RNA–Protein interactions for RNA: ENST00000357890.9

RNF40-202, Transcript of ring finger protein 40, humanhuman

TSL 2 BASIC

Gene RNF40, Length 3,917 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF40-202ENST00000357890 C2CD6Q53TS8 623 aa10.55□□□□□ -0.72
RNF40-202ENST00000357890 OTOP1Q7RTM1 612 aa10.55□□□□□ -0.72
RNF40-202ENST00000357890 NLRP9Q7RTR0 991 aa10.55□□□□□ -0.72
RNF40-202ENST00000357890 ATG4AQ8WYN0 398 aa10.55□□□□□ -0.72
RNF40-202ENST00000357890 SPOCK2Q92563 424 aa10.55□□□□□ -0.72
RNF40-202ENST00000357890 POP1Q99575 1024 aaKnown RBP10.55□□□□□ -0.72
RNF40-202ENST00000357890 ZSWIM1Q9BR11 485 aa10.55□□□□□ -0.72
RNF40-202ENST00000357890 THTPAQ9BU02 230 aa10.55□□□□□ -0.72
RNF40-202ENST00000357890 TRIM55Q9BYV6 548 aa10.55□□□□□ -0.72
RNF40-202ENST00000357890 WNT8AQ9H1J5 351 aa10.55□□□□□ -0.72
RNF40-202ENST00000357890 TRABDQ9H4I3 376 aa10.55□□□□□ -0.72
RNF40-202ENST00000357890 DNAJC18Q9H819 358 aa10.55□□□□□ -0.72
RNF40-202ENST00000357890 CYP4F11Q9HBI6 524 aa10.55□□□□□ -0.72
RNF40-202ENST00000357890 PCDHAC2Q9Y5I4 1007 aa10.55□□□□□ -0.72
RNF40-202ENST00000357890 WNK3Q9BYP7 1800 aa10.55□□□□□ -0.72
RNF40-202ENST00000357890 UBE4BO95155 1302 aa10.55□□□□□ -0.72
RNF40-202ENST00000357890 ZBED4O75132 1171 aa10.55□□□□□ -0.72
RNF40-202ENST00000357890 CYP3A4P08684 503 aa10.55□□□□□ -0.72
RNF40-202ENST00000357890 AOC3Q16853 763 aa10.55□□□□□ -0.72
RNF40-202ENST00000357890 LRRC74BQ6ZQY2 392 aa10.55□□□□□ -0.72
RNF40-202ENST00000357890 CENPTQ96BT3 561 aa10.55□□□□□ -0.72
RNF40-202ENST00000357890 GRAMD1AQ96CP6 724 aa10.55□□□□□ -0.72
RNF40-202ENST00000357890 MPP4Q96JB8 637 aa10.55□□□□□ -0.72
RNF40-202ENST00000357890 CLMNQ96JQ2 1002 aa10.55□□□□□ -0.72
RNF40-202ENST00000357890 PWWP2AQ96N64 755 aa10.55□□□□□ -0.72
RNF40-202ENST00000357890 ZNF317Q96PQ6 595 aaPredicted RBP10.55□□□□□ -0.72
RNF40-202ENST00000357890 CBWD1Q9BRT8 395 aa10.55□□□□□ -0.72
RNF40-202ENST00000357890 RMI1Q9H9A7 625 aa10.55□□□□□ -0.72
RNF40-202ENST00000357890 CLIC5Q9NZA1 410 aa10.55□□□□□ -0.72
RNF40-202ENST00000357890 PDP2Q9P2J9 529 aa10.55□□□□□ -0.72
RNF40-202ENST00000357890 GTF3C5Q9Y5Q8 519 aaPredicted RBP10.55□□□□□ -0.72
RNF40-202ENST00000357890 IGSF9BQ9UPX0 1349 aa10.55□□□□□ -0.72
RNF40-202ENST00000357890 RREB1Q92766 1687 aa10.55□□□□□ -0.72
RNF40-202ENST00000357890 H3BRJ5 948 aa10.55□□□□□ -0.72
RNF40-202ENST00000357890 O00370 1275 aa10.55□□□□□ -0.72
RNF40-202ENST00000357890 SGPL1O95470 568 aa10.55□□□□□ -0.72
RNF40-202ENST00000357890 ACADSP16219 412 aa10.55□□□□□ -0.72
RNF40-202ENST00000357890 POLGP54098 1239 aaPredicted RBP10.55□□□□□ -0.72
RNF40-202ENST00000357890 SPIRE1Q08AE8 756 aa10.55□□□□□ -0.72
RNF40-202ENST00000357890 MKRN3Q13064 507 aaKnown RBP10.55□□□□□ -0.72
RNF40-202ENST00000357890 PPP2R5CQ13362 524 aa10.55□□□□□ -0.72
RNF40-202ENST00000357890 HAUS6Q7Z4H7 955 aa10.55□□□□□ -0.72
RNF40-202ENST00000357890 PIGWQ7Z7B1 504 aa10.55□□□□□ -0.72
RNF40-202ENST00000357890 GRK7Q8WTQ7 553 aa10.55□□□□□ -0.72
RNF40-202ENST00000357890 C1orf112Q9NSG2 853 aa10.55□□□□□ -0.72
RNF40-202ENST00000357890 MARCOQ9UEW3 520 aaPredicted RBP10.55□□□□□ -0.72
RNF40-202ENST00000357890 PFASO15067 1338 aa10.55□□□□□ -0.72
RNF40-202ENST00000357890 CCDC22O60826 627 aa10.54□□□□□ -0.72
RNF40-202ENST00000357890 PYGMP11217 842 aa10.54□□□□□ -0.72
RNF40-202ENST00000357890 SSTR3P32745 418 aaPredicted RBP10.54□□□□□ -0.72
RNF40-202ENST00000357890 CCNFP41002 786 aa10.54□□□□□ -0.72
RNF40-202ENST00000357890 ECE1P42892 770 aa10.54□□□□□ -0.72
RNF40-202ENST00000357890 LIN9Q5TKA1 542 aa10.54□□□□□ -0.72
RNF40-202ENST00000357890 TATDN1Q6P1N9 297 aa10.54□□□□□ -0.72
RNF40-202ENST00000357890 ECHDC2Q86YB7 292 aa10.54□□□□□ -0.72
RNF40-202ENST00000357890 TRIM42Q8IWZ5 723 aa10.54□□□□□ -0.72
RNF40-202ENST00000357890 DRAXINQ8NBI3 349 aaPredicted RBP10.54□□□□□ -0.72
RNF40-202ENST00000357890 KAT5Q92993 513 aa10.54□□□□□ -0.72
RNF40-202ENST00000357890 MRIQ9BWK5 157 aa10.54□□□□□ -0.72
RNF40-202ENST00000357890 TMEM59LQ9UK28 342 aa10.54□□□□□ -0.72
RNF40-202ENST00000357890 VAV3Q9UKW4 847 aa10.54□□□□□ -0.72
RNF40-202ENST00000357890 B2RBV5 119 aa10.54□□□□□ -0.72
RNF40-202ENST00000357890 H0YGN5 161 aa10.54□□□□□ -0.72
RNF40-202ENST00000357890 LIN7AO14910 233 aaPredicted RBP10.54□□□□□ -0.72
RNF40-202ENST00000357890 COILP38432 576 aaPredicted RBP10.54□□□□□ -0.72
RNF40-202ENST00000357890 MED21Q13503 144 aa10.54□□□□□ -0.72
RNF40-202ENST00000357890 MAP7D1Q3KQU3 841 aa10.54□□□□□ -0.72
RNF40-202ENST00000357890 C1orf186Q6ZWK4 172 aa10.54□□□□□ -0.72
RNF40-202ENST00000357890 SLC13A5Q86YT5 568 aaPredicted RBP10.54□□□□□ -0.72
RNF40-202ENST00000357890 PASD1Q8IV76 773 aa10.54□□□□□ -0.72
RNF40-202ENST00000357890 ATXN2LQ8WWM7 1075 aaKnown RBP10.54□□□□□ -0.72
RNF40-202ENST00000357890 OLFM3Q96PB7 478 aa10.54□□□□□ -0.72
RNF40-202ENST00000357890 HSD17B14Q9BPX1 270 aa10.54□□□□□ -0.72
RNF40-202ENST00000357890 HEY2Q9UBP5 337 aa10.54□□□□□ -0.72
RNF40-202ENST00000357890 NFS1Q9Y697 457 aa10.54□□□□□ -0.72
RNF40-202ENST00000357890 CCDC195A0A1B0GUA6 201 aa10.54□□□□□ -0.72
RNF40-202ENST00000357890 TTC36A6NLP5 189 aa10.54□□□□□ -0.72
RNF40-202ENST00000357890 KIAA0391O15091 583 aaKnown RBP10.54□□□□□ -0.72
RNF40-202ENST00000357890 CDH16O75309 829 aa10.54□□□□□ -0.72
RNF40-202ENST00000357890 STAMBPO95630 424 aa10.54□□□□□ -0.72
RNF40-202ENST00000357890 P4HBP07237 508 aaKnown RBP10.54□□□□□ -0.72
RNF40-202ENST00000357890 EIF2AK2P19525 551 aaKnown RBP10.54□□□□□ -0.72
RNF40-202ENST00000357890 DLG4P78352 724 aa10.54□□□□□ -0.72
RNF40-202ENST00000357890 DMP1Q13316 513 aaPredicted RBP10.54□□□□□ -0.72
RNF40-202ENST00000357890 RASA3Q14644 834 aa10.54□□□□□ -0.72
RNF40-202ENST00000357890 SLC15A2Q16348 729 aa10.54□□□□□ -0.72
RNF40-202ENST00000357890 RABGAP1LQ5R372 815 aa10.54□□□□□ -0.72
RNF40-202ENST00000357890 DACT2Q5SW24 774 aa10.54□□□□□ -0.72
RNF40-202ENST00000357890 DCUN1D2Q6PH85 259 aa10.54□□□□□ -0.72
RNF40-202ENST00000357890 LDHDQ86WU2 507 aa10.54□□□□□ -0.72
RNF40-202ENST00000357890 MCF2L2Q86YR7 1114 aa10.54□□□□□ -0.72
RNF40-202ENST00000357890 ZC3H3Q8IXZ2 948 aaKnown RBP10.54□□□□□ -0.72
RNF40-202ENST00000357890 ACER1Q8TDN7 264 aa10.54□□□□□ -0.72
RNF40-202ENST00000357890 PREBQ9HCU5 417 aa10.54□□□□□ -0.72
RNF40-202ENST00000357890 HSPBP1Q9NZL4 362 aa10.54□□□□□ -0.72
RNF40-202ENST00000357890 ARP10275 920 aa10.53□□□□□ -0.72
RNF40-202ENST00000357890 MUTP22033 750 aa10.53□□□□□ -0.72
RNF40-202ENST00000357890 POLD1P28340 1107 aa10.53□□□□□ -0.72
RNF40-202ENST00000357890 SH3BGRP55822 239 aaPredicted RBP10.53□□□□□ -0.72
RNF40-202ENST00000357890 MMEL1Q495T6 779 aa10.53□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms