RNA–Protein interactions for RNA: ENST00000357376.7

RTN4-203, Transcript of reticulon 4, humanhuman

TSL 1 (best) BASIC

Gene RTN4, Length 4,110 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4-203ENST00000357376 PPARGC1AQ9UBK2 798 aaKnown RBP7.22□□□□□ -1.25
RTN4-203ENST00000357376 CHMP2BQ9UQN3 213 aa7.22□□□□□ -1.25
RTN4-203ENST00000357376 STXBP5LQ9Y2K9 1186 aa7.22□□□□□ -1.25
RTN4-203ENST00000357376 H0YGN5 161 aa7.22□□□□□ -1.25
RTN4-203ENST00000357376 LPXNO60711 386 aa7.22□□□□□ -1.25
RTN4-203ENST00000357376 DGAT1O75907 488 aa7.22□□□□□ -1.25
RTN4-203ENST00000357376 MAP3K6O95382 1288 aa7.22□□□□□ -1.25
RTN4-203ENST00000357376 CALB1P05937 261 aa7.22□□□□□ -1.25
RTN4-203ENST00000357376 GSTA1P08263 222 aa7.22□□□□□ -1.25
RTN4-203ENST00000357376 ARFIP2P53365 341 aa7.22□□□□□ -1.25
RTN4-203ENST00000357376 CYP24A1Q07973 514 aa7.22□□□□□ -1.25
RTN4-203ENST00000357376 ORC1Q13415 861 aa7.22□□□□□ -1.25
RTN4-203ENST00000357376 DGKZQ13574 1117 aa7.22□□□□□ -1.25
RTN4-203ENST00000357376 ATP13A4Q4VNC1 1196 aa7.22□□□□□ -1.25
RTN4-203ENST00000357376 PRAMEF18Q5VWM3 479 aa7.22□□□□□ -1.25
RTN4-203ENST00000357376 PCNX4Q63HM2 1172 aa7.22□□□□□ -1.25
RTN4-203ENST00000357376 SLFN12LQ6IEE8 588 aa7.22□□□□□ -1.25
RTN4-203ENST00000357376 CAPRIN2Q6IMN6 1127 aaKnown RBP7.22□□□□□ -1.25
RTN4-203ENST00000357376 C3orf62Q6ZUJ4 267 aa7.22□□□□□ -1.25
RTN4-203ENST00000357376 SH3BP5LQ7L8J4 393 aa7.22□□□□□ -1.25
RTN4-203ENST00000357376 ATP11CQ8NB49 1132 aa7.22□□□□□ -1.25
RTN4-203ENST00000357376 HIPK4Q8NE63 616 aa7.22□□□□□ -1.25
RTN4-203ENST00000357376 NSUN6Q8TEA1 469 aaKnown RBP7.22□□□□□ -1.25
RTN4-203ENST00000357376 AGAP11Q8TF27 550 aa7.22□□□□□ -1.25
RTN4-203ENST00000357376 CCT6BQ92526 530 aa7.22□□□□□ -1.25
RTN4-203ENST00000357376 KIAA1586Q9HCI6 787 aa7.22□□□□□ -1.25
RTN4-203ENST00000357376 STK32BQ9NY57 414 aa7.22□□□□□ -1.25
RTN4-203ENST00000357376 MARCOQ9UEW3 520 aaPredicted RBP7.22□□□□□ -1.25
RTN4-203ENST00000357376 NFS1Q9Y697 457 aa7.22□□□□□ -1.25
RTN4-203ENST00000357376 CHD4Q14839 1912 aa7.22□□□□□ -1.25
RTN4-203ENST00000357376 RPTORQ8N122 1335 aa7.22□□□□□ -1.25
RTN4-203ENST00000357376 SLIT2O94813 1529 aa7.22□□□□□ -1.25
RTN4-203ENST00000357376 IGLV3-22A0A075B6J6 115 aa7.21□□□□□ -1.25
RTN4-203ENST00000357376 NDC80O14777 642 aa7.21□□□□□ -1.25
RTN4-203ENST00000357376 EDIL3O43854 480 aa7.21□□□□□ -1.25
RTN4-203ENST00000357376 TOM1L1O75674 476 aa7.21□□□□□ -1.25
RTN4-203ENST00000357376 DNAJC8O75937 253 aaPredicted RBP7.21□□□□□ -1.25
RTN4-203ENST00000357376 PROSCO94903 275 aa7.21□□□□□ -1.25
RTN4-203ENST00000357376 ICAM1P05362 532 aa7.21□□□□□ -1.25
RTN4-203ENST00000357376 ETS1P14921 441 aa7.21□□□□□ -1.25
RTN4-203ENST00000357376 CCND1P24385 295 aa7.21□□□□□ -1.25
RTN4-203ENST00000357376 ECHS1P30084 290 aa7.21□□□□□ -1.25
RTN4-203ENST00000357376 CPA2P48052 419 aa7.21□□□□□ -1.25
RTN4-203ENST00000357376 YARSP54577 528 aaKnown RBP7.21□□□□□ -1.25
RTN4-203ENST00000357376 YWHAEP62258 255 aaKnown RBP7.21□□□□□ -1.25
RTN4-203ENST00000357376 APBB1IPQ7Z5R6 666 aaPredicted RBP7.21□□□□□ -1.25
RTN4-203ENST00000357376 FAM71AQ8IYT1 594 aa7.21□□□□□ -1.25
RTN4-203ENST00000357376 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP7.21□□□□□ -1.25
RTN4-203ENST00000357376 ATG4CQ96DT6 458 aa7.21□□□□□ -1.25
RTN4-203ENST00000357376 ANKRD36BP1Q96IX9 119 aa7.21□□□□□ -1.25
RTN4-203ENST00000357376 AGO4Q9HCK5 861 aaKnown RBP7.21□□□□□ -1.25
RTN4-203ENST00000357376 SEPT10Q9P0V9 454 aa7.21□□□□□ -1.25
RTN4-203ENST00000357376 GGA2Q9UJY4 613 aa7.21□□□□□ -1.25
RTN4-203ENST00000357376 TAF1P21675 1872 aa7.21□□□□□ -1.26
RTN4-203ENST00000357376 IQANK1A0A1B0GTG1 560 aa7.21□□□□□ -1.26
RTN4-203ENST00000357376 SRRM3A6NNA2 597 aaPredicted RBP7.21□□□□□ -1.26
RTN4-203ENST00000357376 ENO4A6NNW6 628 aa7.21□□□□□ -1.26
RTN4-203ENST00000357376 COPEO14579 308 aa7.21□□□□□ -1.26
RTN4-203ENST00000357376 CST8O60676 142 aa7.21□□□□□ -1.26
RTN4-203ENST00000357376 TBXAS1P24557 533 aaPredicted RBP7.21□□□□□ -1.26
RTN4-203ENST00000357376 HMGCS2P54868 508 aa7.21□□□□□ -1.26
RTN4-203ENST00000357376 CENPCQ03188 943 aa7.21□□□□□ -1.26
RTN4-203ENST00000357376 UGCGQ16739 394 aa7.21□□□□□ -1.26
RTN4-203ENST00000357376 ACCSLQ4AC99 568 aa7.21□□□□□ -1.26
RTN4-203ENST00000357376 PREPLQ4J6C6 727 aaPredicted RBP7.21□□□□□ -1.26
RTN4-203ENST00000357376 C1orf228Q6PIY5 440 aa7.21□□□□□ -1.26
RTN4-203ENST00000357376 ZDHHC24Q6UX98 284 aa7.21□□□□□ -1.26
RTN4-203ENST00000357376 TRIM72Q6ZMU5 477 aa7.21□□□□□ -1.26
RTN4-203ENST00000357376 FEZF2Q8TBJ5 459 aa7.21□□□□□ -1.26
RTN4-203ENST00000357376 ART4Q93070 314 aa7.21□□□□□ -1.26
RTN4-203ENST00000357376 CENPTQ96BT3 561 aa7.21□□□□□ -1.26
RTN4-203ENST00000357376 TLCD1Q96CP7 247 aa7.21□□□□□ -1.26
RTN4-203ENST00000357376 CDHR1Q96JP9 859 aa7.21□□□□□ -1.26
RTN4-203ENST00000357376 HEXIM2Q96MH2 286 aaKnown RBP7.21□□□□□ -1.26
RTN4-203ENST00000357376 MOV10L1Q9BXT6 1211 aaKnown RBP7.21□□□□□ -1.26
RTN4-203ENST00000357376 LRRC4CQ9HCJ2 640 aa7.21□□□□□ -1.26
RTN4-203ENST00000357376 ZNF302Q9NR11 478 aa7.21□□□□□ -1.26
RTN4-203ENST00000357376 GRHL1Q9NZI5 618 aa7.21□□□□□ -1.26
RTN4-203ENST00000357376 PSMC3IPQ9P2W1 217 aaPredicted RBP7.21□□□□□ -1.26
RTN4-203ENST00000357376 R3HDM2Q9Y2K5 976 aaKnown RBP7.21□□□□□ -1.26
RTN4-203ENST00000357376 PLIN4Q96Q06 1357 aa7.21□□□□□ -1.26
RTN4-203ENST00000357376 A8MUI8 341 aa7.21□□□□□ -1.26
RTN4-203ENST00000357376 LDHAP00338 332 aaKnown RBP7.21□□□□□ -1.26
RTN4-203ENST00000357376 KRT3P12035 628 aa7.21□□□□□ -1.26
RTN4-203ENST00000357376 PECAM1P16284 738 aaPredicted RBP7.21□□□□□ -1.26
RTN4-203ENST00000357376 DRG2P55039 364 aaKnown RBP7.21□□□□□ -1.26
RTN4-203ENST00000357376 SARNPP82979 210 aaKnown RBP7.21□□□□□ -1.26
RTN4-203ENST00000357376 CUL2Q13617 745 aa7.21□□□□□ -1.26
RTN4-203ENST00000357376 EMC2Q15006 297 aa7.21□□□□□ -1.26
RTN4-203ENST00000357376 PKN2Q16513 984 aaKnown RBP7.21□□□□□ -1.26
RTN4-203ENST00000357376 GPAT2Q6NUI2 795 aa7.21□□□□□ -1.26
RTN4-203ENST00000357376 RCOR2Q8IZ40 523 aa7.21□□□□□ -1.26
RTN4-203ENST00000357376 SYTL5Q8TDW5 730 aaPredicted RBP7.21□□□□□ -1.26
RTN4-203ENST00000357376 SHC3Q92529 594 aa7.21□□□□□ -1.26
RTN4-203ENST00000357376 MAGEB18Q96M61 343 aa7.21□□□□□ -1.26
RTN4-203ENST00000357376 KIF9Q9HAQ2 790 aa7.21□□□□□ -1.26
RTN4-203ENST00000357376 AS3MTQ9HBK9 375 aa7.21□□□□□ -1.26
RTN4-203ENST00000357376 RXFP1Q9HBX9 757 aa7.21□□□□□ -1.26
RTN4-203ENST00000357376 SLCO1B3Q9NPD5 702 aa7.21□□□□□ -1.26
RTN4-203ENST00000357376 ZDHHC18Q9NUE0 388 aa7.21□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms