RNA–Protein interactions for RNA: ENST00000354880.9

CTSA-202, Transcript of cathepsin A, humanhuman

TSL 2 BASIC

Gene CTSA, Length 1,820 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSA-202ENST00000354880 TMEM270Q6UE05 265 aa16.71■□□□□ 0.27
CTSA-202ENST00000354880 FAM43BQ6ZT52 329 aaPredicted RBP16.71■□□□□ 0.27
CTSA-202ENST00000354880 NECAB2Q7Z6G3 386 aa16.71■□□□□ 0.27
CTSA-202ENST00000354880 ZNF598Q86UK7 904 aaKnown RBP16.71■□□□□ 0.27
CTSA-202ENST00000354880 UBR7Q8N806 425 aa16.71■□□□□ 0.27
CTSA-202ENST00000354880 DBF4BQ8NFT6 615 aa16.71■□□□□ 0.27
CTSA-202ENST00000354880 LINC01599Q8WXQ3 324 aa16.71■□□□□ 0.27
CTSA-202ENST00000354880 AGPAT1Q99943 283 aa16.71■□□□□ 0.27
CTSA-202ENST00000354880 BCO2Q9BYV7 579 aa16.71■□□□□ 0.27
CTSA-202ENST00000354880 PPP1R12CQ9BZL4 782 aa16.71■□□□□ 0.27
CTSA-202ENST00000354880 TSPYL2Q9H2G4 693 aaPredicted RBP16.71■□□□□ 0.27
CTSA-202ENST00000354880 PRDM10Q9NQV6 1147 aa16.71■□□□□ 0.27
CTSA-202ENST00000354880 SLC38A7Q9NVC3 462 aa16.71■□□□□ 0.27
CTSA-202ENST00000354880 POLIQ9UNA4 740 aa16.71■□□□□ 0.27
CTSA-202ENST00000354880 CNTN6Q9UQ52 1028 aa16.71■□□□□ 0.27
CTSA-202ENST00000354880 EOMESO95936 686 aa16.7■□□□□ 0.26
CTSA-202ENST00000354880 THP07101 528 aa16.7■□□□□ 0.26
CTSA-202ENST00000354880 WEE2P0C1S8 567 aa16.7■□□□□ 0.26
CTSA-202ENST00000354880 CYP11B1P15538 503 aa16.7■□□□□ 0.26
CTSA-202ENST00000354880 PDE6CP51160 858 aa16.7■□□□□ 0.26
CTSA-202ENST00000354880 CCL23P55773 120 aa16.7■□□□□ 0.26
CTSA-202ENST00000354880 BPIFB4P59827 614 aa16.7■□□□□ 0.26
CTSA-202ENST00000354880 YWHAEP62258 255 aaKnown RBP16.7■□□□□ 0.26
CTSA-202ENST00000354880 SOX4Q06945 474 aaPredicted RBP16.7■□□□□ 0.26
CTSA-202ENST00000354880 SMYD5Q6GMV2 418 aa16.7■□□□□ 0.26
CTSA-202ENST00000354880 KIAA1328Q86T90 577 aa16.7■□□□□ 0.26
CTSA-202ENST00000354880 TET1Q8NFU7 2136 aa16.7■□□□□ 0.26
CTSA-202ENST00000354880 SCLYQ96I15 445 aa16.7■□□□□ 0.26
CTSA-202ENST00000354880 C16orf45Q96MC5 204 aaPredicted RBP16.7■□□□□ 0.26
CTSA-202ENST00000354880 WNT8AQ9H1J5 351 aa16.7■□□□□ 0.26
CTSA-202ENST00000354880 ACP6Q9NPH0 428 aa16.7■□□□□ 0.26
CTSA-202ENST00000354880 LZTFL1Q9NQ48 299 aa16.7■□□□□ 0.26
CTSA-202ENST00000354880 CISHQ9NSE2 258 aa16.7■□□□□ 0.26
CTSA-202ENST00000354880 NOCTQ9UK39 431 aaKnown RBP16.7■□□□□ 0.26
CTSA-202ENST00000354880 TBX21Q9UL17 535 aa16.7■□□□□ 0.26
CTSA-202ENST00000354880 PCDHA13Q9Y5I0 950 aa16.7■□□□□ 0.26
CTSA-202ENST00000354880 A0A0U1RQJ8 604 aa16.7■□□□□ 0.26
CTSA-202ENST00000354880 DDX3XO00571 662 aaKnown RBP eCLIP16.7■□□□□ 0.262e-7■■■■■ 33.6
CTSA-202ENST00000354880 PIRO00625 290 aa16.7■□□□□ 0.26
CTSA-202ENST00000354880 PPEF2O14830 753 aa16.7■□□□□ 0.26
CTSA-202ENST00000354880 CD58P19256 250 aa16.7■□□□□ 0.26
CTSA-202ENST00000354880 TNFAIP3P21580 790 aa16.7■□□□□ 0.26
CTSA-202ENST00000354880 MAGEA1P43355 309 aa16.7■□□□□ 0.26
CTSA-202ENST00000354880 SCNN1GP51170 649 aa16.7■□□□□ 0.26
CTSA-202ENST00000354880 AFF1P51825 1210 aaKnown RBP16.7■□□□□ 0.26
CTSA-202ENST00000354880 VAV2P52735 878 aa16.7■□□□□ 0.26
CTSA-202ENST00000354880 TNNC1P63316 161 aa16.7■□□□□ 0.26
CTSA-202ENST00000354880 FAM189BP81408 668 aa16.7■□□□□ 0.26
CTSA-202ENST00000354880 PTPN14Q15678 1187 aa16.7■□□□□ 0.26
CTSA-202ENST00000354880 LRRC26Q2I0M4 334 aa16.7■□□□□ 0.26
CTSA-202ENST00000354880 ARHGAP29Q52LW3 1261 aa16.7■□□□□ 0.26
CTSA-202ENST00000354880 NYAP1Q6ZVC0 841 aa16.7■□□□□ 0.26
CTSA-202ENST00000354880 NOP9Q86U38 636 aaKnown RBP16.7■□□□□ 0.26
CTSA-202ENST00000354880 GLYCTKQ8IVS8 523 aa16.7■□□□□ 0.26
CTSA-202ENST00000354880 OLIG1Q8TAK6 271 aa16.7■□□□□ 0.26
CTSA-202ENST00000354880 SLC20A1Q8WUM9 679 aa16.7■□□□□ 0.26
CTSA-202ENST00000354880 ATRIPQ8WXE1 791 aa16.7■□□□□ 0.26
CTSA-202ENST00000354880 SEPT8Q92599 483 aa16.7■□□□□ 0.26
CTSA-202ENST00000354880 APBB2Q92870 758 aa16.7■□□□□ 0.26
CTSA-202ENST00000354880 MCOLN1Q9GZU1 580 aa16.7■□□□□ 0.26
CTSA-202ENST00000354880 GOLGA2P5Q9HBQ8 144 aa16.7■□□□□ 0.26
CTSA-202ENST00000354880 LUC7LQ9NQ29 371 aaKnown RBP16.7■□□□□ 0.26
CTSA-202ENST00000354880 TMEM39AQ9NV64 488 aa16.7■□□□□ 0.26
CTSA-202ENST00000354880 MIOSQ9NXC5 875 aa16.7■□□□□ 0.26
CTSA-202ENST00000354880 NAGPAQ9UK23 515 aa16.7■□□□□ 0.26
CTSA-202ENST00000354880 GTF3C5Q9Y5Q8 519 aaPredicted RBP16.7■□□□□ 0.26
CTSA-202ENST00000354880 CLTBP09497 229 aa16.69■□□□□ 0.26
CTSA-202ENST00000354880 LRPAP1P30533 357 aa16.69■□□□□ 0.26
CTSA-202ENST00000354880 CYP2C18P33260 490 aa16.69■□□□□ 0.26
CTSA-202ENST00000354880 PNPLA4P41247 253 aa16.69■□□□□ 0.26
CTSA-202ENST00000354880 ALKBH5Q6P6C2 394 aaKnown RBP16.69■□□□□ 0.26
CTSA-202ENST00000354880 RBBP8NLQ8NC74 664 aaPredicted RBP16.69■□□□□ 0.26
CTSA-202ENST00000354880 SLC30A5Q8TAD4 765 aa16.69■□□□□ 0.26
CTSA-202ENST00000354880 LNX1Q8TBB1 728 aaPredicted RBP16.69■□□□□ 0.26
CTSA-202ENST00000354880 ZNF560Q96MR9 790 aa16.69■□□□□ 0.26
CTSA-202ENST00000354880 CYP3A43Q9HB55 503 aa16.69■□□□□ 0.26
CTSA-202ENST00000354880 SCN5AQ14524 2016 aa16.69■□□□□ 0.26
CTSA-202ENST00000354880 CXCL10P02778 98 aa16.68■□□□□ 0.26
CTSA-202ENST00000354880 ZNF132P52740 706 aa16.68■□□□□ 0.26
CTSA-202ENST00000354880 CDH8P55286 799 aa16.68■□□□□ 0.26
CTSA-202ENST00000354880 NAB2Q15742 525 aa16.68■□□□□ 0.26
CTSA-202ENST00000354880 CCDC122Q5T0U0 273 aa16.68■□□□□ 0.26
CTSA-202ENST00000354880 C10orf76Q5T2E6 689 aa16.68■□□□□ 0.26
CTSA-202ENST00000354880 TAF3Q5VWG9 929 aa16.68■□□□□ 0.26
CTSA-202ENST00000354880 ZNF662Q6ZS27 426 aa16.68■□□□□ 0.26
CTSA-202ENST00000354880 RPUSD2Q8IZ73 545 aaKnown RBP16.68■□□□□ 0.26
CTSA-202ENST00000354880 TXLNBQ8N3L3 684 aa16.68■□□□□ 0.26
CTSA-202ENST00000354880 DDX1Q92499 740 aaKnown RBP16.68■□□□□ 0.26
CTSA-202ENST00000354880 MMS19Q96T76 1030 aa16.68■□□□□ 0.26
CTSA-202ENST00000354880 SMYD3Q9H7B4 428 aa16.68■□□□□ 0.26
CTSA-202ENST00000354880 SEPT11Q9NVA2 429 aaKnown RBP16.68■□□□□ 0.26
CTSA-202ENST00000354880 NENFQ9UMX5 172 aa16.68■□□□□ 0.26
CTSA-202ENST00000354880 RCCD1A6NED2 376 aa16.68■□□□□ 0.26
CTSA-202ENST00000354880 RAP1GAPP47736 663 aa16.68■□□□□ 0.26
CTSA-202ENST00000354880 CDR2Q01850 454 aa16.68■□□□□ 0.26
CTSA-202ENST00000354880 KIF5AQ12840 1032 aa16.68■□□□□ 0.26
CTSA-202ENST00000354880 ZNF677Q86XU0 584 aa16.68■□□□□ 0.26
CTSA-202ENST00000354880 SDCBP2Q9H190 292 aa16.68■□□□□ 0.26
CTSA-202ENST00000354880 FAM124BQ9H5Z6 455 aaPredicted RBP16.68■□□□□ 0.26
CTSA-202ENST00000354880 TFR2Q9UP52 801 aa16.68■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms