3Q8TDY4 903 aa9.12□□□□□ -0.95
RFX3-202ENST00000358730 C9orf72Q96LT7 481 aa9.12□□□□□ -0.95
RFX3-202ENST00000358730 MSTO1Q9BUK6 570 aa9.12□□□□□ -0.95
RFX3-202ENST00000358730 VPS33BQ9H267 617 aa9.12□□□□□ -0.95
RFX3-202ENST00000358730 ZNF214Q9UL59 606 aaPredicted RBP9.12□□□□□ -0.95
RFX3-202ENST00000358730 SIP14410 1827 aa9.12□□□□□ -0.95
RFX3-202ENST00000358730 GH1P01241 217 aa9.12□□□□□ -0.95
RFX3-202ENST00000358730 GSTA1P08263 222 aa9.12□□□□□ -0.95
RFX3-202ENST00000358730 HMGCS2P54868 508 aa9.12□□□□□ -0.95
RFX3-202ENST00000358730 EN1Q05925 392 aaPredicted RBP9.12□□□□□ -0.95
RFX3-202ENST00000358730 NBPF12Q5TAG4 269 aaPredicted RBP9.12□□□□□ -0.95
RFX3-202ENST00000358730 KAZNQ674X7 775 aa9.12□□□□□ -0.95
RFX3-202ENST00000358730 NUGGCQ68CJ6 796 aa9.12□□□□□ -0.95
RFX3-202ENST00000358730 CYP4F22Q6NT55 531 aa9.12□□□□□ -0.95
RFX3-202ENST00000358730 ANKS1BQ7Z6G8 1248 aa9.12□□□□□ -0.95
RFX3-202ENST00000358730 SRRM1Q8IYB3 904 aaKnown RBP9.12□□□□□ -0.95
RFX3-202ENST00000358730 BBOF1Q8ND07 529 aa9.12□□□□□ -0.95
RFX3-202ENST00000358730 EXD1Q8NHP7 514 aa9.12□□□□□ -0.95
RFX3-202ENST00000358730 ZNF526Q8TF50 670 aaPredicted RBP9.12□□□□□ -0.95
RFX3-202ENST00000358730 JDP2Q8WYK2 163 aa9.12□□□□□ -0.95
RFX3-202ENST00000358730 TARS2Q9BW92 718 aaKnown RBP9.12□□□□□ -0.95
RFX3-202ENST00000358730 A1CFQ9NQ94 594 aaKnown RBP9.12□□□□□ -0.95
RFX3-202ENST00000358730 NEU2Q9Y3R4 380 aa9.12□□□□□ -0.95
RFX3-202ENST00000358730 ZNF541Q9H0D2 1346 aa9.11□□□□□ -0.95
RFX3-202ENST00000358730 PI4K2BG5E9Z4 385 aa9.11□□□□□ -0.95
RFX3-202ENST00000358730 K7ERI5 159 aa9.11□□□□□ -0.95
RFX3-202ENST00000358730 CDH16O75309 829 aa9.11□□□□□ -0.95
RFX3-202ENST00000358730 CETPP11597 493 aa9.11□□□□□ -0.95
RFX3-202ENST00000358730 ATF7P17544 494 aaPredicted RBP9.11□□□□□ -0.95
RFX3-202ENST00000358730 GLRA2P23416 452 aa9.11□□□□□ -0.95
RFX3-202ENST00000358730 TBXAS1P24557 533 aaPredicted RBP9.11□□□□□ -0.95
RFX3-202ENST00000358730 NF2P35240 595 aa9.11□□□□□ -0.95
RFX3-202ENST00000358730 NAMPTP43490 491 aa9.11□□□□□ -0.95
RFX3-202ENST00000358730 C1QBPQ07021 282 aaKnown RBP9.11□□□□□ -0.95
RFX3-202ENST00000358730 ADCY1Q08828 1119 aa9.11□□□□□ -0.95
RFX3-202ENST00000358730 P3H1Q32P28 736 aa9.11□□□□□ -0.95
RFX3-202ENST00000358730 ZNF772Q68DY9 489 aaPredicted RBP9.11□□□□□ -0.95
RFX3-202ENST00000358730 PLEKHA7Q6IQ23 1121 aa9.11□□□□□ -0.95
RFX3-202ENST00000358730 HIBCHQ6NVY1 386 aaPredicted RBP9.11□□□□□ -0.95
RFX3-202ENST00000358730 PHF13Q86YI8 300 aaPredicted RBP9.11□□□□□ -0.95
RFX3-202ENST00000358730 ZNF280CQ8ND82 737 aa9.11□□□□□ -0.95
RFX3-202ENST00000358730 ZKSCAN4Q969J2 545 aaPredicted RBP9.11□□□□□ -0.95
RFX3-202ENST00000358730 VCPIP1Q96JH7 1222 aa9.11□□□□□ -0.95
RFX3-202ENST00000358730 CGRRF1Q99675 332 aa9.11□□□□□ -0.95
RFX3-202ENST00000358730 CYP39A1Q9NYL5 469 aa9.11□□□□□ -0.95
RFX3-202ENST00000358730 FBXO40Q9UH90 709 aa9.11□□□□□ -0.95
RFX3-202ENST00000358730 GGT7Q9UJ14 662 aa9.11□□□□□ -0.95
RFX3-202ENST00000358730 USP15Q9Y4E8 981 aaPredicted RBP9.11□□□□□ -0.95
RFX3-202ENST00000358730 NUB1Q9Y5A7 615 aa9.11□□□□□ -0.95
RFX3-202ENST00000358730 STYXL1Q9Y6J8 313 aa9.11□□□□□ -0.95
RFX3-202ENST00000358730 SPATA31C2B4DYI2 1134 aa9.11□□□□□ -0.95
RFX3-202ENST00000358730 OAS1P00973 400 aaKnown RBP9.11□□□□□ -0.95
RFX3-202ENST00000358730 OATP04181 439 aa9.11□□□□□ -0.95
RFX3-202ENST00000358730 KRT1P04264 644 aa9.11□□□□□ -0.95
RFX3-202ENST00000358730 KRT10P13645 584 aa9.11□□□□□ -0.95
RFX3-202ENST00000358730 CETN2P41208 172 aa9.11□□□□□ -0.95
RFX3-202ENST00000358730 OAZ1P54368 228 aa9.11□□□□□ -0.95
RFX3-202ENST00000358730 NFX1Q12986 1120 aaKnown RBP9.11□□□□□ -0.95
RFX3-202ENST00000358730 NCOA4Q13772 614 aa9.11□□□□□ -0.95
RFX3-202ENST00000358730 TMEM132BQ14DG7 1078 aa9.11□□□□□ -0.95
RFX3-202ENST00000358730 SEZ6Q53EL9 994 aa9.11□□□□□ -0.95
RFX3-202ENST00000358730 SLFN12LQ6IEE8 588 aa9.11□□□□□ -0.95
RFX3-202ENST00000358730 SEPT14Q6ZU15 432 aa9.11□□□□□ -0.95
RFX3-202ENST00000358730 CCDC91Q7Z6B0 441 aa9.11□□□□□ -0.95
RFX3-202ENST00000358730 SCYL3Q8IZE3 742 aa9.11□□□□□ -0.95
RFX3-202ENST00000358730 CYP4X1Q8N118 509 aa9.11□□□□□ -0.95
RFX3-202ENST00000358730 CCDC63Q8NA47 563 aa9.11□□□□□ -0.95
RFX3-202ENST00000358730 OR5B17Q8NGF7 314 aa9.11□□□□□ -0.95
RFX3-202ENST00000358730 FEZF2Q8TBJ5 459 aa9.11□□□□□ -0.95
RFX3-202ENST00000358730 SLC7A3Q8WY07 619 aa9.11□□□□□ -0.95
RFX3-202ENST00000358730 WRNIP1Q96S55 665 aa9.11□□□□□ -0.95
RFX3-202ENST00000358730 TEX13BQ9BXU2 312 aa9.11□□□□□ -0.95
RFX3-202ENST00000358730 IMPG2Q9BZV3 1241 aa9.11□□□□□ -0.95
RFX3-202ENST00000358730 PORCNQ9H237 461 aa9.11□□□□□ -0.95
RFX3-202ENST00000358730 ACAD9Q9H845 621 aa9.11□□□□□ -0.95
RFX3-202ENST00000358730 AS3MTQ9HBK9 375 aa9.11□□□□□ -0.95
RFX3-202ENST00000358730 ZNF302Q9NR11 478 aa9.11□□□□□ -0.95
RFX3-202ENST00000358730 PICK1Q9NRD5 415 aa9.11□□□□□ -0.95
RFX3-202ENST00000358730 PARVAQ9NVD7 372 aa9.11□□□□□ -0.95
RFX3-202ENST00000358730 KCNG1Q9UIX4 513 aa9.11□□□□□ -0.95
RFX3-202ENST00000358730 HACL1Q9UJ83 578 aa9.11□□□□□ -0.95
RFX3-202ENST00000358730 TPX2Q9ULW0 747 aaKnown RBP9.11□□□□□ -0.95
RFX3-202ENST00000358730 LCTP09848 1927 aa9.1□□□□□ -0.95
RFX3-202ENST00000358730 TCEA3O75764 348 aa9.1□□□□□ -0.95
RFX3-202ENST00000358730 SUN1O94901 812 aa9.1□□□□□ -0.95
RFX3-202ENST00000358730 LDHAP00338 332 aaKnown RBP9.1□□□□□ -0.95
RFX3-202ENST00000358730 TCF4P15884 667 aa9.1□□□□□ -0.95
RFX3-202ENST00000358730 STX2P32856 288 aa9.1□□□□□ -0.95
RFX3-202ENST00000358730 RPL7AP62424 266 aaKnown RBP9.1□□□□□ -0.95
RFX3-202ENST00000358730 SP2Q02086 613 aa9.1□□□□□ -0.95
RFX3-202ENST00000358730 MPP2Q14168 576 aa9.1□□□□□ -0.95
RFX3-202ENST00000358730 TMED2Q15363 201 aa9.1□□□□□ -0.95
RFX3-202ENST00000358730 SAMD7Q7Z3H4 446 aa9.1□□□□□ -0.95
RFX3-202ENST00000358730 TGS1Q96RS0 853 aaKnown RBP9.1□□□□□ -0.95
RFX3-202ENST00000358730 RBM15Q96T37 977 aaKnown RBP eCLIP9.1□□□□□ -0.95
RFX3-202ENST00000358730 CCDC77Q9BR77 488 aa9.1□□□□□ -0.95
RFX3-202ENST00000358730 IP6K2Q9UHH9 426 aa9.1□□□□□ -0.95
RFX3-202ENST00000358730 LGALS13Q9UHV8 139 aa9.1□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms