RNA–Protein interactions for RNA: ENST00000355572.6

PDLIM7-201, Transcript of PDZ and LIM domain 7, humanhuman

TSL 1 (best) BASIC

Gene PDLIM7, Length 977 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-201ENST00000355572 TCEAL4Q96EI5 215 aa18.16■□□□□ 0.5
PDLIM7-201ENST00000355572 ZNF396Q96N95 335 aaPredicted RBP18.16■□□□□ 0.5
PDLIM7-201ENST00000355572 CBWD1Q9BRT8 395 aa18.16■□□□□ 0.5
PDLIM7-201ENST00000355572 OLFML3Q9NRN5 406 aa18.16■□□□□ 0.5
PDLIM7-201ENST00000355572 KBTBD4Q9NVX7 518 aa18.16■□□□□ 0.5
PDLIM7-201ENST00000355572 SEL1LQ9UBV2 794 aa18.16■□□□□ 0.5
PDLIM7-201ENST00000355572 PCDHA7Q9UN72 937 aa18.16■□□□□ 0.5
PDLIM7-201ENST00000355572 CUTAO60888 179 aa18.15■□□□□ 0.5
PDLIM7-201ENST00000355572 ATF2P15336 505 aa18.15■□□□□ 0.5
PDLIM7-201ENST00000355572 GAP43P17677 238 aa18.15■□□□□ 0.5
PDLIM7-201ENST00000355572 LILRA4P59901 499 aa18.15■□□□□ 0.5
PDLIM7-201ENST00000355572 UVSSAQ2YD98 709 aa18.15■□□□□ 0.5
PDLIM7-201ENST00000355572 SUGP1Q8IWZ8 645 aaKnown RBP18.15■□□□□ 0.5
PDLIM7-201ENST00000355572 HS6ST3Q8IZP7 471 aa18.15■□□□□ 0.5
PDLIM7-201ENST00000355572 POMGNT1Q8WZA1 660 aa18.15■□□□□ 0.5
PDLIM7-201ENST00000355572 HVCN1Q96D96 273 aa18.15■□□□□ 0.5
PDLIM7-201ENST00000355572 BORCS6Q96GS4 357 aa18.15■□□□□ 0.5
PDLIM7-201ENST00000355572 RTP3Q9BQQ7 232 aa18.15■□□□□ 0.5
PDLIM7-201ENST00000355572 TRIM9Q9C026 710 aa18.15■□□□□ 0.5
PDLIM7-201ENST00000355572 PCIF1Q9H4Z3 704 aa18.15■□□□□ 0.5
PDLIM7-201ENST00000355572 CYP4F11Q9HBI6 524 aa18.15■□□□□ 0.5
PDLIM7-201ENST00000355572 CEP72Q9P209 647 aa18.15■□□□□ 0.5
PDLIM7-201ENST00000355572 IGSF9Q9P2J2 1179 aa18.15■□□□□ 0.5
PDLIM7-201ENST00000355572 INSL5Q9Y5Q6 135 aa18.15■□□□□ 0.5
PDLIM7-201ENST00000355572 MIA3Q5JRA6 1907 aa18.14■□□□□ 0.49
PDLIM7-201ENST00000355572 H7C4K7 107 aa18.14■□□□□ 0.49
PDLIM7-201ENST00000355572 MOSPD3O75425 235 aa18.14■□□□□ 0.49
PDLIM7-201ENST00000355572 OAZ2O95190 189 aa18.14■□□□□ 0.49
PDLIM7-201ENST00000355572 RHOP08100 348 aa18.14■□□□□ 0.49
PDLIM7-201ENST00000355572 POU2F2P09086 479 aa18.14■□□□□ 0.49
PDLIM7-201ENST00000355572 CEBPBP17676 345 aa18.14■□□□□ 0.49
PDLIM7-201ENST00000355572 HOXD11P31277 338 aaPredicted RBP18.14■□□□□ 0.49
PDLIM7-201ENST00000355572 ADCY1Q08828 1119 aa18.14■□□□□ 0.49
PDLIM7-201ENST00000355572 TMEM132DQ14C87 1099 aa18.14■□□□□ 0.49
PDLIM7-201ENST00000355572 PRSS36Q5K4E3 855 aa18.14■□□□□ 0.49
PDLIM7-201ENST00000355572 ZNF280DQ6N043 979 aa18.14■□□□□ 0.49
PDLIM7-201ENST00000355572 TCEAL8Q8IYN2 117 aa18.14■□□□□ 0.49
PDLIM7-201ENST00000355572 GRAMD1CQ8IYS0 662 aa18.14■□□□□ 0.49
PDLIM7-201ENST00000355572 OR10T2Q8NGX3 314 aa18.14■□□□□ 0.49
PDLIM7-201ENST00000355572 CXorf38Q8TB03 319 aa18.14■□□□□ 0.49
PDLIM7-201ENST00000355572 SENP8Q96LD8 212 aa18.14■□□□□ 0.49
PDLIM7-201ENST00000355572 PGLYRP2Q96PD5 576 aa18.14■□□□□ 0.49
PDLIM7-201ENST00000355572 FAM213AQ9BRX8 229 aa18.14■□□□□ 0.49
PDLIM7-201ENST00000355572 PLA2G2FQ9BZM2 168 aa18.14■□□□□ 0.49
PDLIM7-201ENST00000355572 FAM86C1Q9NVL1 165 aa18.14■□□□□ 0.49
PDLIM7-201ENST00000355572 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP18.14■□□□□ 0.49
PDLIM7-201ENST00000355572 CDH7Q9ULB5 785 aa18.14■□□□□ 0.49
PDLIM7-201ENST00000355572 NCANO14594 1321 aa18.14■□□□□ 0.49
PDLIM7-201ENST00000355572 PTPRJQ12913 1337 aa18.14■□□□□ 0.49
PDLIM7-201ENST00000355572 TICRRQ7Z2Z1 1910 aa18.13■□□□□ 0.49
PDLIM7-201ENST00000355572 SCP2P22307 547 aa18.13■□□□□ 0.49
PDLIM7-201ENST00000355572 KYAT1Q16773 422 aa18.13■□□□□ 0.49
PDLIM7-201ENST00000355572 PABPC1LQ4VXU2 614 aaKnown RBP18.13■□□□□ 0.49
PDLIM7-201ENST00000355572 SIX5Q8N196 739 aa18.13■□□□□ 0.49
PDLIM7-201ENST00000355572 BEST2Q8NFU1 509 aa18.13■□□□□ 0.49
PDLIM7-201ENST00000355572 GPR152Q8TDT2 470 aa18.13■□□□□ 0.49
PDLIM7-201ENST00000355572 ACCSQ96QU6 501 aa18.13■□□□□ 0.49
PDLIM7-201ENST00000355572 KXD1Q9BQD3 176 aa18.13■□□□□ 0.49
PDLIM7-201ENST00000355572 DNAJC25Q9H1X3 360 aa18.13■□□□□ 0.49
PDLIM7-201ENST00000355572 BLZF1Q9H2G9 400 aa18.13■□□□□ 0.49
PDLIM7-201ENST00000355572 CA14Q9ULX7 337 aa18.13■□□□□ 0.49
PDLIM7-201ENST00000355572 KIF26AQ9ULI4 1882 aaPredicted RBP18.12■□□□□ 0.49
PDLIM7-201ENST00000355572 XYLBO75191 536 aa18.12■□□□□ 0.49
PDLIM7-201ENST00000355572 SOAT2O75908 522 aa18.12■□□□□ 0.49
PDLIM7-201ENST00000355572 CPB1P15086 417 aa18.12■□□□□ 0.49
PDLIM7-201ENST00000355572 GJA1P17302 382 aa18.12■□□□□ 0.49
PDLIM7-201ENST00000355572 YWHAHQ04917 246 aaPredicted RBP18.12■□□□□ 0.49
PDLIM7-201ENST00000355572 EHHADHQ08426 723 aa18.12■□□□□ 0.49
PDLIM7-201ENST00000355572 SLFN12LQ6IEE8 588 aa18.12■□□□□ 0.49
PDLIM7-201ENST00000355572 DSTYKQ6XUX3 929 aa18.12■□□□□ 0.49
PDLIM7-201ENST00000355572 BRSK2Q8IWQ3 736 aa18.12■□□□□ 0.49
PDLIM7-201ENST00000355572 CD302Q8IX05 232 aa18.12■□□□□ 0.49
PDLIM7-201ENST00000355572 APPL2Q8NEU8 664 aa18.12■□□□□ 0.49
PDLIM7-201ENST00000355572 FLCNQ8NFG4 579 aa18.12■□□□□ 0.49
PDLIM7-201ENST00000355572 MCRS1Q96EZ8 462 aa18.12■□□□□ 0.49
PDLIM7-201ENST00000355572 CORO1BQ9BR76 489 aa18.12■□□□□ 0.49
PDLIM7-201ENST00000355572 TNMDQ9H2S6 317 aa18.12■□□□□ 0.49
PDLIM7-201ENST00000355572 ASB7Q9H672 318 aa18.12■□□□□ 0.49
PDLIM7-201ENST00000355572 DPP3Q9NY33 737 aa18.12■□□□□ 0.49
PDLIM7-201ENST00000355572 AFF4Q9UHB7 1163 aaKnown RBP18.12■□□□□ 0.49
PDLIM7-201ENST00000355572 DERAQ9Y315 318 aa18.12■□□□□ 0.49
PDLIM7-201ENST00000355572 PATJQ8NI35 1801 aa18.12■□□□□ 0.49
PDLIM7-201ENST00000355572 NUP210Q8TEM1 1887 aaPredicted RBP18.12■□□□□ 0.49
PDLIM7-201ENST00000355572 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP18.11■□□□□ 0.49
PDLIM7-201ENST00000355572 MTMR11A4FU01 709 aa18.11■□□□□ 0.49
PDLIM7-201ENST00000355572 PRRG1O14668 218 aa18.11■□□□□ 0.49
PDLIM7-201ENST00000355572 POLR2DO15514 142 aaKnown RBP18.11■□□□□ 0.49
PDLIM7-201ENST00000355572 FCARP24071 287 aa18.11■□□□□ 0.49
PDLIM7-201ENST00000355572 TWF1Q12792 350 aa18.11■□□□□ 0.49
PDLIM7-201ENST00000355572 RESP18Q5W5W9 173 aa18.11■□□□□ 0.49
PDLIM7-201ENST00000355572 TPGS2Q68CL5 300 aa18.11■□□□□ 0.49
PDLIM7-201ENST00000355572 LMBRD2Q68DH5 695 aaPredicted RBP18.11■□□□□ 0.49
PDLIM7-201ENST00000355572 EPM2AIP1Q7L775 607 aaPredicted RBP18.11■□□□□ 0.49
PDLIM7-201ENST00000355572 ALYREFQ86V81 257 aaKnown RBP18.11■□□□□ 0.49
PDLIM7-201ENST00000355572 LRRC3Q9BY71 257 aa18.11■□□□□ 0.49
PDLIM7-201ENST00000355572 SLC27A5Q9Y2P5 690 aa18.11■□□□□ 0.49
PDLIM7-201ENST00000355572 C2CD2Q9Y426 696 aa18.11■□□□□ 0.49
PDLIM7-201ENST00000355572 YIPF1Q9Y548 306 aa18.11■□□□□ 0.49
PDLIM7-201ENST00000355572 PTPRDP23468 1912 aa18.1■□□□□ 0.49
PDLIM7-201ENST00000355572 GREB1Q4ZG55 1949 aa18.1■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms