RNA–Protein interactions for RNA: ENST00000354828.7

GABPA-201, Transcript of GA binding protein transcription factor subunit alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GABPA, Length 5,120 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABPA-201ENST00000354828 AXLP30530 894 aa10.25□□□□□ -0.77
GABPA-201ENST00000354828 TWF1Q12792 350 aa10.25□□□□□ -0.77
GABPA-201ENST00000354828 SFSWAPQ12872 951 aaKnown RBP10.25□□□□□ -0.77
GABPA-201ENST00000354828 ATP6V0D2Q8N8Y2 350 aa10.25□□□□□ -0.77
GABPA-201ENST00000354828 THG1LQ9NWX6 298 aaKnown RBP10.25□□□□□ -0.77
GABPA-201ENST00000354828 BFARQ9NZS9 450 aa10.25□□□□□ -0.77
GABPA-201ENST00000354828 RNF14Q9UBS8 474 aa10.25□□□□□ -0.77
GABPA-201ENST00000354828 TSR3Q9UJK0 312 aaKnown RBP10.25□□□□□ -0.77
GABPA-201ENST00000354828 TEX33O43247 280 aa10.24□□□□□ -0.77
GABPA-201ENST00000354828 ROR1Q01973 937 aa10.24□□□□□ -0.77
GABPA-201ENST00000354828 FBXO47Q5MNV8 452 aa10.24□□□□□ -0.77
GABPA-201ENST00000354828 THEMIS2Q5TEJ8 643 aa10.24□□□□□ -0.77
GABPA-201ENST00000354828 ATP8A1Q9Y2Q0 1164 aa10.24□□□□□ -0.77
GABPA-201ENST00000354828 PCDHB2Q9Y5E7 798 aa10.24□□□□□ -0.77
GABPA-201ENST00000354828 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP10.24□□□□□ -0.77
GABPA-201ENST00000354828 TTC26A0AVF1 554 aa10.24□□□□□ -0.77
GABPA-201ENST00000354828 RTN2O75298 545 aa10.24□□□□□ -0.77
GABPA-201ENST00000354828 APLP1P51693 650 aa10.24□□□□□ -0.77
GABPA-201ENST00000354828 ZNF177Q13360 481 aaPredicted RBP10.24□□□□□ -0.77
GABPA-201ENST00000354828 ATXN3LQ9H3M9 355 aa10.24□□□□□ -0.77
GABPA-201ENST00000354828 PEAK1Q9H792 1746 aa10.24□□□□□ -0.77
GABPA-201ENST00000354828 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP10.24□□□□□ -0.77
GABPA-201ENST00000354828 MT-ND3P03897 115 aa10.24□□□□□ -0.77
GABPA-201ENST00000354828 GARTP22102 1010 aa10.24□□□□□ -0.77
GABPA-201ENST00000354828 PRMT2P55345 433 aa10.24□□□□□ -0.77
GABPA-201ENST00000354828 ASAP3Q8TDY4 903 aa10.24□□□□□ -0.77
GABPA-201ENST00000354828 DDI1Q8WTU0 396 aa10.24□□□□□ -0.77
GABPA-201ENST00000354828 CALR3Q96L12 384 aaKnown RBP10.24□□□□□ -0.77
GABPA-201ENST00000354828 RPRD1AQ96P16 312 aaPredicted RBP10.24□□□□□ -0.77
GABPA-201ENST00000354828 MCEEQ96PE7 176 aa10.24□□□□□ -0.77
GABPA-201ENST00000354828 CATSPERBQ9H7T0 1116 aa10.24□□□□□ -0.77
GABPA-201ENST00000354828 DBR1Q9UK59 544 aaKnown RBP10.24□□□□□ -0.77
GABPA-201ENST00000354828 TMEM150BA6NC51 233 aa10.24□□□□□ -0.77
GABPA-201ENST00000354828 FAM47DPA6NHR8 397 aa10.24□□□□□ -0.77
GABPA-201ENST00000354828 RNF40O75150 1001 aa10.24□□□□□ -0.77
GABPA-201ENST00000354828 MCF2P10911 925 aa10.24□□□□□ -0.77
GABPA-201ENST00000354828 SLC2A3P11169 496 aa10.24□□□□□ -0.77
GABPA-201ENST00000354828 CKBP12277 381 aa10.24□□□□□ -0.77
GABPA-201ENST00000354828 MRPS6P82932 125 aaKnown RBP10.24□□□□□ -0.77
GABPA-201ENST00000354828 ZNF211Q13398 564 aaPredicted RBP10.24□□□□□ -0.77
GABPA-201ENST00000354828 ITGA7Q13683 1181 aa10.24□□□□□ -0.77
GABPA-201ENST00000354828 JADE1Q6IE81 842 aa10.24□□□□□ -0.77
GABPA-201ENST00000354828 PDXDC1Q6P996 788 aa10.24□□□□□ -0.77
GABPA-201ENST00000354828 SCFD1Q8WVM8 642 aa10.24□□□□□ -0.77
GABPA-201ENST00000354828 SNX19Q92543 992 aa10.24□□□□□ -0.77
GABPA-201ENST00000354828 PGLYRP2Q96PD5 576 aa10.24□□□□□ -0.77
GABPA-201ENST00000354828 CBWD1Q9BRT8 395 aa10.24□□□□□ -0.77
GABPA-201ENST00000354828 TTC7AQ9ULT0 858 aaPredicted RBP10.24□□□□□ -0.77
GABPA-201ENST00000354828 RNASEH1O60930 286 aaKnown RBP10.23□□□□□ -0.77
GABPA-201ENST00000354828 GRIN1Q05586 938 aa10.23□□□□□ -0.77
GABPA-201ENST00000354828 PLD1Q13393 1074 aa10.23□□□□□ -0.77
GABPA-201ENST00000354828 NBPF20Q3BBV1 942 aa10.23□□□□□ -0.77
GABPA-201ENST00000354828 EPC2Q52LR7 807 aa10.23□□□□□ -0.77
GABPA-201ENST00000354828 GAD1Q99259 594 aa10.23□□□□□ -0.77
GABPA-201ENST00000354828 CIPCQ9C0C6 399 aa10.23□□□□□ -0.77
GABPA-201ENST00000354828 RABEP2Q9H5N1 569 aa10.23□□□□□ -0.77
GABPA-201ENST00000354828 PRDM10Q9NQV6 1147 aa10.23□□□□□ -0.77
GABPA-201ENST00000354828 MRPL17Q9NRX2 175 aaKnown RBP10.23□□□□□ -0.77
GABPA-201ENST00000354828 DDIT4Q9NX09 232 aa10.23□□□□□ -0.77
GABPA-201ENST00000354828 PCDHB5Q9Y5E4 795 aa10.23□□□□□ -0.77
GABPA-201ENST00000354828 GOLGA8MH3BSY2 632 aa10.23□□□□□ -0.77
GABPA-201ENST00000354828 SYNCRIPO60506 623 aaKnown RBP10.23□□□□□ -0.77
GABPA-201ENST00000354828 SNX2O60749 519 aa10.23□□□□□ -0.77
GABPA-201ENST00000354828 INHAP05111 366 aa10.23□□□□□ -0.77
GABPA-201ENST00000354828 UCHL3P15374 230 aa10.23□□□□□ -0.77
GABPA-201ENST00000354828 AKT1P31749 480 aa10.23□□□□□ -0.77
GABPA-201ENST00000354828 ZNF280AP59817 542 aaPredicted RBP10.23□□□□□ -0.77
GABPA-201ENST00000354828 C2orf54Q08AI8 447 aa10.23□□□□□ -0.77
GABPA-201ENST00000354828 TAF1BQ53T94 588 aaPredicted RBP10.23□□□□□ -0.77
GABPA-201ENST00000354828 MDH1BQ5I0G3 518 aa10.23□□□□□ -0.77
GABPA-201ENST00000354828 PALB2Q86YC2 1186 aa10.23□□□□□ -0.77
GABPA-201ENST00000354828 ANKS1AQ92625 1134 aa10.23□□□□□ -0.77
GABPA-201ENST00000354828 MCUR1Q96AQ8 359 aa10.23□□□□□ -0.77
GABPA-201ENST00000354828 KRT82Q9NSB4 513 aa10.23□□□□□ -0.77
GABPA-201ENST00000354828 PARP4Q9UKK3 1724 aaKnown RBP10.23□□□□□ -0.77
GABPA-201ENST00000354828 FZD9O00144 591 aa10.23□□□□□ -0.77
GABPA-201ENST00000354828 RARRES1P49788 294 aa10.23□□□□□ -0.77
GABPA-201ENST00000354828 EFEMP1Q12805 493 aa10.23□□□□□ -0.77
GABPA-201ENST00000354828 TMED2Q15363 201 aa10.23□□□□□ -0.77
GABPA-201ENST00000354828 DLK2Q6UY11 383 aa10.23□□□□□ -0.77
GABPA-201ENST00000354828 KLHL11Q9NVR0 708 aa10.23□□□□□ -0.77
GABPA-201ENST00000354828 DDX43Q9NXZ2 648 aaKnown RBP10.23□□□□□ -0.77
GABPA-201ENST00000354828 NDUFAB1O14561 156 aa10.23□□□□□ -0.77
GABPA-201ENST00000354828 SLC9A1P19634 815 aa10.23□□□□□ -0.77
GABPA-201ENST00000354828 MX2P20592 715 aa10.23□□□□□ -0.77
GABPA-201ENST00000354828 ETFBP38117 255 aa10.23□□□□□ -0.77
GABPA-201ENST00000354828 ARL4CP56559 192 aa10.23□□□□□ -0.77
GABPA-201ENST00000354828 CRHR2Q13324 411 aa10.23□□□□□ -0.77
GABPA-201ENST00000354828 CUL2Q13617 745 aa10.23□□□□□ -0.77
GABPA-201ENST00000354828 GIT2Q14161 759 aa10.23□□□□□ -0.77
GABPA-201ENST00000354828 RAB42Q8N4Z0 105 aa10.23□□□□□ -0.77
GABPA-201ENST00000354828 SCG3Q8WXD2 468 aaKnown RBP10.23□□□□□ -0.77
GABPA-201ENST00000354828 SLC5A5Q92911 643 aa10.23□□□□□ -0.77
GABPA-201ENST00000354828 STMN2Q93045 179 aa10.23□□□□□ -0.77
GABPA-201ENST00000354828 CYFIP2Q96F07 1278 aa10.23□□□□□ -0.77
GABPA-201ENST00000354828 FTHL17Q9BXU8 183 aa10.23□□□□□ -0.77
GABPA-201ENST00000354828 HDAC6Q9UBN7 1215 aa10.23□□□□□ -0.77
GABPA-201ENST00000354828 ZMYND8Q9ULU4 1186 aaPredicted RBP10.23□□□□□ -0.77
GABPA-201ENST00000354828 DIS3Q9Y2L1 958 aaKnown RBP10.23□□□□□ -0.77
GABPA-201ENST00000354828 CARNS1A5YM72 827 aa10.22□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 76.6 ms