RNA–Protein interactions for RNA: ENST00000354757.4

PCDHB11-201, Transcript of protocadherin beta 11, humanhuman

APPRIS P1 BASIC

Gene PCDHB11, Length 4,198 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB11-201ENST00000354757 IP6K2Q9UHH9 426 aa13.07□□□□□ -0.32
PCDHB11-201ENST00000354757 COL16A1Q07092 1604 aaPredicted RBP13.07□□□□□ -0.32
PCDHB11-201ENST00000354757 CNTNAP1P78357 1384 aa13.07□□□□□ -0.32
PCDHB11-201ENST00000354757 KIAA0100Q14667 2235 aaKnown RBP13.07□□□□□ -0.32
PCDHB11-201ENST00000354757 SPATA31C2B4DYI2 1134 aa13.06□□□□□ -0.32
PCDHB11-201ENST00000354757 YBX3P16989 372 aaKnown RBP eCLIP13.06□□□□□ -0.32
PCDHB11-201ENST00000354757 GRIK1P39086 918 aa13.06□□□□□ -0.32
PCDHB11-201ENST00000354757 LMNB2Q03252 620 aa13.06□□□□□ -0.32
PCDHB11-201ENST00000354757 GPS1Q13098 491 aa13.06□□□□□ -0.32
PCDHB11-201ENST00000354757 CAPSQ13938 189 aa13.06□□□□□ -0.32
PCDHB11-201ENST00000354757 CFAP157Q5JU67 520 aa13.06□□□□□ -0.32
PCDHB11-201ENST00000354757 SREK1Q8WXA9 508 aaKnown RBP13.06□□□□□ -0.32
PCDHB11-201ENST00000354757 VTA1Q9NP79 307 aa13.06□□□□□ -0.32
PCDHB11-201ENST00000354757 SAYSD1Q9NPB0 183 aa13.06□□□□□ -0.32
PCDHB11-201ENST00000354757 CCDC78A2IDD5 438 aa13.06□□□□□ -0.32
PCDHB11-201ENST00000354757 GAS2O43903 313 aaKnown RBP13.06□□□□□ -0.32
PCDHB11-201ENST00000354757 HSPA6P17066 643 aa13.06□□□□□ -0.32
PCDHB11-201ENST00000354757 CLK2P49760 499 aaKnown RBP13.06□□□□□ -0.32
PCDHB11-201ENST00000354757 SLC26A2P50443 739 aa13.06□□□□□ -0.32
PCDHB11-201ENST00000354757 CLNS1AP54105 237 aaKnown RBP13.06□□□□□ -0.32
PCDHB11-201ENST00000354757 EEF1DP3Q658K8 133 aa13.06□□□□□ -0.32
PCDHB11-201ENST00000354757 FOXR1Q6PIV2 292 aa13.06□□□□□ -0.32
PCDHB11-201ENST00000354757 CFAP36Q96G28 342 aa13.06□□□□□ -0.32
PCDHB11-201ENST00000354757 RBM41Q96IZ5 413 aaKnown RBP13.06□□□□□ -0.32
PCDHB11-201ENST00000354757 DYNC1LI1Q9Y6G9 523 aaKnown RBP13.06□□□□□ -0.32
PCDHB11-201ENST00000354757 ATRNL1Q5VV63 1379 aa13.06□□□□□ -0.32
PCDHB11-201ENST00000354757 LRRIQ3A6PVS8 624 aaPredicted RBP13.06□□□□□ -0.32
PCDHB11-201ENST00000354757 PQBP1O60828 265 aaKnown RBP13.06□□□□□ -0.32
PCDHB11-201ENST00000354757 GNL1P36915 607 aaPredicted RBP13.06□□□□□ -0.32
PCDHB11-201ENST00000354757 SLC12A2P55011 1212 aa13.06□□□□□ -0.32
PCDHB11-201ENST00000354757 PDE1BQ01064 536 aa13.06□□□□□ -0.32
PCDHB11-201ENST00000354757 DCAF6Q58WW2 860 aa13.06□□□□□ -0.32
PCDHB11-201ENST00000354757 MIIPQ5JXC2 388 aa13.06□□□□□ -0.32
PCDHB11-201ENST00000354757 TRIM72Q6ZMU5 477 aa13.06□□□□□ -0.32
PCDHB11-201ENST00000354757 TXNRD2Q9NNW7 524 aa13.06□□□□□ -0.32
PCDHB11-201ENST00000354757 WDR91A4D1P6 747 aa13.06□□□□□ -0.32
PCDHB11-201ENST00000354757 AKR1A1P14550 325 aa13.06□□□□□ -0.32
PCDHB11-201ENST00000354757 ACO1P21399 889 aaKnown RBP13.06□□□□□ -0.32
PCDHB11-201ENST00000354757 KCNJ6P48051 423 aa13.06□□□□□ -0.32
PCDHB11-201ENST00000354757 FLT3LGP49771 235 aa13.06□□□□□ -0.32
PCDHB11-201ENST00000354757 SEPT6Q14141 434 aa13.06□□□□□ -0.32
PCDHB11-201ENST00000354757 MFSD10Q14728 455 aa13.06□□□□□ -0.32
PCDHB11-201ENST00000354757 MAP4K3Q8IVH8 894 aa13.06□□□□□ -0.32
PCDHB11-201ENST00000354757 SPATA20Q8TB22 786 aa13.06□□□□□ -0.32
PCDHB11-201ENST00000354757 FAF2Q96CS3 445 aa13.06□□□□□ -0.32
PCDHB11-201ENST00000354757 STARD7Q9NQZ5 370 aa13.06□□□□□ -0.32
PCDHB11-201ENST00000354757 METTL5Q9NRN9 209 aaKnown RBP13.06□□□□□ -0.32
PCDHB11-201ENST00000354757 WRAP73Q9P2S5 460 aaPredicted RBP13.06□□□□□ -0.32
PCDHB11-201ENST00000354757 GOLGA4Q13439 2230 aaKnown RBP13.05□□□□□ -0.32
PCDHB11-201ENST00000354757 INHBAP08476 426 aa13.05□□□□□ -0.32
PCDHB11-201ENST00000354757 GOLGA7BQ2TAP0 167 aa13.05□□□□□ -0.32
PCDHB11-201ENST00000354757 FBXW10Q5XX13 1052 aa13.05□□□□□ -0.32
PCDHB11-201ENST00000354757 DCLK2Q8N568 766 aa13.05□□□□□ -0.32
PCDHB11-201ENST00000354757 ATG4AQ8WYN0 398 aa13.05□□□□□ -0.32
PCDHB11-201ENST00000354757 BHMTQ93088 406 aa13.05□□□□□ -0.32
PCDHB11-201ENST00000354757 ABI2Q9NYB9 513 aaPredicted RBP13.05□□□□□ -0.32
PCDHB11-201ENST00000354757 KLHL8Q9P2G9 620 aaPredicted RBP13.05□□□□□ -0.32
PCDHB11-201ENST00000354757 CPSF3Q9UKF6 684 aaKnown RBP13.05□□□□□ -0.32
PCDHB11-201ENST00000354757 STAP1Q9ULZ2 295 aa13.05□□□□□ -0.32
PCDHB11-201ENST00000354757 LTBP4Q8N2S1 1624 aa13.05□□□□□ -0.32
PCDHB11-201ENST00000354757 SOWAHBA6NEL2 793 aa13.05□□□□□ -0.32
PCDHB11-201ENST00000354757 FARP2O94887 1054 aaPredicted RBP13.05□□□□□ -0.32
PCDHB11-201ENST00000354757 IL18RAPO95256 599 aa13.05□□□□□ -0.32
PCDHB11-201ENST00000354757 KCNMA1Q12791 1236 aa13.05□□□□□ -0.32
PCDHB11-201ENST00000354757 NNTQ13423 1086 aa13.05□□□□□ -0.32
PCDHB11-201ENST00000354757 DRP2Q13474 957 aa13.05□□□□□ -0.32
PCDHB11-201ENST00000354757 PDIK1LQ8N165 341 aa13.05□□□□□ -0.32
PCDHB11-201ENST00000354757 CGRRF1Q99675 332 aa13.05□□□□□ -0.32
PCDHB11-201ENST00000354757 RNPEPQ9H4A4 650 aa13.05□□□□□ -0.32
PCDHB11-201ENST00000354757 PLAAQ9Y263 795 aa13.05□□□□□ -0.32
PCDHB11-201ENST00000354757 PLIN4Q96Q06 1357 aa13.05□□□□□ -0.32
PCDHB11-201ENST00000354757 EXOC1LA0A1B0GW35 172 aa13.05□□□□□ -0.32
PCDHB11-201ENST00000354757 LRRC10BA6NIK2 292 aa13.05□□□□□ -0.32
PCDHB11-201ENST00000354757 CPP00450 1065 aa13.05□□□□□ -0.32
PCDHB11-201ENST00000354757 TMEM253P0C7T8 217 aa13.05□□□□□ -0.32
PCDHB11-201ENST00000354757 ARL13BQ3SXY8 428 aa13.05□□□□□ -0.32
PCDHB11-201ENST00000354757 PPP1R2P3Q6NXS1 205 aa13.05□□□□□ -0.32
PCDHB11-201ENST00000354757 PYROXD1Q8WU10 500 aa13.05□□□□□ -0.32
PCDHB11-201ENST00000354757 PDCD6IPQ8WUM4 868 aaKnown RBP13.05□□□□□ -0.32
PCDHB11-201ENST00000354757 BSNDQ8WZ55 320 aa13.05□□□□□ -0.32
PCDHB11-201ENST00000354757 TEPSINQ96N21 525 aa13.05□□□□□ -0.32
PCDHB11-201ENST00000354757 SPON2Q9BUD6 331 aa13.05□□□□□ -0.32
PCDHB11-201ENST00000354757 ARHGEF37A1IGU5 675 aa13.04□□□□□ -0.32
PCDHB11-201ENST00000354757 ACKR2O00590 384 aa13.04□□□□□ -0.32
PCDHB11-201ENST00000354757 P4HA2O15460 535 aa13.04□□□□□ -0.32
PCDHB11-201ENST00000354757 KRT10P13645 584 aa13.04□□□□□ -0.32
PCDHB11-201ENST00000354757 PHBP35232 272 aa13.04□□□□□ -0.32
PCDHB11-201ENST00000354757 CDR2Q01850 454 aa13.04□□□□□ -0.32
PCDHB11-201ENST00000354757 E2F5Q15329 346 aa13.04□□□□□ -0.32
PCDHB11-201ENST00000354757 DEFB115Q30KQ5 88 aa13.04□□□□□ -0.32
PCDHB11-201ENST00000354757 LGSNQ5TDP6 509 aa13.04□□□□□ -0.32
PCDHB11-201ENST00000354757 OR5B17Q8NGF7 314 aa13.04□□□□□ -0.32
PCDHB11-201ENST00000354757 TBC1D31Q96DN5 1066 aa13.04□□□□□ -0.32
PCDHB11-201ENST00000354757 THOC1Q96FV9 657 aaKnown RBP13.04□□□□□ -0.32
PCDHB11-201ENST00000354757 AGAP3Q96P47 875 aa13.04□□□□□ -0.32
PCDHB11-201ENST00000354757 SEPT5Q99719 369 aaPredicted RBP13.04□□□□□ -0.32
PCDHB11-201ENST00000354757 NCAPGQ9BPX3 1015 aa13.04□□□□□ -0.32
PCDHB11-201ENST00000354757 RBPJLQ9UBG7 517 aa13.04□□□□□ -0.32
PCDHB11-201ENST00000354757 MYH13Q9UKX3 1938 aa13.04□□□□□ -0.32
PCDHB11-201ENST00000354757 PHF20L1A8MW92 1017 aa13.04□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms