RNA–Protein interactions for RNA: ENST00000354268.8

SMARCAD1-201, Transcript of SWI/SNF-related, matrix-associated actin-dependent regulator of chromatin, subfamily a, containing DEAD/H box 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SMARCAD1, Length 4,912 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCAD1-201ENST00000354268 TXNRD1Q16881 649 aa2.41□□□□□ -2.02
SMARCAD1-201ENST00000354268 USP39Q53GS9 565 aaKnown RBP2.41□□□□□ -2.02
SMARCAD1-201ENST00000354268 SOHLH1Q5JUK2 328 aa2.41□□□□□ -2.02
SMARCAD1-201ENST00000354268 ZBTB37Q5TC79 503 aa2.41□□□□□ -2.02
SMARCAD1-201ENST00000354268 AP1ARQ63HQ0 302 aa2.41□□□□□ -2.02
SMARCAD1-201ENST00000354268 ZCCHC8Q6NZY4 707 aaKnown RBP2.41□□□□□ -2.02
SMARCAD1-201ENST00000354268 KCNV1Q6PIU1 500 aa2.41□□□□□ -2.02
SMARCAD1-201ENST00000354268 H1FNTQ75WM6 255 aaPredicted RBP2.41□□□□□ -2.02
SMARCAD1-201ENST00000354268 SATL1Q86VE3 508 aa2.41□□□□□ -2.02
SMARCAD1-201ENST00000354268 GPC2Q8N158 579 aa2.41□□□□□ -2.02
SMARCAD1-201ENST00000354268 ARMC2Q8NEN0 867 aa2.41□□□□□ -2.02
SMARCAD1-201ENST00000354268 PRPF31Q8WWY3 499 aaKnown RBP2.41□□□□□ -2.02
SMARCAD1-201ENST00000354268 SEPT8Q92599 483 aa2.41□□□□□ -2.02
SMARCAD1-201ENST00000354268 LRRC45Q96CN5 670 aa2.41□□□□□ -2.02
SMARCAD1-201ENST00000354268 PPP1R9BQ96SB3 815 aa2.41□□□□□ -2.02
SMARCAD1-201ENST00000354268 MAGEH1Q9H213 219 aa2.41□□□□□ -2.02
SMARCAD1-201ENST00000354268 FBXL7Q9UJT9 491 aa2.41□□□□□ -2.02
SMARCAD1-201ENST00000354268 ARAP1Q96P48 1450 aa2.4□□□□□ -2.02
SMARCAD1-201ENST00000354268 ADCY9O60503 1353 aa2.4□□□□□ -2.02
SMARCAD1-201ENST00000354268 CEMIPQ8WUJ3 1361 aa2.4□□□□□ -2.02
SMARCAD1-201ENST00000354268 TBC1D3DA0A087WVF3 549 aa2.4□□□□□ -2.02
SMARCAD1-201ENST00000354268 TBC1D3IA0A087WXS9 549 aa2.4□□□□□ -2.02
SMARCAD1-201ENST00000354268 TBC1D3EA0A087X179 549 aa2.4□□□□□ -2.02
SMARCAD1-201ENST00000354268 TBC1D3KA0A087X1G2 549 aa2.4□□□□□ -2.02
SMARCAD1-201ENST00000354268 TBC1D3FA6NER0 549 aaPredicted RBP2.4□□□□□ -2.02
SMARCAD1-201ENST00000354268 TBC1D3LB9A6J9 549 aa2.4□□□□□ -2.02
SMARCAD1-201ENST00000354268 H3BML4 177 aa2.4□□□□□ -2.02
SMARCAD1-201ENST00000354268 TSPAN3O60637 253 aa2.4□□□□□ -2.02
SMARCAD1-201ENST00000354268 CNTN5O94779 1100 aa2.4□□□□□ -2.02
SMARCAD1-201ENST00000354268 EFEMP2O95967 443 aa2.4□□□□□ -2.02
SMARCAD1-201ENST00000354268 TBC1D3HP0C7X1 549 aa2.4□□□□□ -2.02
SMARCAD1-201ENST00000354268 INSRRP14616 1297 aa2.4□□□□□ -2.02
SMARCAD1-201ENST00000354268 CSTF2P33240 577 aaKnown RBP eCLIP2.4□□□□□ -2.02
SMARCAD1-201ENST00000354268 SLC6A9P48067 706 aa2.4□□□□□ -2.02
SMARCAD1-201ENST00000354268 CXCR3P49682 368 aa2.4□□□□□ -2.02
SMARCAD1-201ENST00000354268 PPATQ06203 517 aa2.4□□□□□ -2.02
SMARCAD1-201ENST00000354268 PRPF4BQ13523 1007 aaKnown RBP2.4□□□□□ -2.02
SMARCAD1-201ENST00000354268 NEUROD1Q13562 356 aa2.4□□□□□ -2.02
SMARCAD1-201ENST00000354268 PTK2BQ14289 1009 aa2.4□□□□□ -2.02
SMARCAD1-201ENST00000354268 MPEG1Q2M385 716 aa2.4□□□□□ -2.02
SMARCAD1-201ENST00000354268 PTCHD3Q3KNS1 767 aa2.4□□□□□ -2.02
SMARCAD1-201ENST00000354268 RTP2Q5QGT7 225 aa2.4□□□□□ -2.02
SMARCAD1-201ENST00000354268 TBC1D3GQ6DHY5 549 aa2.4□□□□□ -2.02
SMARCAD1-201ENST00000354268 TBC1D3CQ6IPX1 549 aa2.4□□□□□ -2.02
SMARCAD1-201ENST00000354268 ZCCHC12Q6PEW1 402 aa2.4□□□□□ -2.02
SMARCAD1-201ENST00000354268 C1orf229Q6ZS94 237 aaPredicted RBP2.4□□□□□ -2.02
SMARCAD1-201ENST00000354268 FTSJ3Q8IY81 847 aaKnown RBP2.4□□□□□ -2.02
SMARCAD1-201ENST00000354268 TBC1D3Q8IZP1 549 aaPredicted RBP2.4□□□□□ -2.02
SMARCAD1-201ENST00000354268 TMC1Q8TDI8 760 aa2.4□□□□□ -2.02
SMARCAD1-201ENST00000354268 DPH3Q96FX2 82 aa2.4□□□□□ -2.02
SMARCAD1-201ENST00000354268 TRIM7Q9C029 511 aa2.4□□□□□ -2.02
SMARCAD1-201ENST00000354268 ING2Q9H160 280 aa2.4□□□□□ -2.02
SMARCAD1-201ENST00000354268 ELP3Q9H9T3 547 aa2.4□□□□□ -2.02
SMARCAD1-201ENST00000354268 MKS1Q9NXB0 559 aa2.4□□□□□ -2.02
SMARCAD1-201ENST00000354268 UTP6Q9NYH9 597 aaKnown RBP2.4□□□□□ -2.02
SMARCAD1-201ENST00000354268 NOL7Q9UMY1 257 aaKnown RBP2.4□□□□□ -2.02
SMARCAD1-201ENST00000354268 SNX8Q9Y5X2 465 aa2.4□□□□□ -2.02
SMARCAD1-201ENST00000354268 SYNMO15061 1565 aa2.4□□□□□ -2.02
SMARCAD1-201ENST00000354268 METTL12A8MUP2 240 aa2.4□□□□□ -2.03
SMARCAD1-201ENST00000354268 MSH4O15457 936 aa2.4□□□□□ -2.03
SMARCAD1-201ENST00000354268 GFPT2O94808 682 aa2.4□□□□□ -2.03
SMARCAD1-201ENST00000354268 ATP1A3P13637 1013 aa2.4□□□□□ -2.03
SMARCAD1-201ENST00000354268 NPR1P16066 1061 aa2.4□□□□□ -2.03
SMARCAD1-201ENST00000354268 GNL2Q13823 731 aaKnown RBP2.4□□□□□ -2.03
SMARCAD1-201ENST00000354268 UBE3CQ15386 1083 aa2.4□□□□□ -2.03
SMARCAD1-201ENST00000354268 UBXN11Q5T124 520 aa2.4□□□□□ -2.03
SMARCAD1-201ENST00000354268 PSAPL1Q6NUJ1 521 aa2.4□□□□□ -2.03
SMARCAD1-201ENST00000354268 TAF2Q6P1X5 1199 aa2.4□□□□□ -2.03
SMARCAD1-201ENST00000354268 NFRKBQ6P4R8 1299 aa2.4□□□□□ -2.03
SMARCAD1-201ENST00000354268 UNQ9370/PRO34162Q6UXP9 181 aa2.4□□□□□ -2.03
SMARCAD1-201ENST00000354268 CHSY3Q70JA7 882 aa2.4□□□□□ -2.03
SMARCAD1-201ENST00000354268 PDZD4Q76G19 769 aaPredicted RBP2.4□□□□□ -2.03
SMARCAD1-201ENST00000354268 ADAMTS15Q8TE58 950 aa2.4□□□□□ -2.03
SMARCAD1-201ENST00000354268 NSUN6Q8TEA1 469 aaKnown RBP2.4□□□□□ -2.03
SMARCAD1-201ENST00000354268 DCAF11Q8TEB1 546 aa2.4□□□□□ -2.03
SMARCAD1-201ENST00000354268 BSNDQ8WZ55 320 aa2.4□□□□□ -2.03
SMARCAD1-201ENST00000354268 SYT3Q9BQG1 590 aa2.4□□□□□ -2.03
SMARCAD1-201ENST00000354268 KANSL3Q9P2N6 904 aa2.4□□□□□ -2.03
SMARCAD1-201ENST00000354268 IP6K2Q9UHH9 426 aa2.4□□□□□ -2.03
SMARCAD1-201ENST00000354268 PFDN2Q9UHV9 154 aa2.4□□□□□ -2.03
SMARCAD1-201ENST00000354268 HFM1A2PYH4 1435 aa2.4□□□□□ -2.03
SMARCAD1-201ENST00000354268 NSD2O96028 1365 aa2.4□□□□□ -2.03
SMARCAD1-201ENST00000354268 FMN1Q68DA7 1419 aa2.4□□□□□ -2.03
SMARCAD1-201ENST00000354268 TRIM64CA6NLI5 447 aa2.4□□□□□ -2.03
SMARCAD1-201ENST00000354268 H7C0S8 307 aa2.4□□□□□ -2.03
SMARCAD1-201ENST00000354268 CER1O95813 267 aa2.4□□□□□ -2.03
SMARCAD1-201ENST00000354268 TBX18O95935 607 aa2.4□□□□□ -2.03
SMARCAD1-201ENST00000354268 ONECUT2O95948 504 aa2.4□□□□□ -2.03
SMARCAD1-201ENST00000354268 RB1P06400 928 aa2.4□□□□□ -2.03
SMARCAD1-201ENST00000354268 ITGAXP20702 1163 aa2.4□□□□□ -2.03
SMARCAD1-201ENST00000354268 PPP2R1BP30154 601 aa2.4□□□□□ -2.03
SMARCAD1-201ENST00000354268 TNNT3P45378 269 aaPredicted RBP2.4□□□□□ -2.03
SMARCAD1-201ENST00000354268 NEK4P51957 841 aa2.4□□□□□ -2.03
SMARCAD1-201ENST00000354268 ADKP55263 362 aaKnown RBP2.4□□□□□ -2.03
SMARCAD1-201ENST00000354268 EEF1A1P68104 462 aaKnown RBP2.4□□□□□ -2.03
SMARCAD1-201ENST00000354268 CBX1P83916 185 aa2.4□□□□□ -2.03
SMARCAD1-201ENST00000354268 TEKQ02763 1124 aa2.4□□□□□ -2.03
SMARCAD1-201ENST00000354268 EEF1A2Q05639 463 aaKnown RBP2.4□□□□□ -2.03
SMARCAD1-201ENST00000354268 G3BP1Q13283 466 aaKnown RBP eCLIP2.4□□□□□ -2.03
SMARCAD1-201ENST00000354268 OS9Q13438 667 aaPredicted RBP2.4□□□□□ -2.03
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms