RNA–Protein interactions for RNA: ENST00000353047.10

CTSB-202, Transcript of cathepsin B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTSB, Length 3,875 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSB-202ENST00000353047 ADAM7Q9H2U9 754 aa19.06■□□□□ 0.64
CTSB-202ENST00000353047 MRPL47Q9HD33 250 aaKnown RBP19.06■□□□□ 0.64
CTSB-202ENST00000353047 CAPN9O14815 690 aa19.06■□□□□ 0.64
CTSB-202ENST00000353047 KIF1CO43896 1103 aaKnown RBP19.06■□□□□ 0.64
CTSB-202ENST00000353047 NFX1Q12986 1120 aaKnown RBP19.06■□□□□ 0.64
CTSB-202ENST00000353047 PDIK1LQ8N165 341 aa19.06■□□□□ 0.64
CTSB-202ENST00000353047 CKAP2Q8WWK9 683 aa19.06■□□□□ 0.64
CTSB-202ENST00000353047 RPS6KC1Q96S38 1066 aa19.06■□□□□ 0.64
CTSB-202ENST00000353047 MXRA8Q9BRK3 442 aa19.06■□□□□ 0.64
CTSB-202ENST00000353047 RBAKQ9NYW8 714 aaPredicted RBP19.06■□□□□ 0.64
CTSB-202ENST00000353047 NKX1-2Q9UD57 310 aaPredicted RBP19.06■□□□□ 0.64
CTSB-202ENST00000353047 LRP6O75581 1613 aa19.06■□□□□ 0.64
CTSB-202ENST00000353047 POLRMTO00411 1230 aaKnown RBP19.05■□□□□ 0.64
CTSB-202ENST00000353047 CST8O60676 142 aa19.05■□□□□ 0.64
CTSB-202ENST00000353047 PSMD10O75832 226 aa19.05■□□□□ 0.64
CTSB-202ENST00000353047 DCTN3O75935 186 aa19.05■□□□□ 0.64
CTSB-202ENST00000353047 TCF4P15884 667 aa19.05■□□□□ 0.64
CTSB-202ENST00000353047 STAT4Q14765 748 aa19.05■□□□□ 0.64
CTSB-202ENST00000353047 HYIQ5T013 277 aa19.05■□□□□ 0.64
CTSB-202ENST00000353047 SEPT12Q8IYM1 358 aa19.05■□□□□ 0.64
CTSB-202ENST00000353047 PLEKHO2Q8TD55 490 aa19.05■□□□□ 0.64
CTSB-202ENST00000353047 ART4Q93070 314 aa19.05■□□□□ 0.64
CTSB-202ENST00000353047 HERPUD2Q9BSE4 406 aa19.05■□□□□ 0.64
CTSB-202ENST00000353047 TBC1D10AQ9BXI6 508 aa19.05■□□□□ 0.64
CTSB-202ENST00000353047 ROPN1BQ9BZX4 212 aaPredicted RBP19.05■□□□□ 0.64
CTSB-202ENST00000353047 ROPN1Q9HAT0 212 aaPredicted RBP19.05■□□□□ 0.64
CTSB-202ENST00000353047 NGRNQ9NPE2 291 aaKnown RBP19.05■□□□□ 0.64
CTSB-202ENST00000353047 TBX20Q9UMR3 447 aa19.05■□□□□ 0.64
CTSB-202ENST00000353047 TTLL3Q9Y4R7 772 aa19.05■□□□□ 0.64
CTSB-202ENST00000353047 CHD4Q14839 1912 aa19.05■□□□□ 0.64
CTSB-202ENST00000353047 TJP3O95049 919 aa19.05■□□□□ 0.64
CTSB-202ENST00000353047 GTF2H1P32780 548 aa19.05■□□□□ 0.64
CTSB-202ENST00000353047 MAN1A1P33908 653 aa19.05■□□□□ 0.64
CTSB-202ENST00000353047 RPS6P62753 249 aaKnown RBP19.05■□□□□ 0.64
CTSB-202ENST00000353047 THOC5Q13769 683 aaKnown RBP19.05■□□□□ 0.64
CTSB-202ENST00000353047 EML3Q32P44 896 aa19.05■□□□□ 0.64
CTSB-202ENST00000353047 SLC27A3Q5K4L6 730 aa19.05■□□□□ 0.64
CTSB-202ENST00000353047 SP8Q8IXZ3 490 aa19.05■□□□□ 0.64
CTSB-202ENST00000353047 RBBP8NLQ8NC74 664 aaPredicted RBP19.05■□□□□ 0.64
CTSB-202ENST00000353047 DNAJC9Q8WXX5 260 aa19.05■□□□□ 0.64
CTSB-202ENST00000353047 VCXQ9H320 206 aa19.05■□□□□ 0.64
CTSB-202ENST00000353047 IVNS1ABPQ9Y6Y0 642 aa19.05■□□□□ 0.64
CTSB-202ENST00000353047 CLGNO14967 610 aa19.05■□□□□ 0.64
CTSB-202ENST00000353047 PHBP35232 272 aa19.05■□□□□ 0.64
CTSB-202ENST00000353047 THTPAQ9BU02 230 aa19.05■□□□□ 0.64
CTSB-202ENST00000353047 TRIM4Q9C037 500 aa19.05■□□□□ 0.64
CTSB-202ENST00000353047 POLR3FQ9H1D9 316 aaPredicted RBP19.05■□□□□ 0.64
CTSB-202ENST00000353047 GAKO14976 1311 aa19.05■□□□□ 0.64
CTSB-202ENST00000353047 LOC100653049A0A140TA62 436 aa19.04■□□□□ 0.64
CTSB-202ENST00000353047 CCDC78A2IDD5 438 aa19.04■□□□□ 0.64
CTSB-202ENST00000353047 BTNL10A8MVZ5 291 aa19.04■□□□□ 0.64
CTSB-202ENST00000353047 KRT34O76011 436 aa19.04■□□□□ 0.64
CTSB-202ENST00000353047 SH3BP5LQ7L8J4 393 aa19.04■□□□□ 0.64
CTSB-202ENST00000353047 PARD3BQ8TEW8 1205 aa19.04■□□□□ 0.64
CTSB-202ENST00000353047 EPB41L4BQ9H329 900 aa19.04■□□□□ 0.64
CTSB-202ENST00000353047 SEPT10Q9P0V9 454 aa19.04■□□□□ 0.64
CTSB-202ENST00000353047 PCYOX1Q9UHG3 505 aa19.04■□□□□ 0.64
CTSB-202ENST00000353047 PKD1L3Q7Z443 1732 aa19.04■□□□□ 0.64
CTSB-202ENST00000353047 PDE4DIPQ5VU43 2346 aa19.04■□□□□ 0.64
CTSB-202ENST00000353047 RFC5P40937 340 aa19.04■□□□□ 0.64
CTSB-202ENST00000353047 BMPR2Q13873 1038 aa19.04■□□□□ 0.64
CTSB-202ENST00000353047 C3orf20Q8ND61 904 aa19.04■□□□□ 0.64
CTSB-202ENST00000353047 MYH3P11055 1940 aa19.04■□□□□ 0.64
CTSB-202ENST00000353047 INO80B-WBP1J3KQ70 363 aa19.04■□□□□ 0.64
CTSB-202ENST00000353047 LUC7L3O95232 432 aaKnown RBP19.04■□□□□ 0.64
CTSB-202ENST00000353047 GAD2Q05329 585 aa19.04■□□□□ 0.64
CTSB-202ENST00000353047 BAATQ14032 418 aaPredicted RBP19.04■□□□□ 0.64
CTSB-202ENST00000353047 SLC1A5Q15758 541 aa19.04■□□□□ 0.64
CTSB-202ENST00000353047 SGSM1Q2NKQ1 1148 aa19.04■□□□□ 0.64
CTSB-202ENST00000353047 PIGWQ7Z7B1 504 aa19.04■□□□□ 0.64
CTSB-202ENST00000353047 DAW1Q8N136 415 aa19.04■□□□□ 0.64
CTSB-202ENST00000353047 EFCAB3Q8N7B9 438 aa19.04■□□□□ 0.64
CTSB-202ENST00000353047 BBOF1Q8ND07 529 aa19.04■□□□□ 0.64
CTSB-202ENST00000353047 INO80BQ9C086 356 aaPredicted RBP19.04■□□□□ 0.64
CTSB-202ENST00000353047 CNOT7Q9UIV1 285 aaKnown RBP19.04■□□□□ 0.64
CTSB-202ENST00000353047 PACSIN3Q9UKS6 424 aa19.04■□□□□ 0.64
CTSB-202ENST00000353047 NCANO14594 1321 aa19.04■□□□□ 0.64
CTSB-202ENST00000353047 AP1G2O75843 785 aa19.03■□□□□ 0.64
CTSB-202ENST00000353047 GGPS1O95749 300 aa19.03■□□□□ 0.64
CTSB-202ENST00000353047 TMEM191BP0C7N4 346 aa19.03■□□□□ 0.64
CTSB-202ENST00000353047 MCOLN2Q8IZK6 566 aa19.03■□□□□ 0.64
CTSB-202ENST00000353047 NETO2Q8NC67 525 aa19.03■□□□□ 0.64
CTSB-202ENST00000353047 MAGEB18Q96M61 343 aa19.03■□□□□ 0.64
CTSB-202ENST00000353047 ZNF277Q9NRM2 450 aaPredicted RBP19.03■□□□□ 0.64
CTSB-202ENST00000353047 SLC9A2Q9UBY0 812 aa19.03■□□□□ 0.64
CTSB-202ENST00000353047 AGO2Q9UKV8 859 aaKnown RBP19.03■□□□□ 0.64
CTSB-202ENST00000353047 AFF2P51816 1311 aa19.03■□□□□ 0.64
CTSB-202ENST00000353047 BGNP21810 368 aa19.03■□□□□ 0.64
CTSB-202ENST00000353047 ANXA13P27216 316 aa19.03■□□□□ 0.64
CTSB-202ENST00000353047 SERPINB3P29508 390 aa19.03■□□□□ 0.64
CTSB-202ENST00000353047 GPD1LQ8N335 351 aa19.03■□□□□ 0.64
CTSB-202ENST00000353047 TCP10LQ8TDR4 215 aa19.03■□□□□ 0.64
CTSB-202ENST00000353047 UTRNP46939 3433 aa19.03■□□□□ 0.64
CTSB-202ENST00000353047 NCF2P19878 526 aaPredicted RBP19.03■□□□□ 0.64
CTSB-202ENST00000353047 PGM1P36871 562 aa19.03■□□□□ 0.64
CTSB-202ENST00000353047 SPP2Q13103 211 aa19.03■□□□□ 0.64
CTSB-202ENST00000353047 KRT81Q14533 505 aa19.03■□□□□ 0.64
CTSB-202ENST00000353047 BTNL9Q6UXG8 535 aa19.03■□□□□ 0.64
CTSB-202ENST00000353047 NLRP4Q96MN2 994 aa19.03■□□□□ 0.64
CTSB-202ENST00000353047 TSSK1BQ9BXA7 367 aa19.03■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms