RNA–Protein interactions for RNA: ENST00000349703.6

RFC1-201, Transcript of replication factor C subunit 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene RFC1, Length 4,859 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC1-201ENST00000349703 KIAA1958Q8N8K9 716 aa6.32□□□□□ -1.4
RFC1-201ENST00000349703 PPIL4Q8WUA2 492 aaKnown RBP eCLIP6.32□□□□□ -1.4
RFC1-201ENST00000349703 CHTF18Q8WVB6 975 aa6.32□□□□□ -1.4
RFC1-201ENST00000349703 ZBTB9Q96C00 473 aa6.32□□□□□ -1.4
RFC1-201ENST00000349703 NR1H4Q96RI1 486 aaPredicted RBP6.32□□□□□ -1.4
RFC1-201ENST00000349703 COLEC11Q9BWP8 271 aa6.32□□□□□ -1.4
RFC1-201ENST00000349703 NT5C1AQ9BXI3 368 aa6.32□□□□□ -1.4
RFC1-201ENST00000349703 PCDHA7Q9UN72 937 aa6.32□□□□□ -1.4
RFC1-201ENST00000349703 FAM169AQ9Y6X4 670 aa6.32□□□□□ -1.4
RFC1-201ENST00000349703 A0A1W2PRQ8 180 aa6.32□□□□□ -1.4
RFC1-201ENST00000349703 ATMINO43313 823 aaPredicted RBP6.32□□□□□ -1.4
RFC1-201ENST00000349703 JAK2O60674 1132 aa6.32□□□□□ -1.4
RFC1-201ENST00000349703 CXCR5P32302 372 aa6.32□□□□□ -1.4
RFC1-201ENST00000349703 GNL1P36915 607 aaPredicted RBP6.32□□□□□ -1.4
RFC1-201ENST00000349703 CBX3Q13185 183 aa6.32□□□□□ -1.4
RFC1-201ENST00000349703 FGL2Q14314 439 aa6.32□□□□□ -1.4
RFC1-201ENST00000349703 NECTIN1Q15223 517 aa6.32□□□□□ -1.4
RFC1-201ENST00000349703 GEN1Q17RS7 908 aa6.32□□□□□ -1.4
RFC1-201ENST00000349703 MAP3K21Q5TCX8 1036 aa6.32□□□□□ -1.4
RFC1-201ENST00000349703 CXorf57Q6NSI4 855 aaKnown RBP6.32□□□□□ -1.4
RFC1-201ENST00000349703 MPZL3Q6UWV2 235 aa6.32□□□□□ -1.4
RFC1-201ENST00000349703 ATG14Q6ZNE5 492 aa6.32□□□□□ -1.4
RFC1-201ENST00000349703 CARNMT1Q8N4J0 409 aa6.32□□□□□ -1.4
RFC1-201ENST00000349703 GPBAR1Q8TDU6 330 aa6.32□□□□□ -1.4
RFC1-201ENST00000349703 UTP15Q8TED0 518 aaKnown RBP6.32□□□□□ -1.4
RFC1-201ENST00000349703 TRAPPC9Q96Q05 1148 aa6.32□□□□□ -1.4
RFC1-201ENST00000349703 FUT8Q9BYC5 575 aa6.32□□□□□ -1.4
RFC1-201ENST00000349703 RIC8AQ9NPQ8 531 aa6.32□□□□□ -1.4
RFC1-201ENST00000349703 NDUFA13Q9P0J0 144 aa6.32□□□□□ -1.4
RFC1-201ENST00000349703 SLC12A4Q9UP95 1085 aa6.32□□□□□ -1.4
RFC1-201ENST00000349703 PHGDHO43175 533 aaKnown RBP6.31□□□□□ -1.4
RFC1-201ENST00000349703 HOXB7P09629 217 aa6.31□□□□□ -1.4
RFC1-201ENST00000349703 ATP5F1P24539 256 aaPredicted RBP6.31□□□□□ -1.4
RFC1-201ENST00000349703 EIF2DP41214 584 aaKnown RBP6.31□□□□□ -1.4
RFC1-201ENST00000349703 RAP1GAPP47736 663 aa6.31□□□□□ -1.4
RFC1-201ENST00000349703 DNAJC3Q13217 504 aa6.31□□□□□ -1.4
RFC1-201ENST00000349703 DRP2Q13474 957 aa6.31□□□□□ -1.4
RFC1-201ENST00000349703 DPCR1Q3MIW9 517 aa6.31□□□□□ -1.4
RFC1-201ENST00000349703 ARHGAP36Q6ZRI8 547 aa6.31□□□□□ -1.4
RFC1-201ENST00000349703 PDZD4Q76G19 769 aaPredicted RBP6.31□□□□□ -1.4
RFC1-201ENST00000349703 G2E3Q7L622 706 aa6.31□□□□□ -1.4
RFC1-201ENST00000349703 ARHGEF25Q86VW2 580 aa6.31□□□□□ -1.4
RFC1-201ENST00000349703 FAM114A1Q8IWE2 563 aa6.31□□□□□ -1.4
RFC1-201ENST00000349703 FRMD1Q8N878 549 aa6.31□□□□□ -1.4
RFC1-201ENST00000349703 DCAF4Q8WV16 495 aa6.31□□□□□ -1.4
RFC1-201ENST00000349703 OTULINQ96BN8 352 aa6.31□□□□□ -1.4
RFC1-201ENST00000349703 ZNF274Q96GC6 653 aaPredicted RBP6.31□□□□□ -1.4
RFC1-201ENST00000349703 ZNF419Q96HQ0 510 aaPredicted RBP6.31□□□□□ -1.4
RFC1-201ENST00000349703 DBF4Q9UBU7 674 aaPredicted RBP6.31□□□□□ -1.4
RFC1-201ENST00000349703 PHTF1Q9UMS5 762 aa6.31□□□□□ -1.4
RFC1-201ENST00000349703 NCKAP1Q9Y2A7 1128 aa6.31□□□□□ -1.4
RFC1-201ENST00000349703 ROBO2Q9HCK4 1378 aa6.31□□□□□ -1.4
RFC1-201ENST00000349703 NRXN1Q9ULB1 1477 aa6.31□□□□□ -1.4
RFC1-201ENST00000349703 STMND1H3BQB6 276 aa6.31□□□□□ -1.4
RFC1-201ENST00000349703 HMBSP08397 361 aa6.31□□□□□ -1.4
RFC1-201ENST00000349703 GHRP10912 638 aa6.31□□□□□ -1.4
RFC1-201ENST00000349703 IRF1P10914 325 aa6.31□□□□□ -1.4
RFC1-201ENST00000349703 SLC19A1P41440 591 aa6.31□□□□□ -1.4
RFC1-201ENST00000349703 ARFIP2P53365 341 aa6.31□□□□□ -1.4
RFC1-201ENST00000349703 PURAQ00577 322 aaKnown RBP6.31□□□□□ -1.4
RFC1-201ENST00000349703 ROM1Q03395 351 aa6.31□□□□□ -1.4
RFC1-201ENST00000349703 EIF4A2Q14240 407 aaKnown RBP6.31□□□□□ -1.4
RFC1-201ENST00000349703 RBBP5Q15291 538 aaKnown RBP6.31□□□□□ -1.4
RFC1-201ENST00000349703 SLC30A10Q6XR72 485 aa6.31□□□□□ -1.4
RFC1-201ENST00000349703 MAP4K3Q8IVH8 894 aa6.31□□□□□ -1.4
RFC1-201ENST00000349703 SLC39A10Q9ULF5 831 aa6.31□□□□□ -1.4
RFC1-201ENST00000349703 AURKCQ9UQB9 309 aa6.31□□□□□ -1.4
RFC1-201ENST00000349703 COL3A1P02461 1466 aaPredicted RBP6.31□□□□□ -1.4
RFC1-201ENST00000349703 EFCAB6Q5THR3 1501 aa6.31□□□□□ -1.4
RFC1-201ENST00000349703 IQANK1A0A1B0GTG1 560 aa6.31□□□□□ -1.4
RFC1-201ENST00000349703 A6NLC8 198 aa6.31□□□□□ -1.4
RFC1-201ENST00000349703 H0YCG3 227 aa6.31□□□□□ -1.4
RFC1-201ENST00000349703 LRG1P02750 347 aa6.31□□□□□ -1.4
RFC1-201ENST00000349703 PRG2P13727 222 aa6.31□□□□□ -1.4
RFC1-201ENST00000349703 PFKFB1P16118 471 aa6.31□□□□□ -1.4
RFC1-201ENST00000349703 CARSP49589 748 aaKnown RBP6.31□□□□□ -1.4
RFC1-201ENST00000349703 CCR9P51686 369 aa6.31□□□□□ -1.4
RFC1-201ENST00000349703 CRHR2Q13324 411 aa6.31□□□□□ -1.4
RFC1-201ENST00000349703 EPHA7Q15375 998 aa6.31□□□□□ -1.4
RFC1-201ENST00000349703 LRRC23Q53EV4 343 aaPredicted RBP6.31□□□□□ -1.4
RFC1-201ENST00000349703 RGS9BPQ6ZS82 235 aa6.31□□□□□ -1.4
RFC1-201ENST00000349703 PTRH1Q86Y79 214 aaKnown RBP6.31□□□□□ -1.4
RFC1-201ENST00000349703 GLB1L2Q8IW92 636 aa6.31□□□□□ -1.4
RFC1-201ENST00000349703 NUP43Q8NFH3 380 aa6.31□□□□□ -1.4
RFC1-201ENST00000349703 BAHD1Q8TBE0 780 aaPredicted RBP6.31□□□□□ -1.4
RFC1-201ENST00000349703 MTBPQ96DY7 904 aa6.31□□□□□ -1.4
RFC1-201ENST00000349703 ZKSCAN3Q9BRR0 538 aa6.31□□□□□ -1.4
RFC1-201ENST00000349703 KLHL4Q9C0H6 718 aa6.31□□□□□ -1.4
RFC1-201ENST00000349703 RNF121Q9H920 327 aa6.31□□□□□ -1.4
RFC1-201ENST00000349703 SAYSD1Q9NPB0 183 aa6.31□□□□□ -1.4
RFC1-201ENST00000349703 ARHGEF38Q9NXL2 777 aa6.31□□□□□ -1.4
RFC1-201ENST00000349703 TFCP2L1Q9NZI6 479 aa6.31□□□□□ -1.4
RFC1-201ENST00000349703 SEPT10Q9P0V9 454 aa6.31□□□□□ -1.4
RFC1-201ENST00000349703 WHRNQ9P202 907 aa6.31□□□□□ -1.4
RFC1-201ENST00000349703 TRPC4Q9UBN4 977 aa6.31□□□□□ -1.4
RFC1-201ENST00000349703 CHMP2BQ9UQN3 213 aa6.31□□□□□ -1.4
RFC1-201ENST00000349703 TTLL8A6PVC2 850 aa6.31□□□□□ -1.4
RFC1-201ENST00000349703 H0YIN7 160 aa6.31□□□□□ -1.4
RFC1-201ENST00000349703 FFAR2O15552 330 aa6.31□□□□□ -1.4
RFC1-201ENST00000349703 ZBTB43O43298 467 aa6.31□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms