RNA–Protein interactions for RNA: ENST00000357732.8

RTN4-204, Transcript of reticulon 4, humanhuman

TSL 1 (best) BASIC

Gene RTN4, Length 2,390 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4-204ENST00000357732 GGT7Q9UJ14 662 aa18.77■□□□□ 0.6
RTN4-204ENST00000357732 DNALI1O14645 258 aaPredicted RBP18.76■□□□□ 0.59
RTN4-204ENST00000357732 HNRNPCL1O60812 293 aaKnown RBP18.76■□□□□ 0.59
RTN4-204ENST00000357732 C1QBPQ07021 282 aaKnown RBP18.76■□□□□ 0.59
RTN4-204ENST00000357732 PDK4Q16654 411 aa18.76■□□□□ 0.59
RTN4-204ENST00000357732 FKBP1CQ5VVH2 108 aa18.76■□□□□ 0.59
RTN4-204ENST00000357732 SLC39A4Q6P5W5 647 aa18.76■□□□□ 0.59
RTN4-204ENST00000357732 RCOR2Q8IZ40 523 aa18.76■□□□□ 0.59
RTN4-204ENST00000357732 SH3TC2Q8TF17 1288 aa18.76■□□□□ 0.59
RTN4-204ENST00000357732 KCNN1Q92952 543 aa18.76■□□□□ 0.59
RTN4-204ENST00000357732 SENP7Q9BQF6 1050 aa18.76■□□□□ 0.59
RTN4-204ENST00000357732 MLXIPLQ9NP71 852 aa18.76■□□□□ 0.59
RTN4-204ENST00000357732 TOPORSQ9NS56 1045 aaPredicted RBP18.76■□□□□ 0.59
RTN4-204ENST00000357732 ADAM22Q9P0K1 906 aa18.76■□□□□ 0.59
RTN4-204ENST00000357732 TBK1Q9UHD2 729 aa18.76■□□□□ 0.59
RTN4-204ENST00000357732 SLC24A2Q9UI40 661 aa18.76■□□□□ 0.59
RTN4-204ENST00000357732 CNTNAP1P78357 1384 aa18.76■□□□□ 0.59
RTN4-204ENST00000357732 PSME4Q14997 1843 aa18.76■□□□□ 0.59
RTN4-204ENST00000357732 FOXN2P32314 431 aa18.76■□□□□ 0.59
RTN4-204ENST00000357732 WDR4P57081 412 aaKnown RBP18.76■□□□□ 0.59
RTN4-204ENST00000357732 NAA25Q14CX7 972 aa18.76■□□□□ 0.59
RTN4-204ENST00000357732 MORF4L2Q15014 288 aa18.76■□□□□ 0.59
RTN4-204ENST00000357732 UGCGQ16739 394 aa18.76■□□□□ 0.59
RTN4-204ENST00000357732 CCDC142Q17RM4 750 aa18.76■□□□□ 0.59
RTN4-204ENST00000357732 TBC1D10BQ4KMP7 808 aaPredicted RBP18.76■□□□□ 0.59
RTN4-204ENST00000357732 ZC3H12AQ5D1E8 599 aaKnown RBP18.76■□□□□ 0.59
RTN4-204ENST00000357732 LRRC38Q5VT99 294 aa18.76■□□□□ 0.59
RTN4-204ENST00000357732 XRRA1Q6P2D8 792 aa18.76■□□□□ 0.59
RTN4-204ENST00000357732 ZNF398Q8TD17 642 aa18.76■□□□□ 0.59
RTN4-204ENST00000357732 ETNK1Q9HBU6 452 aa18.76■□□□□ 0.59
RTN4-204ENST00000357732 DRG1Q9Y295 367 aaKnown RBP18.76■□□□□ 0.59
RTN4-204ENST00000357732 TMEM150BA6NC51 233 aa18.75■□□□□ 0.59
RTN4-204ENST00000357732 HSPA1LP34931 641 aa18.75■□□□□ 0.59
RTN4-204ENST00000357732 PTPN7P35236 360 aa18.75■□□□□ 0.59
RTN4-204ENST00000357732 MKRN4PQ13434 485 aaPredicted RBP18.75■□□□□ 0.59
RTN4-204ENST00000357732 MOGSQ13724 837 aa18.75■□□□□ 0.59
RTN4-204ENST00000357732 TMED2Q15363 201 aa18.75■□□□□ 0.59
RTN4-204ENST00000357732 P3H1Q32P28 736 aa18.75■□□□□ 0.59
RTN4-204ENST00000357732 EAPPQ56P03 285 aaPredicted RBP18.75■□□□□ 0.59
RTN4-204ENST00000357732 GSTA5Q7RTV2 222 aa18.75■□□□□ 0.59
RTN4-204ENST00000357732 KIF2BQ8N4N8 673 aa18.75■□□□□ 0.59
RTN4-204ENST00000357732 MCPH1Q8NEM0 835 aa18.75■□□□□ 0.59
RTN4-204ENST00000357732 SUPT20HQ8NEM7 779 aa18.75■□□□□ 0.59
RTN4-204ENST00000357732 CPA5Q8WXQ8 436 aa18.75■□□□□ 0.59
RTN4-204ENST00000357732 C9orf72Q96LT7 481 aa18.75■□□□□ 0.59
RTN4-204ENST00000357732 LRRC37BQ96QE4 947 aa18.75■□□□□ 0.59
RTN4-204ENST00000357732 SMC6Q96SB8 1091 aa18.75■□□□□ 0.59
RTN4-204ENST00000357732 DNAJC17Q9NVM6 304 aaKnown RBP18.75■□□□□ 0.59
RTN4-204ENST00000357732 SLC5A4Q9NY91 659 aa18.75■□□□□ 0.59
RTN4-204ENST00000357732 IP6K2Q9UHH9 426 aa18.75■□□□□ 0.59
RTN4-204ENST00000357732 NFIBO00712 420 aa18.75■□□□□ 0.59
RTN4-204ENST00000357732 ATP2A1O14983 1001 aa18.75■□□□□ 0.59
RTN4-204ENST00000357732 LIASO43766 372 aa18.75■□□□□ 0.59
RTN4-204ENST00000357732 TJP3O95049 919 aa18.75■□□□□ 0.59
RTN4-204ENST00000357732 MAMLD1Q13495 774 aa18.75■□□□□ 0.59
RTN4-204ENST00000357732 PSMD6Q15008 389 aa18.75■□□□□ 0.59
RTN4-204ENST00000357732 ZACNQ401N2 412 aa18.75■□□□□ 0.59
RTN4-204ENST00000357732 TRMT1LQ7Z2T5 733 aaKnown RBP18.75■□□□□ 0.59
RTN4-204ENST00000357732 FLAD1Q8NFF5 587 aa18.75■□□□□ 0.59
RTN4-204ENST00000357732 SYTL5Q8TDW5 730 aaPredicted RBP18.75■□□□□ 0.59
RTN4-204ENST00000357732 PHTF1Q9UMS5 762 aa18.75■□□□□ 0.59
RTN4-204ENST00000357732 STK38LQ9Y2H1 464 aa18.75■□□□□ 0.59
RTN4-204ENST00000357732 HNRNPDLO14979 420 aaKnown RBP18.74■□□□□ 0.59
RTN4-204ENST00000357732 EXTL3O43909 919 aa18.74■□□□□ 0.59
RTN4-204ENST00000357732 APBA3O96018 575 aa18.74■□□□□ 0.59
RTN4-204ENST00000357732 IBSPP21815 317 aaPredicted RBP18.74■□□□□ 0.59
RTN4-204ENST00000357732 NOMO3P69849 1222 aa18.74■□□□□ 0.59
RTN4-204ENST00000357732 NFX1Q12986 1120 aaKnown RBP18.74■□□□□ 0.59
RTN4-204ENST00000357732 ABRAQ8N0Z2 381 aa18.74■□□□□ 0.59
RTN4-204ENST00000357732 ANKLE1Q8NAG6 615 aa18.74■□□□□ 0.59
RTN4-204ENST00000357732 THOC1Q96FV9 657 aaKnown RBP18.74■□□□□ 0.59
RTN4-204ENST00000357732 HEMGNQ9BXL5 484 aa18.74■□□□□ 0.59
RTN4-204ENST00000357732 TRIM6Q9C030 488 aaPredicted RBP18.74■□□□□ 0.59
RTN4-204ENST00000357732 TMEM39BQ9GZU3 492 aa18.74■□□□□ 0.59
RTN4-204ENST00000357732 PARVAQ9NVD7 372 aa18.74■□□□□ 0.59
RTN4-204ENST00000357732 SHOC2Q9UQ13 582 aa18.74■□□□□ 0.59
RTN4-204ENST00000357732 CNTN6Q9UQ52 1028 aa18.74■□□□□ 0.59
RTN4-204ENST00000357732 TRAFD1O14545 582 aaPredicted RBP18.74■□□□□ 0.59
RTN4-204ENST00000357732 EDF1O60869 148 aaKnown RBP18.74■□□□□ 0.59
RTN4-204ENST00000357732 DIAPH2O60879 1101 aa18.74■□□□□ 0.59
RTN4-204ENST00000357732 ASNSP08243 561 aa18.74■□□□□ 0.59
RTN4-204ENST00000357732 VPS41P49754 854 aa18.74■□□□□ 0.59
RTN4-204ENST00000357732 LLGL1Q15334 1064 aa18.74■□□□□ 0.59
RTN4-204ENST00000357732 DLGAP5Q15398 846 aa18.74■□□□□ 0.59
RTN4-204ENST00000357732 CMPK2Q5EBM0 449 aa18.74■□□□□ 0.59
RTN4-204ENST00000357732 MIS18BP1Q6P0N0 1132 aa18.74■□□□□ 0.59
RTN4-204ENST00000357732 VSIG1Q86XK7 387 aa18.74■□□□□ 0.59
RTN4-204ENST00000357732 TRABDQ9H4I3 376 aa18.74■□□□□ 0.59
RTN4-204ENST00000357732 WDR46O15213 610 aaKnown RBP18.73■□□□□ 0.59
RTN4-204ENST00000357732 RAD17O75943 681 aa18.73■□□□□ 0.59
RTN4-204ENST00000357732 TBXAS1P24557 533 aaPredicted RBP18.73■□□□□ 0.59
RTN4-204ENST00000357732 GCAP28676 217 aa18.73■□□□□ 0.59
RTN4-204ENST00000357732 TAS2R40P59535 323 aa18.73■□□□□ 0.59
RTN4-204ENST00000357732 PGM5Q15124 567 aa18.73■□□□□ 0.59
RTN4-204ENST00000357732 ANO5Q75V66 913 aa18.73■□□□□ 0.59
RTN4-204ENST00000357732 BZW1Q7L1Q6 419 aaKnown RBP18.73■□□□□ 0.59
RTN4-204ENST00000357732 ALLCQ8N6M5 410 aa18.73■□□□□ 0.59
RTN4-204ENST00000357732 LPAR1Q92633 364 aa18.73■□□□□ 0.59
RTN4-204ENST00000357732 PRCCQ92733 491 aaPredicted RBP18.73■□□□□ 0.59
RTN4-204ENST00000357732 SAYSD1Q9NPB0 183 aa18.73■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms