RNA–Protein interactions for RNA: ENST00000354433.7

CDRT1-202, CMT1A duplicated region transcript 1, humanhuman

TSL 2 BASIC

Gene CDRT1, Length 1,557 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDRT1-202ENST00000354433 ALKAL1Q6UXT8 129 aa12.51□□□□□ -0.41
CDRT1-202ENST00000354433 SV2BQ7L1I2 683 aa12.51□□□□□ -0.41
CDRT1-202ENST00000354433 DYMQ7RTS9 669 aa12.51□□□□□ -0.41
CDRT1-202ENST00000354433 FAM212AQ96EL1 285 aa12.51□□□□□ -0.41
CDRT1-202ENST00000354433 KIF12Q96FN5 646 aa12.51□□□□□ -0.41
CDRT1-202ENST00000354433 KCNK12Q9HB15 430 aa12.51□□□□□ -0.41
CDRT1-202ENST00000354433 TUBGCP4Q9UGJ1 667 aa12.51□□□□□ -0.41
CDRT1-202ENST00000354433 TBX20Q9UMR3 447 aa12.51□□□□□ -0.41
CDRT1-202ENST00000354433 MYH11P35749 1972 aa12.5□□□□□ -0.41
CDRT1-202ENST00000354433 ESPNB1AK53 854 aa12.5□□□□□ -0.41
CDRT1-202ENST00000354433 PPP1R3GB7ZBB8 358 aa12.5□□□□□ -0.41
CDRT1-202ENST00000354433 TULP1O00294 542 aaPredicted RBP12.5□□□□□ -0.41
CDRT1-202ENST00000354433 CCL16O15467 120 aa12.5□□□□□ -0.41
CDRT1-202ENST00000354433 CBFA2T2O43439 604 aa12.5□□□□□ -0.41
CDRT1-202ENST00000354433 XYLBO75191 536 aa12.5□□□□□ -0.41
CDRT1-202ENST00000354433 RHOBTB3O94955 611 aa12.5□□□□□ -0.41
CDRT1-202ENST00000354433 CLTAP09496 248 aa12.5□□□□□ -0.41
CDRT1-202ENST00000354433 RPL9P32969 192 aaKnown RBP12.5□□□□□ -0.41
CDRT1-202ENST00000354433 ZNF131P52739 623 aa12.5□□□□□ -0.41
CDRT1-202ENST00000354433 ARPP19P56211 112 aa12.5□□□□□ -0.41
CDRT1-202ENST00000354433 TDGQ13569 410 aa12.5□□□□□ -0.41
CDRT1-202ENST00000354433 SLC10A6Q3KNW5 377 aa12.5□□□□□ -0.41
CDRT1-202ENST00000354433 VARS2Q5ST30 1063 aaKnown RBP12.5□□□□□ -0.41
CDRT1-202ENST00000354433 GRASPQ7Z6J2 395 aaPredicted RBP12.5□□□□□ -0.41
CDRT1-202ENST00000354433 MSTO1Q9BUK6 570 aa12.5□□□□□ -0.41
CDRT1-202ENST00000354433 RHOBTB2Q9BYZ6 727 aa12.5□□□□□ -0.41
CDRT1-202ENST00000354433 TRIM9Q9C026 710 aa12.5□□□□□ -0.41
CDRT1-202ENST00000354433 KCNH6Q9H252 994 aa12.5□□□□□ -0.41
CDRT1-202ENST00000354433 HSD3B7Q9H2F3 369 aa12.5□□□□□ -0.41
CDRT1-202ENST00000354433 BLZF1Q9H2G9 400 aa12.5□□□□□ -0.41
CDRT1-202ENST00000354433 FBXL21Q9UKT6 434 aa12.5□□□□□ -0.41
CDRT1-202ENST00000354433 DENND4AQ7Z401 1863 aa12.5□□□□□ -0.41
CDRT1-202ENST00000354433 SYN3O14994 580 aa12.49□□□□□ -0.41
CDRT1-202ENST00000354433 XPOTO43592 962 aaKnown RBP12.49□□□□□ -0.41
CDRT1-202ENST00000354433 KLRC4O43908 158 aa12.49□□□□□ -0.41
CDRT1-202ENST00000354433 N4BP1O75113 896 aaKnown RBP12.49□□□□□ -0.41
CDRT1-202ENST00000354433 HNRNPA1P09651 372 aaKnown RBP eCLIP12.49□□□□□ -0.41
CDRT1-202ENST00000354433 SCP2P22307 547 aa12.49□□□□□ -0.41
CDRT1-202ENST00000354433 CASP1P29466 404 aa12.49□□□□□ -0.41
CDRT1-202ENST00000354433 NMT1P30419 496 aaKnown RBP12.49□□□□□ -0.41
CDRT1-202ENST00000354433 ELF1P32519 619 aa12.49□□□□□ -0.41
CDRT1-202ENST00000354433 ABCD1P33897 745 aa12.49□□□□□ -0.41
CDRT1-202ENST00000354433 TNFSF9P41273 254 aa12.49□□□□□ -0.41
CDRT1-202ENST00000354433 VCPP55072 806 aaKnown RBP12.49□□□□□ -0.41
CDRT1-202ENST00000354433 RAB33AQ14088 237 aa12.49□□□□□ -0.41
CDRT1-202ENST00000354433 COBLL1Q53SF7 1204 aa12.49□□□□□ -0.41
CDRT1-202ENST00000354433 SPATA1Q5VX52 437 aa12.49□□□□□ -0.41
CDRT1-202ENST00000354433 ZNF280DQ6N043 979 aa12.49□□□□□ -0.41
CDRT1-202ENST00000354433 MYADMQ96S97 322 aa12.49□□□□□ -0.41
CDRT1-202ENST00000354433 HAPLN2Q9GZV7 340 aa12.49□□□□□ -0.41
CDRT1-202ENST00000354433 RPF1Q9H9Y2 349 aaKnown RBP12.49□□□□□ -0.41
CDRT1-202ENST00000354433 IGSF9Q9P2J2 1179 aa12.49□□□□□ -0.41
CDRT1-202ENST00000354433 DUSP12Q9UNI6 340 aa12.49□□□□□ -0.41
CDRT1-202ENST00000354433 ZKSCAN5Q9Y2L8 839 aa12.49□□□□□ -0.41
CDRT1-202ENST00000354433 BACE2Q9Y5Z0 518 aa12.49□□□□□ -0.41
CDRT1-202ENST00000354433 MUC6Q6W4X9 2439 aa12.49□□□□□ -0.41
CDRT1-202ENST00000354433 C2orf16Q68DN1 1984 aa12.49□□□□□ -0.41
CDRT1-202ENST00000354433 PVALEFA0A1B0GWK0 134 aa12.48□□□□□ -0.41
CDRT1-202ENST00000354433 OGTO15294 1046 aa12.48□□□□□ -0.41
CDRT1-202ENST00000354433 MEFVO15553 781 aaPredicted RBP12.48□□□□□ -0.41
CDRT1-202ENST00000354433 ZNF18P17022 549 aa12.48□□□□□ -0.41
CDRT1-202ENST00000354433 RFX1P22670 979 aa12.48□□□□□ -0.41
CDRT1-202ENST00000354433 FSHRP23945 695 aa12.48□□□□□ -0.41
CDRT1-202ENST00000354433 ROR1Q01973 937 aa12.48□□□□□ -0.41
CDRT1-202ENST00000354433 KYAT1Q16773 422 aa12.48□□□□□ -0.41
CDRT1-202ENST00000354433 ZBTB41Q5SVQ8 909 aa12.48□□□□□ -0.41
CDRT1-202ENST00000354433 CD300LGQ6UXG3 332 aa12.48□□□□□ -0.41
CDRT1-202ENST00000354433 RSPO2Q6UXX9 243 aaPredicted RBP12.48□□□□□ -0.41
CDRT1-202ENST00000354433 SFR1Q86XK3 245 aa12.48□□□□□ -0.41
CDRT1-202ENST00000354433 MAP4K3Q8IVH8 894 aa12.48□□□□□ -0.41
CDRT1-202ENST00000354433 FLCNQ8NFG4 579 aa12.48□□□□□ -0.41
CDRT1-202ENST00000354433 RSAD2Q8WXG1 361 aa12.48□□□□□ -0.41
CDRT1-202ENST00000354433 PLEKHA5Q9HAU0 1116 aa12.48□□□□□ -0.41
CDRT1-202ENST00000354433 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP12.48□□□□□ -0.41
CDRT1-202ENST00000354433 RWDD2AQ9UIY3 292 aa12.48□□□□□ -0.41
CDRT1-202ENST00000354433 UBQLN1Q9UMX0 589 aaKnown RBP12.48□□□□□ -0.41
CDRT1-202ENST00000354433 H7C4K7 107 aa12.47□□□□□ -0.41
CDRT1-202ENST00000354433 PRRG1O14668 218 aa12.47□□□□□ -0.41
CDRT1-202ENST00000354433 LRG1P02750 347 aa12.47□□□□□ -0.41
CDRT1-202ENST00000354433 CFHP08603 1231 aa12.47□□□□□ -0.41
CDRT1-202ENST00000354433 IDEP14735 1019 aa12.47□□□□□ -0.41
CDRT1-202ENST00000354433 CPB1P15086 417 aa12.47□□□□□ -0.41
CDRT1-202ENST00000354433 MSNP26038 577 aaKnown RBP12.47□□□□□ -0.41
CDRT1-202ENST00000354433 AVPR2P30518 371 aa12.47□□□□□ -0.41
CDRT1-202ENST00000354433 HOXA9P31269 272 aa12.47□□□□□ -0.41
CDRT1-202ENST00000354433 NTHL1P78549 312 aa12.47□□□□□ -0.41
CDRT1-202ENST00000354433 FANCCQ00597 558 aa12.47□□□□□ -0.41
CDRT1-202ENST00000354433 NHLH1Q02575 133 aa12.47□□□□□ -0.41
CDRT1-202ENST00000354433 STIM1Q13586 685 aa12.47□□□□□ -0.41
CDRT1-202ENST00000354433 KMT5BQ4FZB7 885 aa12.47□□□□□ -0.41
CDRT1-202ENST00000354433 CTXN3Q4LDR2 81 aa12.47□□□□□ -0.41
CDRT1-202ENST00000354433 ZC2HC1CQ53FD0 456 aaPredicted RBP12.47□□□□□ -0.41
CDRT1-202ENST00000354433 IER5LQ5T953 404 aa12.47□□□□□ -0.41
CDRT1-202ENST00000354433 UNC13DQ70J99 1090 aa12.47□□□□□ -0.41
CDRT1-202ENST00000354433 DRC7Q8IY82 874 aa12.47□□□□□ -0.41
CDRT1-202ENST00000354433 APPL2Q8NEU8 664 aa12.47□□□□□ -0.41
CDRT1-202ENST00000354433 ST13P5Q8NFI4 369 aaPredicted RBP12.47□□□□□ -0.41
CDRT1-202ENST00000354433 DDX12PQ92771 950 aa12.47□□□□□ -0.41
CDRT1-202ENST00000354433 PRRX2Q99811 253 aa12.47□□□□□ -0.41
CDRT1-202ENST00000354433 MRPL44Q9H9J2 332 aaKnown RBP12.47□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms