RNA–Protein interactions for RNA: ENST00000354291.8

DDX55-202, Transcript of DEAD-box helicase 55, humanhuman

TSL 5

Gene DDX55, Length 1,004 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX55-202ENST00000354291 COL4A2P08572 1712 aa17.41■□□□□ 0.38
DDX55-202ENST00000354291 CCDC163A0A0D9SF12 145 aa17.41■□□□□ 0.38
DDX55-202ENST00000354291 A0A1W2PRU2 124 aa17.41■□□□□ 0.38
DDX55-202ENST00000354291 CDKL5O76039 1030 aa17.41■□□□□ 0.38
DDX55-202ENST00000354291 CAVIN2O95810 425 aa17.41■□□□□ 0.38
DDX55-202ENST00000354291 GCFC2P16383 781 aaKnown RBP17.41■□□□□ 0.38
DDX55-202ENST00000354291 RARRES1P49788 294 aa17.41■□□□□ 0.38
DDX55-202ENST00000354291 FAM187BQ17R55 369 aa17.41■□□□□ 0.38
DDX55-202ENST00000354291 PLK5Q496M5 336 aa17.41■□□□□ 0.38
DDX55-202ENST00000354291 HAUS6Q7Z4H7 955 aa17.41■□□□□ 0.38
DDX55-202ENST00000354291 POTEDQ86YR6 584 aa17.41■□□□□ 0.38
DDX55-202ENST00000354291 ARID3BQ8IVW6 561 aaPredicted RBP17.41■□□□□ 0.38
DDX55-202ENST00000354291 LRRC3BQ96PB8 259 aa17.41■□□□□ 0.38
DDX55-202ENST00000354291 POLR3BQ9NW08 1133 aaPredicted RBP17.41■□□□□ 0.38
DDX55-202ENST00000354291 FLNBO75369 2602 aaKnown RBP17.41■□□□□ 0.38
DDX55-202ENST00000354291 GCN1Q92616 2671 aaKnown RBP17.41■□□□□ 0.38
DDX55-202ENST00000354291 EPHA5P54756 1037 aa17.4■□□□□ 0.38
DDX55-202ENST00000354291 TNK2Q07912 1038 aa17.4■□□□□ 0.38
DDX55-202ENST00000354291 MAPK6Q16659 721 aa17.4■□□□□ 0.38
DDX55-202ENST00000354291 KIAA1211LQ6NV74 962 aa17.4■□□□□ 0.38
DDX55-202ENST00000354291 SLFN12Q8IYM2 578 aa17.4■□□□□ 0.38
DDX55-202ENST00000354291 HSD17B14Q9BPX1 270 aa17.4■□□□□ 0.38
DDX55-202ENST00000354291 DUSP15Q9H1R2 295 aaPredicted RBP17.4■□□□□ 0.38
DDX55-202ENST00000354291 AFF4Q9UHB7 1163 aaKnown RBP17.4■□□□□ 0.38
DDX55-202ENST00000354291 SMIM28A0A1B0GU29 152 aa17.39■□□□□ 0.37
DDX55-202ENST00000354291 ACKR2O00590 384 aa17.39■□□□□ 0.37
DDX55-202ENST00000354291 PODXLO00592 558 aa17.39■□□□□ 0.37
DDX55-202ENST00000354291 DCLK1O15075 740 aa17.39■□□□□ 0.37
DDX55-202ENST00000354291 EIF5BO60841 1220 aaKnown RBP17.39■□□□□ 0.37
DDX55-202ENST00000354291 ATG13O75143 517 aa17.39■□□□□ 0.37
DDX55-202ENST00000354291 AKAP3O75969 853 aa17.39■□□□□ 0.37
DDX55-202ENST00000354291 RHOBTB1O94844 696 aa17.39■□□□□ 0.37
DDX55-202ENST00000354291 LYPLA2O95372 231 aa17.39■□□□□ 0.37
DDX55-202ENST00000354291 CEACAM1P13688 526 aa17.39■□□□□ 0.37
DDX55-202ENST00000354291 ATP2B1P20020 1258 aa17.39■□□□□ 0.37
DDX55-202ENST00000354291 ANAPC15P60006 121 aa17.39■□□□□ 0.37
DDX55-202ENST00000354291 SOX4Q06945 474 aaPredicted RBP17.39■□□□□ 0.37
DDX55-202ENST00000354291 ELF2Q15723 593 aa17.39■□□□□ 0.37
DDX55-202ENST00000354291 ARHGAP29Q52LW3 1261 aa17.39■□□□□ 0.37
DDX55-202ENST00000354291 STXBP5Q5T5C0 1151 aa17.39■□□□□ 0.37
DDX55-202ENST00000354291 CDCA2Q69YH5 1023 aaPredicted RBP17.39■□□□□ 0.37
DDX55-202ENST00000354291 RNF19BQ6ZMZ0 732 aa17.39■□□□□ 0.37
DDX55-202ENST00000354291 TMEM209Q96SK2 561 aa17.39■□□□□ 0.37
DDX55-202ENST00000354291 C2orf40Q9H1Z8 148 aa17.39■□□□□ 0.37
DDX55-202ENST00000354291 NUB1Q9Y5A7 615 aa17.39■□□□□ 0.37
DDX55-202ENST00000354291 SYN3O14994 580 aa17.38■□□□□ 0.37
DDX55-202ENST00000354291 CPB1P15086 417 aa17.38■□□□□ 0.37
DDX55-202ENST00000354291 XBP1P17861 261 aa17.38■□□□□ 0.37
DDX55-202ENST00000354291 MRPL58Q14197 206 aaKnown RBP17.38■□□□□ 0.37
DDX55-202ENST00000354291 ANKRD1Q15327 319 aa17.38■□□□□ 0.37
DDX55-202ENST00000354291 UAP1L1Q3KQV9 507 aa17.38■□□□□ 0.37
DDX55-202ENST00000354291 DCAF4L1Q3SXM0 396 aa17.38■□□□□ 0.37
DDX55-202ENST00000354291 PIK3AP1Q6ZUJ8 805 aa17.38■□□□□ 0.37
DDX55-202ENST00000354291 KIF12Q96FN5 646 aa17.38■□□□□ 0.37
DDX55-202ENST00000354291 PCDHA12Q9UN75 941 aa17.38■□□□□ 0.37
DDX55-202ENST00000354291 ATG2BQ96BY7 2078 aa17.38■□□□□ 0.37
DDX55-202ENST00000354291 ITPR1Q14643 2758 aa17.38■□□□□ 0.37
DDX55-202ENST00000354291 LNP1A1A4G5 178 aa17.37■□□□□ 0.37
DDX55-202ENST00000354291 BCLAF3A2AJT9 711 aaKnown RBP17.37■□□□□ 0.37
DDX55-202ENST00000354291 TAF4O00268 1085 aa17.37■□□□□ 0.37
DDX55-202ENST00000354291 EDN1P05305 212 aa17.37■□□□□ 0.37
DDX55-202ENST00000354291 OSTNP61366 133 aa17.37■□□□□ 0.37
DDX55-202ENST00000354291 SCRN1Q12765 414 aa17.37■□□□□ 0.37
DDX55-202ENST00000354291 GRSF1Q12849 480 aaKnown RBP eCLIP17.37■□□□□ 0.37
DDX55-202ENST00000354291 ITPRIPL2Q3MIP1 535 aa17.37■□□□□ 0.37
DDX55-202ENST00000354291 DEPTORQ8TB45 409 aa17.37■□□□□ 0.37
DDX55-202ENST00000354291 HHIPQ96QV1 700 aa17.37■□□□□ 0.37
DDX55-202ENST00000354291 NAP1L4Q99733 375 aaKnown RBP17.37■□□□□ 0.37
DDX55-202ENST00000354291 TMEM9BQ9NQ34 198 aa17.37■□□□□ 0.37
DDX55-202ENST00000354291 LAMA5O15230 3695 aa17.37■□□□□ 0.37
DDX55-202ENST00000354291 PDCD11Q14690 1871 aaKnown RBP17.36■□□□□ 0.37
DDX55-202ENST00000354291 KHNYNO15037 678 aaKnown RBP17.36■□□□□ 0.37
DDX55-202ENST00000354291 HYAL3O43820 417 aaPredicted RBP17.36■□□□□ 0.37
DDX55-202ENST00000354291 PFKFB2O60825 505 aa17.36■□□□□ 0.37
DDX55-202ENST00000354291 CSRP1P21291 193 aaKnown RBP17.36■□□□□ 0.37
DDX55-202ENST00000354291 GBP1P32455 592 aa17.36■□□□□ 0.37
DDX55-202ENST00000354291 YARSP54577 528 aaKnown RBP17.36■□□□□ 0.37
DDX55-202ENST00000354291 EPHB3P54753 998 aa17.36■□□□□ 0.37
DDX55-202ENST00000354291 ZNF280DQ6N043 979 aa17.36■□□□□ 0.37
DDX55-202ENST00000354291 CAMKK1Q8N5S9 505 aa17.36■□□□□ 0.37
DDX55-202ENST00000354291 MCPH1Q8NEM0 835 aa17.36■□□□□ 0.37
DDX55-202ENST00000354291 DEFB124Q8NES8 71 aa17.36■□□□□ 0.37
DDX55-202ENST00000354291 BSNDQ8WZ55 320 aa17.36■□□□□ 0.37
DDX55-202ENST00000354291 PGLYRP2Q96PD5 576 aa17.36■□□□□ 0.37
DDX55-202ENST00000354291 LRRC3Q9BY71 257 aa17.36■□□□□ 0.37
DDX55-202ENST00000354291 ATXN3LQ9H3M9 355 aa17.36■□□□□ 0.37
DDX55-202ENST00000354291 MAFFQ9ULX9 164 aa17.36■□□□□ 0.37
DDX55-202ENST00000354291 INVSQ9Y283 1065 aa17.36■□□□□ 0.37
DDX55-202ENST00000354291 YIPF1Q9Y548 306 aa17.36■□□□□ 0.37
DDX55-202ENST00000354291 FREM2Q5SZK8 3169 aa17.36■□□□□ 0.37
DDX55-202ENST00000354291 LOC400499M0QZD8 3231 aa17.36■□□□□ 0.37
DDX55-202ENST00000354291 ARID2Q68CP9 1835 aa17.35■□□□□ 0.37
DDX55-202ENST00000354291 XRCC6P12956 609 aaKnown RBP eCLIP17.35■□□□□ 0.378e-8■■■□□ 14.6
DDX55-202ENST00000354291 MARCKSP29966 332 aaPredicted RBP17.35■□□□□ 0.37
DDX55-202ENST00000354291 CACNB1Q02641 598 aaPredicted RBP17.35■□□□□ 0.37
DDX55-202ENST00000354291 PTPAQ15257 358 aa17.35■□□□□ 0.37
DDX55-202ENST00000354291 GPR158Q5T848 1215 aa17.35■□□□□ 0.37
DDX55-202ENST00000354291 NT5DC1Q5TFE4 455 aa17.35■□□□□ 0.37
DDX55-202ENST00000354291 ATF7IP2Q5U623 682 aa17.35■□□□□ 0.37
DDX55-202ENST00000354291 FSTL4Q6MZW2 842 aa17.35■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms