RNA–Protein interactions for RNA: ENST00000353909.7

MBD1-205, Transcript of methyl-CpG binding domain protein 1, humanhuman

TSL 1 (best) BASIC

Gene MBD1, Length 2,820 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MBD1-205ENST00000353909 ATG4AQ8WYN0 398 aa16.57■□□□□ 0.24
MBD1-205ENST00000353909 TFAP2BQ92481 460 aa16.57■□□□□ 0.24
MBD1-205ENST00000353909 XYLT2Q9H1B5 865 aa16.57■□□□□ 0.24
MBD1-205ENST00000353909 POLIQ9UNA4 740 aa16.57■□□□□ 0.24
MBD1-205ENST00000353909 CCL15-CCL14A0A0B4J2E2 113 aa16.57■□□□□ 0.24
MBD1-205ENST00000353909 TCF4P15884 667 aa16.57■□□□□ 0.24
MBD1-205ENST00000353909 RAP1GAPP47736 663 aa16.57■□□□□ 0.24
MBD1-205ENST00000353909 ORC1Q13415 861 aa16.57■□□□□ 0.24
MBD1-205ENST00000353909 CCL15Q16663 113 aa16.57■□□□□ 0.24
MBD1-205ENST00000353909 ZDHHC24Q6UX98 284 aa16.57■□□□□ 0.24
MBD1-205ENST00000353909 ANKS1BQ7Z6G8 1248 aa16.57■□□□□ 0.24
MBD1-205ENST00000353909 CPB2Q96IY4 423 aa16.57■□□□□ 0.24
MBD1-205ENST00000353909 C2orf40Q9H1Z8 148 aa16.57■□□□□ 0.24
MBD1-205ENST00000353909 RABEP2Q9H5N1 569 aa16.57■□□□□ 0.24
MBD1-205ENST00000353909 FAM114A2Q9NRY5 505 aa16.57■□□□□ 0.24
MBD1-205ENST00000353909 NXF1Q9UBU9 619 aaKnown RBP16.57■□□□□ 0.24
MBD1-205ENST00000353909 ATP8A1Q9Y2Q0 1164 aa16.57■□□□□ 0.24
MBD1-205ENST00000353909 PPME1Q9Y570 386 aa16.57■□□□□ 0.24
MBD1-205ENST00000353909 CHRNA3P32297 505 aa16.56■□□□□ 0.24
MBD1-205ENST00000353909 RPL21P46778 160 aaKnown RBP16.56■□□□□ 0.24
MBD1-205ENST00000353909 SLC26A2P50443 739 aa16.56■□□□□ 0.24
MBD1-205ENST00000353909 ATP1A2P50993 1020 aa16.56■□□□□ 0.24
MBD1-205ENST00000353909 SNX1Q13596 522 aa16.56■□□□□ 0.24
MBD1-205ENST00000353909 C1orf131Q8NDD1 294 aaKnown RBP16.56■□□□□ 0.24
MBD1-205ENST00000353909 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP16.56■□□□□ 0.24
MBD1-205ENST00000353909 FAM118BQ9BPY3 351 aa16.56■□□□□ 0.24
MBD1-205ENST00000353909 RAB17Q9H0T7 212 aa16.56■□□□□ 0.24
MBD1-205ENST00000353909 CENPHQ9H3R5 247 aa16.56■□□□□ 0.24
MBD1-205ENST00000353909 GRHL1Q9NZI5 618 aa16.56■□□□□ 0.24
MBD1-205ENST00000353909 USTQ9Y2C2 406 aa16.56■□□□□ 0.24
MBD1-205ENST00000353909 SNAI1O95863 264 aaPredicted RBP16.56■□□□□ 0.24
MBD1-205ENST00000353909 NFICP08651 508 aa16.56■□□□□ 0.24
MBD1-205ENST00000353909 TMEM191BP0C7N4 346 aa16.56■□□□□ 0.24
MBD1-205ENST00000353909 ASPAP45381 313 aa16.56■□□□□ 0.24
MBD1-205ENST00000353909 TRPC3Q13507 836 aa16.56■□□□□ 0.24
MBD1-205ENST00000353909 DHX34Q14147 1143 aaKnown RBP16.56■□□□□ 0.24
MBD1-205ENST00000353909 SKIDA1Q1XH10 827 aa16.56■□□□□ 0.24
MBD1-205ENST00000353909 LRRC31Q6UY01 552 aa16.56■□□□□ 0.24
MBD1-205ENST00000353909 DDX27Q96GQ7 796 aaKnown RBP16.56■□□□□ 0.24
MBD1-205ENST00000353909 FMO2Q99518 471 aa16.56■□□□□ 0.24
MBD1-205ENST00000353909 HEMGNQ9BXL5 484 aa16.56■□□□□ 0.24
MBD1-205ENST00000353909 NIF3L1Q9GZT8 377 aa16.56■□□□□ 0.24
MBD1-205ENST00000353909 KATNBL1Q9H079 304 aa16.56■□□□□ 0.24
MBD1-205ENST00000353909 PCYOX1Q9UHG3 505 aa16.56■□□□□ 0.24
MBD1-205ENST00000353909 ITGBL1O95965 494 aaPredicted RBP16.55■□□□□ 0.24
MBD1-205ENST00000353909 KRT19P08727 400 aa16.55■□□□□ 0.24
MBD1-205ENST00000353909 GJC1P36383 396 aa16.55■□□□□ 0.24
MBD1-205ENST00000353909 COILP38432 576 aaPredicted RBP16.55■□□□□ 0.24
MBD1-205ENST00000353909 CDH8P55286 799 aa16.55■□□□□ 0.24
MBD1-205ENST00000353909 ATP13A4Q4VNC1 1196 aa16.55■□□□□ 0.24
MBD1-205ENST00000353909 CCDC105Q8IYK2 499 aa16.55■□□□□ 0.24
MBD1-205ENST00000353909 CHST7Q9NS84 486 aa16.55■□□□□ 0.24
MBD1-205ENST00000353909 CDKN2AIPQ9NXV6 580 aaPredicted RBP16.55■□□□□ 0.24
MBD1-205ENST00000353909 PNMA3Q9UL41 463 aa16.55■□□□□ 0.24
MBD1-205ENST00000353909 PLXNB2O15031 1838 aa16.55■□□□□ 0.24
MBD1-205ENST00000353909 DOCK3Q8IZD9 2030 aa16.55■□□□□ 0.24
MBD1-205ENST00000353909 PROSCO94903 275 aa16.55■□□□□ 0.24
MBD1-205ENST00000353909 MYBL1P10243 752 aa16.55■□□□□ 0.24
MBD1-205ENST00000353909 ZNF844Q08AG5 666 aa16.55■□□□□ 0.24
MBD1-205ENST00000353909 TFDP1Q14186 410 aa16.55■□□□□ 0.24
MBD1-205ENST00000353909 AMHR2Q16671 573 aa16.55■□□□□ 0.24
MBD1-205ENST00000353909 SGSM1Q2NKQ1 1148 aa16.55■□□□□ 0.24
MBD1-205ENST00000353909 ZNF699Q32M78 642 aa16.55■□□□□ 0.24
MBD1-205ENST00000353909 PLEKHA7Q6IQ23 1121 aa16.55■□□□□ 0.24
MBD1-205ENST00000353909 PHF13Q86YI8 300 aaPredicted RBP16.55■□□□□ 0.24
MBD1-205ENST00000353909 WDTC1Q8N5D0 677 aa16.55■□□□□ 0.24
MBD1-205ENST00000353909 LRRC45Q96CN5 670 aa16.55■□□□□ 0.24
MBD1-205ENST00000353909 C16orf70Q9BSU1 422 aa16.55■□□□□ 0.24
MBD1-205ENST00000353909 KLHL11Q9NVR0 708 aa16.55■□□□□ 0.24
MBD1-205ENST00000353909 SIX4Q9UIU6 781 aa16.55■□□□□ 0.24
MBD1-205ENST00000353909 AKT3Q9Y243 479 aa16.55■□□□□ 0.24
MBD1-205ENST00000353909 TLR3O15455 904 aaKnown RBP16.55■□□□□ 0.24
MBD1-205ENST00000353909 ADCY6O43306 1168 aa16.55■□□□□ 0.24
MBD1-205ENST00000353909 MMP8P22894 467 aa16.55■□□□□ 0.24
MBD1-205ENST00000353909 GRM1Q13255 1194 aa16.55■□□□□ 0.24
MBD1-205ENST00000353909 LAMC2Q13753 1193 aa16.55■□□□□ 0.24
MBD1-205ENST00000353909 CYP1B1Q16678 543 aa16.55■□□□□ 0.24
MBD1-205ENST00000353909 CD302Q8IX05 232 aa16.55■□□□□ 0.24
MBD1-205ENST00000353909 TJP2Q9UDY2 1190 aa16.55■□□□□ 0.24
MBD1-205ENST00000353909 R3HDM2Q9Y2K5 976 aaKnown RBP16.55■□□□□ 0.24
MBD1-205ENST00000353909 FAM187AA6NFU0 413 aa16.54■□□□□ 0.24
MBD1-205ENST00000353909 FSCN2O14926 492 aa16.54■□□□□ 0.24
MBD1-205ENST00000353909 HSPA6P17066 643 aa16.54■□□□□ 0.24
MBD1-205ENST00000353909 PPP2R5EQ16537 467 aa16.54■□□□□ 0.24
MBD1-205ENST00000353909 C1orf127Q8N9H9 656 aa16.54■□□□□ 0.24
MBD1-205ENST00000353909 TXLNGYQ9BZA5 131 aa16.54■□□□□ 0.24
MBD1-205ENST00000353909 TNFSF13BQ9Y275 285 aa16.54■□□□□ 0.24
MBD1-205ENST00000353909 GH1P01241 217 aa16.54■□□□□ 0.24
MBD1-205ENST00000353909 AP3M2P53677 418 aa16.54■□□□□ 0.24
MBD1-205ENST00000353909 TRIM72Q6ZMU5 477 aa16.54■□□□□ 0.24
MBD1-205ENST00000353909 EXOC8Q8IYI6 725 aa16.54■□□□□ 0.24
MBD1-205ENST00000353909 TRIM11Q96F44 468 aa16.54■□□□□ 0.24
MBD1-205ENST00000353909 JPH2Q9BR39 696 aaPredicted RBP16.54■□□□□ 0.24
MBD1-205ENST00000353909 EPB41L4BQ9H329 900 aa16.54■□□□□ 0.24
MBD1-205ENST00000353909 SLTMQ9NWH9 1034 aaKnown RBP eCLIP16.54■□□□□ 0.242e-6■■■■■ 27.2
MBD1-205ENST00000353909 LACTBL1A8MY62 500 aa16.53■□□□□ 0.24
MBD1-205ENST00000353909 B4GALT4O60513 344 aa16.53■□□□□ 0.24
MBD1-205ENST00000353909 STAG3L1P0CL83 205 aa16.53■□□□□ 0.24
MBD1-205ENST00000353909 FGFR4P22455 802 aa16.53■□□□□ 0.24
MBD1-205ENST00000353909 SSR1P43307 286 aaKnown RBP16.53■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 61.8 ms