RNA–Protein interactions for RNA: ENST00000355133.7

SCN8A-202, Transcript of sodium voltage-gated channel alpha subunit 8, humanhuman

TSL 1 (best) BASIC

Gene SCN8A, Length 5,820 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN8A-202ENST00000355133 GPAT2Q6NUI2 795 aa13.86□□□□□ -0.19
SCN8A-202ENST00000355133 NDE1Q9NXR1 346 aa13.86□□□□□ -0.19
SCN8A-202ENST00000355133 ERAP1Q9NZ08 941 aa13.86□□□□□ -0.19
SCN8A-202ENST00000355133 SMARCAL1Q9NZC9 954 aa13.86□□□□□ -0.19
SCN8A-202ENST00000355133 GTF2H1P32780 548 aa13.86□□□□□ -0.19
SCN8A-202ENST00000355133 VSNL1P62760 191 aa13.86□□□□□ -0.19
SCN8A-202ENST00000355133 ITPK1Q13572 414 aa13.86□□□□□ -0.19
SCN8A-202ENST00000355133 C9orf72Q96LT7 481 aa13.86□□□□□ -0.19
SCN8A-202ENST00000355133 ANGPT2O15123 496 aa13.86□□□□□ -0.19
SCN8A-202ENST00000355133 PSMD3O43242 534 aa13.86□□□□□ -0.19
SCN8A-202ENST00000355133 ARHGEF7Q14155 803 aa13.86□□□□□ -0.19
SCN8A-202ENST00000355133 SYDE1Q6ZW31 735 aaPredicted RBP13.86□□□□□ -0.19
SCN8A-202ENST00000355133 DCP1BQ8IZD4 617 aaKnown RBP13.86□□□□□ -0.19
SCN8A-202ENST00000355133 NUP93Q8N1F7 819 aa13.86□□□□□ -0.19
SCN8A-202ENST00000355133 FOPNLQ96NB1 174 aa13.86□□□□□ -0.19
SCN8A-202ENST00000355133 TSSK1BQ9BXA7 367 aa13.86□□□□□ -0.19
SCN8A-202ENST00000355133 WWP1Q9H0M0 922 aa13.86□□□□□ -0.19
SCN8A-202ENST00000355133 NEU2Q9Y3R4 380 aa13.86□□□□□ -0.19
SCN8A-202ENST00000355133 CETPP11597 493 aa13.86□□□□□ -0.19
SCN8A-202ENST00000355133 PPP3CCP48454 512 aa13.86□□□□□ -0.19
SCN8A-202ENST00000355133 CYP4A22Q5TCH4 519 aa13.86□□□□□ -0.19
SCN8A-202ENST00000355133 STKLD1Q8NE28 680 aa13.86□□□□□ -0.19
SCN8A-202ENST00000355133 PCMTD2Q9NV79 361 aa13.86□□□□□ -0.19
SCN8A-202ENST00000355133 CHORDC1Q9UHD1 332 aaPredicted RBP13.86□□□□□ -0.19
SCN8A-202ENST00000355133 DBR1Q9UK59 544 aaKnown RBP13.86□□□□□ -0.19
SCN8A-202ENST00000355133 SPATA31A1Q5TZJ5 1347 aa13.86□□□□□ -0.19
SCN8A-202ENST00000355133 EXTL3O43909 919 aa13.86□□□□□ -0.19
SCN8A-202ENST00000355133 BRD2P25440 801 aaKnown RBP13.86□□□□□ -0.19
SCN8A-202ENST00000355133 KRT72Q14CN4 511 aa13.86□□□□□ -0.19
SCN8A-202ENST00000355133 PKN3Q6P5Z2 889 aa13.86□□□□□ -0.19
SCN8A-202ENST00000355133 C4orf33Q8N1A6 199 aa13.86□□□□□ -0.19
SCN8A-202ENST00000355133 CHMP2BQ9UQN3 213 aa13.86□□□□□ -0.19
SCN8A-202ENST00000355133 C2CD2LO14523 706 aa13.85□□□□□ -0.19
SCN8A-202ENST00000355133 ZNF189O75820 626 aaPredicted RBP13.85□□□□□ -0.19
SCN8A-202ENST00000355133 ICA1LQ8NDH6 482 aa13.85□□□□□ -0.19
SCN8A-202ENST00000355133 IPMKQ8NFU5 416 aa13.85□□□□□ -0.19
SCN8A-202ENST00000355133 TASP1Q9H6P5 420 aa13.85□□□□□ -0.19
SCN8A-202ENST00000355133 METTL5Q9NRN9 209 aaKnown RBP13.85□□□□□ -0.19
SCN8A-202ENST00000355133 C20orf96Q9NUD7 363 aaPredicted RBP13.85□□□□□ -0.19
SCN8A-202ENST00000355133 MARCOQ9UEW3 520 aaPredicted RBP13.85□□□□□ -0.19
SCN8A-202ENST00000355133 TCF7P36402 384 aaPredicted RBP13.85□□□□□ -0.19
SCN8A-202ENST00000355133 OR9Q1Q8NGQ5 310 aa13.85□□□□□ -0.19
SCN8A-202ENST00000355133 COG1Q8WTW3 980 aa13.85□□□□□ -0.19
SCN8A-202ENST00000355133 FAM167BQ9BTA0 163 aa13.85□□□□□ -0.19
SCN8A-202ENST00000355133 TMEM8AQ9HCN3 771 aa13.85□□□□□ -0.19
SCN8A-202ENST00000355133 NAGPAQ9UK23 515 aa13.85□□□□□ -0.19
SCN8A-202ENST00000355133 PKP3Q9Y446 797 aa13.85□□□□□ -0.19
SCN8A-202ENST00000355133 HBP1O60381 514 aa13.85□□□□□ -0.19
SCN8A-202ENST00000355133 IL10P22301 178 aa13.85□□□□□ -0.19
SCN8A-202ENST00000355133 FXR1P51114 621 aaKnown RBP eCLIP13.85□□□□□ -0.19
SCN8A-202ENST00000355133 ACTN3Q08043 901 aaPredicted RBP13.85□□□□□ -0.19
SCN8A-202ENST00000355133 GJB7Q6PEY0 223 aa13.85□□□□□ -0.19
SCN8A-202ENST00000355133 FBXO33Q7Z6M2 555 aa13.85□□□□□ -0.19
SCN8A-202ENST00000355133 CHST13Q8NET6 341 aa13.85□□□□□ -0.19
SCN8A-202ENST00000355133 KLK14Q9P0G3 267 aa13.85□□□□□ -0.19
SCN8A-202ENST00000355133 DOLKQ9UPQ8 538 aa13.85□□□□□ -0.19
SCN8A-202ENST00000355133 PCDHB7Q9Y5E2 793 aa13.85□□□□□ -0.19
SCN8A-202ENST00000355133 CNTNAP5Q8WYK1 1306 aa13.85□□□□□ -0.19
SCN8A-202ENST00000355133 TARSL2A2RTX5 802 aaKnown RBP13.85□□□□□ -0.19
SCN8A-202ENST00000355133 AP3B1O00203 1094 aa13.85□□□□□ -0.19
SCN8A-202ENST00000355133 SEC24DO94855 1032 aaPredicted RBP13.85□□□□□ -0.19
SCN8A-202ENST00000355133 SOX11P35716 441 aa13.85□□□□□ -0.19
SCN8A-202ENST00000355133 C16orf87Q6PH81 154 aa13.85□□□□□ -0.19
SCN8A-202ENST00000355133 ANO5Q75V66 913 aa13.85□□□□□ -0.19
SCN8A-202ENST00000355133 PATL1Q86TB9 770 aaKnown RBP13.85□□□□□ -0.19
SCN8A-202ENST00000355133 TBC1D19Q8N5T2 526 aa13.85□□□□□ -0.19
SCN8A-202ENST00000355133 ZKSCAN4Q969J2 545 aaPredicted RBP13.85□□□□□ -0.19
SCN8A-202ENST00000355133 TARS2Q9BW92 718 aaKnown RBP13.85□□□□□ -0.19
SCN8A-202ENST00000355133 PRMT7Q9NVM4 692 aaPredicted RBP13.85□□□□□ -0.19
SCN8A-202ENST00000355133 USP31Q70CQ4 1352 aa13.85□□□□□ -0.19
SCN8A-202ENST00000355133 KRT4P19013 534 aa13.84□□□□□ -0.19
SCN8A-202ENST00000355133 ARL4DP49703 201 aa13.84□□□□□ -0.19
SCN8A-202ENST00000355133 BLVRAP53004 296 aa13.84□□□□□ -0.19
SCN8A-202ENST00000355133 BYSLQ13895 437 aaKnown RBP13.84□□□□□ -0.19
SCN8A-202ENST00000355133 AMHR2Q16671 573 aa13.84□□□□□ -0.19
SCN8A-202ENST00000355133 C6orf10Q5SRN2 563 aa13.84□□□□□ -0.19
SCN8A-202ENST00000355133 SCFD2Q8WU76 684 aa13.84□□□□□ -0.19
SCN8A-202ENST00000355133 NUDT12Q9BQG2 462 aa13.84□□□□□ -0.19
SCN8A-202ENST00000355133 CD274Q9NZQ7 290 aa13.84□□□□□ -0.19
SCN8A-202ENST00000355133 PRG3Q9Y2Y8 225 aaPredicted RBP13.84□□□□□ -0.19
SCN8A-202ENST00000355133 SUPT3HB4E1H0 165 aa13.84□□□□□ -0.19
SCN8A-202ENST00000355133 GRIN3BO60391 1043 aa13.84□□□□□ -0.19
SCN8A-202ENST00000355133 SUPT3HO75486 399 aa13.84□□□□□ -0.19
SCN8A-202ENST00000355133 NCAM1P13591 858 aa13.84□□□□□ -0.19
SCN8A-202ENST00000355133 GPD1P21695 349 aa13.84□□□□□ -0.19
SCN8A-202ENST00000355133 COMTP21964 271 aa13.84□□□□□ -0.19
SCN8A-202ENST00000355133 PCSK1P29120 753 aa13.84□□□□□ -0.19
SCN8A-202ENST00000355133 SEZ6Q53EL9 994 aa13.84□□□□□ -0.19
SCN8A-202ENST00000355133 C10orf120Q5SQS8 335 aa13.84□□□□□ -0.19
SCN8A-202ENST00000355133 SPATA21Q7Z572 469 aa13.84□□□□□ -0.19
SCN8A-202ENST00000355133 SNX31Q8N9S9 440 aa13.84□□□□□ -0.19
SCN8A-202ENST00000355133 HPDLQ96IR7 371 aa13.84□□□□□ -0.19
SCN8A-202ENST00000355133 ZNF512BQ96KM6 892 aaPredicted RBP13.84□□□□□ -0.19
SCN8A-202ENST00000355133 USP42Q9H9J4 1324 aaKnown RBP13.84□□□□□ -0.19
SCN8A-202ENST00000355133 IGSF9BQ9UPX0 1349 aa13.84□□□□□ -0.19
SCN8A-202ENST00000355133 ZNF263O14978 683 aa13.84□□□□□ -0.19
SCN8A-202ENST00000355133 RAD23BP54727 409 aa13.84□□□□□ -0.19
SCN8A-202ENST00000355133 LRRC74AQ0VAA2 488 aa13.84□□□□□ -0.19
SCN8A-202ENST00000355133 NAB2Q15742 525 aa13.84□□□□□ -0.19
SCN8A-202ENST00000355133 BHMTQ93088 406 aa13.84□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms