RNA–Protein interactions for RNA: ENST00000354071.7

BRCA1-202, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best) BASIC

Gene BRCA1, Length 4,497 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-202ENST00000354071 LAMB2P55268 1798 aa1.91□□□□□ -2.1
BRCA1-202ENST00000354071 A0A1W2PPH5 198 aa1.91□□□□□ -2.1
BRCA1-202ENST00000354071 HMGB1P1B2RPK0 211 aaPredicted RBP1.91□□□□□ -2.1
BRCA1-202ENST00000354071 GPR32O75388 356 aa1.91□□□□□ -2.1
BRCA1-202ENST00000354071 CKBP12277 381 aa1.91□□□□□ -2.1
BRCA1-202ENST00000354071 GATA4P43694 442 aa1.91□□□□□ -2.1
BRCA1-202ENST00000354071 UCP3P55916 312 aa1.91□□□□□ -2.1
BRCA1-202ENST00000354071 CORO7P57737 925 aa1.91□□□□□ -2.1
BRCA1-202ENST00000354071 ADAM15Q13444 863 aa1.91□□□□□ -2.1
BRCA1-202ENST00000354071 PLEKHN1Q494U1 663 aaPredicted RBP1.91□□□□□ -2.1
BRCA1-202ENST00000354071 ADGRF1Q5T601 910 aa1.91□□□□□ -2.1
BRCA1-202ENST00000354071 C2CD5Q86YS7 1000 aa1.91□□□□□ -2.1
BRCA1-202ENST00000354071 ANKRD18AQ8IVF6 992 aa1.91□□□□□ -2.1
BRCA1-202ENST00000354071 HERC6Q8IVU3 1022 aa1.91□□□□□ -2.1
BRCA1-202ENST00000354071 GLB1L2Q8IW92 636 aa1.91□□□□□ -2.1
BRCA1-202ENST00000354071 TRMT2AQ8IZ69 625 aaKnown RBP1.91□□□□□ -2.1
BRCA1-202ENST00000354071 OR8H2Q8N162 312 aa1.91□□□□□ -2.1
BRCA1-202ENST00000354071 NSUN7Q8NE18 718 aaKnown RBP1.91□□□□□ -2.1
BRCA1-202ENST00000354071 CPT1CQ8TCG5 803 aa1.91□□□□□ -2.1
BRCA1-202ENST00000354071 TBATAQ96M53 351 aa1.91□□□□□ -2.1
BRCA1-202ENST00000354071 UHRF1Q96T88 793 aaPredicted RBP1.91□□□□□ -2.1
BRCA1-202ENST00000354071 USP44Q9H0E7 712 aa1.91□□□□□ -2.1
BRCA1-202ENST00000354071 PRKRIP1Q9H875 184 aaPredicted RBP1.91□□□□□ -2.1
BRCA1-202ENST00000354071 VSX1Q9NZR4 365 aaPredicted RBP1.91□□□□□ -2.1
BRCA1-202ENST00000354071 AASSQ9UDR5 926 aa1.91□□□□□ -2.1
BRCA1-202ENST00000354071 PGAP2Q9UHJ9 254 aa1.91□□□□□ -2.1
BRCA1-202ENST00000354071 MID2Q9UJV3 735 aa1.91□□□□□ -2.1
BRCA1-202ENST00000354071 DBR1Q9UK59 544 aaKnown RBP1.91□□□□□ -2.1
BRCA1-202ENST00000354071 YTHDC2Q9H6S0 1430 aaKnown RBP1.91□□□□□ -2.1
BRCA1-202ENST00000354071 TRIM43BA6NCK2 446 aa1.91□□□□□ -2.1
BRCA1-202ENST00000354071 RAB27BO00194 218 aa1.91□□□□□ -2.1
BRCA1-202ENST00000354071 SYT5O00445 386 aa1.91□□□□□ -2.1
BRCA1-202ENST00000354071 HYAL3O43820 417 aaPredicted RBP1.91□□□□□ -2.1
BRCA1-202ENST00000354071 MAFKO60675 156 aa1.91□□□□□ -2.1
BRCA1-202ENST00000354071 UNC5CO95185 931 aa1.91□□□□□ -2.1
BRCA1-202ENST00000354071 C8BP07358 591 aa1.91□□□□□ -2.1
BRCA1-202ENST00000354071 RARBP10826 455 aa1.91□□□□□ -2.1
BRCA1-202ENST00000354071 RXRAP19793 462 aa1.91□□□□□ -2.1
BRCA1-202ENST00000354071 ECHS1P30084 290 aa1.91□□□□□ -2.1
BRCA1-202ENST00000354071 GUCY1A2P33402 732 aa1.91□□□□□ -2.1
BRCA1-202ENST00000354071 PER3P56645 1201 aa1.91□□□□□ -2.1
BRCA1-202ENST00000354071 KRT32Q14532 448 aa1.91□□□□□ -2.1
BRCA1-202ENST00000354071 LRRC24Q50LG9 513 aa1.91□□□□□ -2.1
BRCA1-202ENST00000354071 FYB2Q5VWT5 728 aa1.91□□□□□ -2.1
BRCA1-202ENST00000354071 AFMIDQ63HM1 303 aa1.91□□□□□ -2.1
BRCA1-202ENST00000354071 FAM205BPQ63HN1 556 aa1.91□□□□□ -2.1
BRCA1-202ENST00000354071 FBXO38Q6PIJ6 1188 aa1.91□□□□□ -2.1
BRCA1-202ENST00000354071 SLC22A25Q6T423 547 aa1.91□□□□□ -2.1
BRCA1-202ENST00000354071 FAM43BQ6ZT52 329 aaPredicted RBP1.91□□□□□ -2.1
BRCA1-202ENST00000354071 OTOP2Q7RTS6 562 aa1.91□□□□□ -2.1
BRCA1-202ENST00000354071 CHD1LQ86WJ1 897 aa1.91□□□□□ -2.1
BRCA1-202ENST00000354071 ZNF280BQ86YH2 543 aa1.91□□□□□ -2.1
BRCA1-202ENST00000354071 GALNT15Q8N3T1 639 aa1.91□□□□□ -2.1
BRCA1-202ENST00000354071 PHOSPHO1Q8TCT1 267 aa1.91□□□□□ -2.1
BRCA1-202ENST00000354071 BCL7CQ8WUZ0 217 aaPredicted RBP1.91□□□□□ -2.1
BRCA1-202ENST00000354071 AFG1LQ8WV93 481 aa1.91□□□□□ -2.1
BRCA1-202ENST00000354071 BRI3BPQ8WY22 251 aa1.91□□□□□ -2.1
BRCA1-202ENST00000354071 ZUFSPQ96AP4 578 aa1.91□□□□□ -2.1
BRCA1-202ENST00000354071 TRIM43Q96BQ3 446 aaPredicted RBP1.91□□□□□ -2.1
BRCA1-202ENST00000354071 MSLNLQ96KJ4 702 aa1.91□□□□□ -2.1
BRCA1-202ENST00000354071 PTPN18Q99952 460 aa1.91□□□□□ -2.1
BRCA1-202ENST00000354071 OSBPL6Q9BZF3 934 aa1.91□□□□□ -2.1
BRCA1-202ENST00000354071 RNF32Q9H0A6 362 aa1.91□□□□□ -2.1
BRCA1-202ENST00000354071 PAK6Q9NQU5 681 aaPredicted RBP1.91□□□□□ -2.1
BRCA1-202ENST00000354071 FEZ2Q9UHY8 353 aaPredicted RBP1.91□□□□□ -2.1
BRCA1-202ENST00000354071 HS3ST4Q9Y661 456 aa1.91□□□□□ -2.1
BRCA1-202ENST00000354071 RREB1Q92766 1687 aa1.91□□□□□ -2.1
BRCA1-202ENST00000354071 B4E171 279 aa1.91□□□□□ -2.1
BRCA1-202ENST00000354071 PYCARD-AS1I3L0S3 204 aa1.91□□□□□ -2.1
BRCA1-202ENST00000354071 GRM6O15303 877 aa1.91□□□□□ -2.1
BRCA1-202ENST00000354071 DOK2O60496 412 aa1.91□□□□□ -2.1
BRCA1-202ENST00000354071 KLHL18O94889 574 aa1.91□□□□□ -2.1
BRCA1-202ENST00000354071 PRSS23O95084 383 aa1.91□□□□□ -2.1
BRCA1-202ENST00000354071 GLI1P08151 1106 aa1.91□□□□□ -2.1
BRCA1-202ENST00000354071 FBLN1P23142 703 aa1.91□□□□□ -2.1
BRCA1-202ENST00000354071 APEX1P27695 318 aaKnown RBP1.91□□□□□ -2.1
BRCA1-202ENST00000354071 TSPAN7P41732 249 aa1.91□□□□□ -2.1
BRCA1-202ENST00000354071 KIR2DL1P43626 348 aaPredicted RBP1.91□□□□□ -2.1
BRCA1-202ENST00000354071 KIR2DL2P43627 348 aaPredicted RBP1.91□□□□□ -2.1
BRCA1-202ENST00000354071 KCNJ5P48544 419 aa1.91□□□□□ -2.1
BRCA1-202ENST00000354071 PDCLQ13371 301 aa1.91□□□□□ -2.1
BRCA1-202ENST00000354071 BOP1Q14137 746 aaKnown RBP1.91□□□□□ -2.1
BRCA1-202ENST00000354071 ATP2B3Q16720 1220 aa1.91□□□□□ -2.1
BRCA1-202ENST00000354071 CNKSR3Q6P9H4 555 aa1.91□□□□□ -2.1
BRCA1-202ENST00000354071 LARP4Q71RC2 724 aaKnown RBP eCLIP1.91□□□□□ -2.1
BRCA1-202ENST00000354071 MED25Q71SY5 747 aa1.91□□□□□ -2.1
BRCA1-202ENST00000354071 RNF44Q7L0R7 432 aa1.91□□□□□ -2.1
BRCA1-202ENST00000354071 SLC30A5Q8TAD4 765 aa1.91□□□□□ -2.1
BRCA1-202ENST00000354071 TRAPPC12Q8WVT3 735 aa1.91□□□□□ -2.1
BRCA1-202ENST00000354071 HERVK_113Q902F9 699 aa1.91□□□□□ -2.1
BRCA1-202ENST00000354071 MTFMTQ96DP5 389 aaKnown RBP1.91□□□□□ -2.1
BRCA1-202ENST00000354071 TOE1Q96GM8 510 aaKnown RBP1.91□□□□□ -2.1
BRCA1-202ENST00000354071 HIST1H2AHQ96KK5 128 aa1.91□□□□□ -2.1
BRCA1-202ENST00000354071 HIST1H2AJQ99878 128 aa1.91□□□□□ -2.1
BRCA1-202ENST00000354071 SPON1Q9HCB6 807 aa1.91□□□□□ -2.1
BRCA1-202ENST00000354071 KCND1Q9NSA2 647 aa1.91□□□□□ -2.1
BRCA1-202ENST00000354071 PIH1D1Q9NWS0 290 aaKnown RBP1.91□□□□□ -2.1
BRCA1-202ENST00000354071 KCMF1Q9P0J7 381 aa1.91□□□□□ -2.1
BRCA1-202ENST00000354071 CCDC39Q9UFE4 941 aa1.91□□□□□ -2.1
BRCA1-202ENST00000354071 ASAP1Q9ULH1 1129 aa1.91□□□□□ -2.1
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms