RNA–Protein interactions for RNA: ENST00000349511.8

UBA3-201, Transcript of ubiquitin like modifier activating enzyme 3, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene UBA3, Length 2,112 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBA3-201ENST00000349511 LACTBL1A8MY62 500 aa14.35□□□□□ -0.11
UBA3-201ENST00000349511 ANKRD65E5RJM6 399 aa14.35□□□□□ -0.11
UBA3-201ENST00000349511 HEXIM1O94992 359 aaKnown RBP14.35□□□□□ -0.11
UBA3-201ENST00000349511 CCSAPQ6IQ19 270 aaPredicted RBP14.35□□□□□ -0.11
UBA3-201ENST00000349511 PXYLP1Q8TE99 480 aa14.35□□□□□ -0.11
UBA3-201ENST00000349511 ZIM3Q96PE6 472 aa14.35□□□□□ -0.11
UBA3-201ENST00000349511 RUFY1Q96T51 708 aa14.35□□□□□ -0.11
UBA3-201ENST00000349511 ADPGKQ9BRR6 497 aa14.35□□□□□ -0.11
UBA3-201ENST00000349511 SEPT11Q9NVA2 429 aaKnown RBP14.35□□□□□ -0.11
UBA3-201ENST00000349511 NFU1Q9UMS0 254 aa14.35□□□□□ -0.11
UBA3-201ENST00000349511 PIN4Q9Y237 131 aaKnown RBP14.35□□□□□ -0.11
UBA3-201ENST00000349511 TRIP11Q15643 1979 aa14.35□□□□□ -0.11
UBA3-201ENST00000349511 UMODL1Q5DID0 1318 aa14.35□□□□□ -0.11
UBA3-201ENST00000349511 ZSCAN5CA6NGD5 496 aaPredicted RBP14.35□□□□□ -0.11
UBA3-201ENST00000349511 TMCO5BA8MYB1 307 aa14.35□□□□□ -0.11
UBA3-201ENST00000349511 NFICP08651 508 aa14.35□□□□□ -0.11
UBA3-201ENST00000349511 TMEM191BP0C7N4 346 aa14.35□□□□□ -0.11
UBA3-201ENST00000349511 FERP16591 822 aa14.35□□□□□ -0.11
UBA3-201ENST00000349511 HOXC8P31273 242 aa14.35□□□□□ -0.11
UBA3-201ENST00000349511 GRK4P32298 578 aa14.35□□□□□ -0.11
UBA3-201ENST00000349511 CORO7P57737 925 aa14.35□□□□□ -0.11
UBA3-201ENST00000349511 GUCY2DQ02846 1103 aa14.35□□□□□ -0.11
UBA3-201ENST00000349511 NCOA4Q13772 614 aa14.35□□□□□ -0.11
UBA3-201ENST00000349511 DNAJC21Q5F1R6 531 aaKnown RBP14.35□□□□□ -0.11
UBA3-201ENST00000349511 WDR44Q5JSH3 913 aa14.35□□□□□ -0.11
UBA3-201ENST00000349511 WDR49Q8IV35 697 aa14.35□□□□□ -0.11
UBA3-201ENST00000349511 KRT12Q99456 494 aa14.35□□□□□ -0.11
UBA3-201ENST00000349511 APOL6Q9BWW8 343 aa14.35□□□□□ -0.11
UBA3-201ENST00000349511 APOBEC3GQ9HC16 384 aaKnown RBP14.35□□□□□ -0.11
UBA3-201ENST00000349511 ANK1P16157 1881 aa14.35□□□□□ -0.11
UBA3-201ENST00000349511 THSD7BQ9C0I4 1608 aa14.34□□□□□ -0.11
UBA3-201ENST00000349511 ESYT3A0FGR9 886 aa14.34□□□□□ -0.11
UBA3-201ENST00000349511 CYP26A1O43174 497 aa14.34□□□□□ -0.11
UBA3-201ENST00000349511 SGPL1O95470 568 aa14.34□□□□□ -0.11
UBA3-201ENST00000349511 KRT19P08727 400 aa14.34□□□□□ -0.11
UBA3-201ENST00000349511 FAM153BP0C7A2 387 aa14.34□□□□□ -0.11
UBA3-201ENST00000349511 MCF2P10911 925 aa14.34□□□□□ -0.11
UBA3-201ENST00000349511 MAGEA9P43362 315 aa14.34□□□□□ -0.11
UBA3-201ENST00000349511 GUCY2FP51841 1108 aa14.34□□□□□ -0.11
UBA3-201ENST00000349511 MFAP3P55082 362 aa14.34□□□□□ -0.11
UBA3-201ENST00000349511 DUOXA2Q1HG44 320 aa14.34□□□□□ -0.11
UBA3-201ENST00000349511 SLC10A6Q3KNW5 377 aa14.34□□□□□ -0.11
UBA3-201ENST00000349511 FAM153CQ494X1 144 aa14.34□□□□□ -0.11
UBA3-201ENST00000349511 JADE1Q6IE81 842 aa14.34□□□□□ -0.11
UBA3-201ENST00000349511 RNF180Q86T96 592 aa14.34□□□□□ -0.11
UBA3-201ENST00000349511 GLYCTKQ8IVS8 523 aa14.34□□□□□ -0.11
UBA3-201ENST00000349511 SLC20A1Q8WUM9 679 aa14.34□□□□□ -0.11
UBA3-201ENST00000349511 IFT81Q8WYA0 676 aa14.34□□□□□ -0.11
UBA3-201ENST00000349511 OSBPL7Q9BZF2 842 aa14.34□□□□□ -0.11
UBA3-201ENST00000349511 HMX1Q9NP08 348 aaPredicted RBP14.34□□□□□ -0.11
UBA3-201ENST00000349511 TRMT13Q9NUP7 481 aaKnown RBP14.34□□□□□ -0.11
UBA3-201ENST00000349511 SNTG2Q9NY99 539 aa14.34□□□□□ -0.11
UBA3-201ENST00000349511 FAM153AQ9UHL3 310 aa14.34□□□□□ -0.11
UBA3-201ENST00000349511 CDY2AQ9Y6F7 541 aa14.34□□□□□ -0.11
UBA3-201ENST00000349511 CLTAP09496 248 aa14.33□□□□□ -0.11
UBA3-201ENST00000349511 KRT5P13647 590 aa14.33□□□□□ -0.11
UBA3-201ENST00000349511 PRKCIP41743 596 aa14.33□□□□□ -0.11
UBA3-201ENST00000349511 RNASE9P60153 205 aaKnown RBP14.33□□□□□ -0.11
UBA3-201ENST00000349511 MYL6P60660 151 aa14.33□□□□□ -0.11
UBA3-201ENST00000349511 GNGT1P63211 74 aa14.33□□□□□ -0.11
UBA3-201ENST00000349511 SLC47A2Q86VL8 602 aa14.33□□□□□ -0.11
UBA3-201ENST00000349511 BEGAINQ9BUH8 593 aa14.33□□□□□ -0.11
UBA3-201ENST00000349511 C1orf112Q9NSG2 853 aa14.33□□□□□ -0.11
UBA3-201ENST00000349511 NOC2LQ9Y3T9 749 aaKnown RBP14.33□□□□□ -0.11
UBA3-201ENST00000349511 NUB1Q9Y5A7 615 aa14.33□□□□□ -0.11
UBA3-201ENST00000349511 DDX3XO00571 662 aaKnown RBP eCLIP14.33□□□□□ -0.12
UBA3-201ENST00000349511 EIF3HO15372 352 aaKnown RBP eCLIP14.33□□□□□ -0.12
UBA3-201ENST00000349511 AKAP5P24588 427 aa14.33□□□□□ -0.12
UBA3-201ENST00000349511 ACLYP53396 1101 aa14.33□□□□□ -0.12
UBA3-201ENST00000349511 CDC42EP1Q00587 391 aa14.33□□□□□ -0.12
UBA3-201ENST00000349511 PAK2Q13177 524 aa14.33□□□□□ -0.12
UBA3-201ENST00000349511 ITGA7Q13683 1181 aa14.33□□□□□ -0.12
UBA3-201ENST00000349511 PTGISQ16647 500 aa14.33□□□□□ -0.12
UBA3-201ENST00000349511 LHX8Q68G74 356 aa14.33□□□□□ -0.12
UBA3-201ENST00000349511 TAF2Q6P1X5 1199 aa14.33□□□□□ -0.12
UBA3-201ENST00000349511 PALB2Q86YC2 1186 aa14.33□□□□□ -0.12
UBA3-201ENST00000349511 PCSK9Q8NBP7 692 aaKnown RBP14.33□□□□□ -0.12
UBA3-201ENST00000349511 LNX1Q8TBB1 728 aaPredicted RBP14.33□□□□□ -0.12
UBA3-201ENST00000349511 CASKIN2Q8WXE0 1202 aa14.33□□□□□ -0.12
UBA3-201ENST00000349511 ACAP3Q96P50 834 aa14.33□□□□□ -0.12
UBA3-201ENST00000349511 CELF4Q9BZC1 486 aaKnown RBP14.33□□□□□ -0.12
UBA3-201ENST00000349511 TRIM6Q9C030 488 aaPredicted RBP14.33□□□□□ -0.12
UBA3-201ENST00000349511 BZW2Q9Y6E2 419 aaKnown RBP14.33□□□□□ -0.12
UBA3-201ENST00000349511 GNRH1P01148 92 aa14.32□□□□□ -0.12
UBA3-201ENST00000349511 IBSPP21815 317 aaPredicted RBP14.32□□□□□ -0.12
UBA3-201ENST00000349511 RFX1P22670 979 aa14.32□□□□□ -0.12
UBA3-201ENST00000349511 THPOP40225 353 aa14.32□□□□□ -0.12
UBA3-201ENST00000349511 CCT5P48643 541 aa14.32□□□□□ -0.12
UBA3-201ENST00000349511 CRYBB1P53674 252 aaPredicted RBP14.32□□□□□ -0.12
UBA3-201ENST00000349511 NOP14P78316 857 aaKnown RBP14.32□□□□□ -0.12
UBA3-201ENST00000349511 SKOR1P84550 965 aa14.32□□□□□ -0.12
UBA3-201ENST00000349511 ENPEPQ07075 957 aa14.32□□□□□ -0.12
UBA3-201ENST00000349511 NFX1Q12986 1120 aaKnown RBP14.32□□□□□ -0.12
UBA3-201ENST00000349511 TRPC3Q13507 836 aa14.32□□□□□ -0.12
UBA3-201ENST00000349511 CFAP58Q5T655 872 aa14.32□□□□□ -0.12
UBA3-201ENST00000349511 TTC19Q6DKK2 380 aaPredicted RBP14.32□□□□□ -0.12
UBA3-201ENST00000349511 NOTUMQ6P988 496 aa14.32□□□□□ -0.12
UBA3-201ENST00000349511 SLC27A1Q6PCB7 646 aa14.32□□□□□ -0.12
UBA3-201ENST00000349511 IQCKQ8N0W5 287 aa14.32□□□□□ -0.12
UBA3-201ENST00000349511 SLAIN1Q8ND83 568 aa14.32□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms