RNA–Protein interactions for RNA: ENST00000349311.12

UBE2D3-204, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene UBE2D3, Length 838 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-204ENST00000349311 LACTB2Q53H82 288 aaPredicted RBP8.4□□□□□ -1.06
UBE2D3-204ENST00000349311 NT5DC1Q5TFE4 455 aa8.4□□□□□ -1.06
UBE2D3-204ENST00000349311 SPATA1Q5VX52 437 aa8.4□□□□□ -1.06
UBE2D3-204ENST00000349311 TTC19Q6DKK2 380 aaPredicted RBP8.4□□□□□ -1.06
UBE2D3-204ENST00000349311 NCAPH2Q6IBW4 605 aa8.4□□□□□ -1.06
UBE2D3-204ENST00000349311 PPP4R3AQ6IN85 833 aa8.4□□□□□ -1.06
UBE2D3-204ENST00000349311 CYB5D1Q6P9G0 228 aa8.4□□□□□ -1.06
UBE2D3-204ENST00000349311 OTOP3Q7RTS5 596 aa8.4□□□□□ -1.06
UBE2D3-204ENST00000349311 ARMC9Q7Z3E5 817 aa8.4□□□□□ -1.06
UBE2D3-204ENST00000349311 NLRP14Q86W24 1093 aa8.4□□□□□ -1.06
UBE2D3-204ENST00000349311 CEP57Q86XR8 500 aa8.4□□□□□ -1.06
UBE2D3-204ENST00000349311 MIB1Q86YT6 1006 aa8.4□□□□□ -1.06
UBE2D3-204ENST00000349311 PCDH19Q8TAB3 1148 aa8.4□□□□□ -1.06
UBE2D3-204ENST00000349311 ZNF483Q8TF39 744 aaPredicted RBP8.4□□□□□ -1.06
UBE2D3-204ENST00000349311 CAVIN3Q969G5 261 aa8.4□□□□□ -1.06
UBE2D3-204ENST00000349311 SUCLG2Q96I99 432 aa8.4□□□□□ -1.06
UBE2D3-204ENST00000349311 PSMD1Q99460 953 aa8.4□□□□□ -1.06
UBE2D3-204ENST00000349311 PAIP2Q9BPZ3 127 aaKnown RBP8.4□□□□□ -1.06
UBE2D3-204ENST00000349311 JAM3Q9BX67 310 aa8.4□□□□□ -1.06
UBE2D3-204ENST00000349311 SGPP1Q9BX95 441 aa8.4□□□□□ -1.06
UBE2D3-204ENST00000349311 RNF38Q9H0F5 515 aa8.4□□□□□ -1.06
UBE2D3-204ENST00000349311 SIRT5Q9NXA8 310 aa8.4□□□□□ -1.06
UBE2D3-204ENST00000349311 MAN1B1Q9UKM7 699 aa8.4□□□□□ -1.06
UBE2D3-204ENST00000349311 ZBTB1Q9Y2K1 713 aa8.4□□□□□ -1.06
UBE2D3-204ENST00000349311 COA3Q9Y2R0 106 aaPredicted RBP8.4□□□□□ -1.06
UBE2D3-204ENST00000349311 PCDHA8Q9Y5H6 950 aa8.4□□□□□ -1.06
UBE2D3-204ENST00000349311 LRP5O75197 1615 aa8.4□□□□□ -1.07
UBE2D3-204ENST00000349311 MYH6P13533 1939 aa8.39□□□□□ -1.07
UBE2D3-204ENST00000349311 TLDC2A0PJX2 215 aa8.39□□□□□ -1.07
UBE2D3-204ENST00000349311 DNAJC8O75937 253 aaPredicted RBP8.39□□□□□ -1.07
UBE2D3-204ENST00000349311 CRTAMO95727 393 aa8.39□□□□□ -1.07
UBE2D3-204ENST00000349311 FAM107AO95990 144 aa8.39□□□□□ -1.07
UBE2D3-204ENST00000349311 PCCAP05165 728 aaPredicted RBP8.39□□□□□ -1.07
UBE2D3-204ENST00000349311 CYP21A2P08686 494 aa8.39□□□□□ -1.07
UBE2D3-204ENST00000349311 LSP1P33241 339 aa8.39□□□□□ -1.07
UBE2D3-204ENST00000349311 CRKLP46109 303 aaKnown RBP8.39□□□□□ -1.07
UBE2D3-204ENST00000349311 CCNHP51946 323 aaPredicted RBP8.39□□□□□ -1.07
UBE2D3-204ENST00000349311 EPHB3P54753 998 aa8.39□□□□□ -1.07
UBE2D3-204ENST00000349311 CCT2P78371 535 aaKnown RBP8.39□□□□□ -1.07
UBE2D3-204ENST00000349311 KRT83P78385 493 aa8.39□□□□□ -1.07
UBE2D3-204ENST00000349311 ZNF200P98182 395 aaPredicted RBP8.39□□□□□ -1.07
UBE2D3-204ENST00000349311 KIF23Q02241 960 aaPredicted RBP8.39□□□□□ -1.07
UBE2D3-204ENST00000349311 PDCLQ13371 301 aa8.39□□□□□ -1.07
UBE2D3-204ENST00000349311 ITPK1Q13572 414 aa8.39□□□□□ -1.07
UBE2D3-204ENST00000349311 MORC3Q14149 939 aa8.39□□□□□ -1.07
UBE2D3-204ENST00000349311 CCDC38Q502W7 563 aa8.39□□□□□ -1.07
UBE2D3-204ENST00000349311 CDCA2Q69YH5 1023 aaPredicted RBP8.39□□□□□ -1.07
UBE2D3-204ENST00000349311 C6orf89Q6UWU4 347 aa8.39□□□□□ -1.07
UBE2D3-204ENST00000349311 CLEC4GQ6UXB4 293 aa8.39□□□□□ -1.07
UBE2D3-204ENST00000349311 ZNF572Q7Z3I7 529 aaPredicted RBP8.39□□□□□ -1.07
UBE2D3-204ENST00000349311 ZNF589Q86UQ0 364 aaPredicted RBP8.39□□□□□ -1.07
UBE2D3-204ENST00000349311 KRTAP19-1Q8IUB9 90 aa8.39□□□□□ -1.07
UBE2D3-204ENST00000349311 CD302Q8IX05 232 aa8.39□□□□□ -1.07
UBE2D3-204ENST00000349311 NLGN1Q8N2Q7 840 aa8.39□□□□□ -1.07
UBE2D3-204ENST00000349311 CCDC26Q8TAB7 109 aa8.39□□□□□ -1.07
UBE2D3-204ENST00000349311 MZB1Q8WU39 189 aa8.39□□□□□ -1.07
UBE2D3-204ENST00000349311 CPA5Q8WXQ8 436 aa8.39□□□□□ -1.07
UBE2D3-204ENST00000349311 RIN2Q8WYP3 895 aaPredicted RBP8.39□□□□□ -1.07
UBE2D3-204ENST00000349311 KRTAP9-2Q9BYQ4 174 aa8.39□□□□□ -1.07
UBE2D3-204ENST00000349311 IPPKQ9H8X2 491 aa8.39□□□□□ -1.07
UBE2D3-204ENST00000349311 AKAP11Q9UKA4 1901 aa8.39□□□□□ -1.07
UBE2D3-204ENST00000349311 MYH2Q9UKX2 1941 aa8.39□□□□□ -1.07
UBE2D3-204ENST00000349311 ZNF609O15014 1411 aa8.38□□□□□ -1.07
UBE2D3-204ENST00000349311 SYNRGQ9UMZ2 1314 aa8.38□□□□□ -1.07
UBE2D3-204ENST00000349311 HMGB1P1B2RPK0 211 aaPredicted RBP8.38□□□□□ -1.07
UBE2D3-204ENST00000349311 FAM47E-STBD1D6RA91 191 aa8.38□□□□□ -1.07
UBE2D3-204ENST00000349311 HGSO14964 777 aaPredicted RBP8.38□□□□□ -1.07
UBE2D3-204ENST00000349311 AHCYL1O43865 530 aa8.38□□□□□ -1.07
UBE2D3-204ENST00000349311 CDKL5O76039 1030 aa8.38□□□□□ -1.07
UBE2D3-204ENST00000349311 CKMP06732 381 aa8.38□□□□□ -1.07
UBE2D3-204ENST00000349311 ASGR2P07307 311 aa8.38□□□□□ -1.07
UBE2D3-204ENST00000349311 RFX5P48382 616 aaPredicted RBP8.38□□□□□ -1.07
UBE2D3-204ENST00000349311 VAV2P52735 878 aa8.38□□□□□ -1.07
UBE2D3-204ENST00000349311 PAK1Q13153 545 aa8.38□□□□□ -1.07
UBE2D3-204ENST00000349311 XRCC4Q13426 336 aa8.38□□□□□ -1.07
UBE2D3-204ENST00000349311 POSTNQ15063 836 aa8.38□□□□□ -1.07
UBE2D3-204ENST00000349311 GLE1Q53GS7 698 aaKnown RBP8.38□□□□□ -1.07
UBE2D3-204ENST00000349311 TTC39AQ5SRH9 613 aa8.38□□□□□ -1.07
UBE2D3-204ENST00000349311 CFAP58Q5T655 872 aa8.38□□□□□ -1.07
UBE2D3-204ENST00000349311 CRELD2Q6UXH1 353 aaPredicted RBP8.38□□□□□ -1.07
UBE2D3-204ENST00000349311 TMEFF1Q8IYR6 380 aa8.38□□□□□ -1.07
UBE2D3-204ENST00000349311 ZNF34Q8IZ26 560 aa8.38□□□□□ -1.07
UBE2D3-204ENST00000349311 FUKQ8N0W3 1084 aa8.38□□□□□ -1.07
UBE2D3-204ENST00000349311 ACRBPQ8NEB7 543 aa8.38□□□□□ -1.07
UBE2D3-204ENST00000349311 TRIM58Q8NG06 486 aa8.38□□□□□ -1.07
UBE2D3-204ENST00000349311 MYCBPAPQ8TBZ2 947 aa8.38□□□□□ -1.07
UBE2D3-204ENST00000349311 SCLT1Q96NL6 688 aa8.38□□□□□ -1.07
UBE2D3-204ENST00000349311 ANKRD27Q96NW4 1050 aa8.38□□□□□ -1.07
UBE2D3-204ENST00000349311 CCT8L2Q96SF2 557 aa8.38□□□□□ -1.07
UBE2D3-204ENST00000349311 OSBPL9Q96SU4 736 aa8.38□□□□□ -1.07
UBE2D3-204ENST00000349311 MMS19Q96T76 1030 aa8.38□□□□□ -1.07
UBE2D3-204ENST00000349311 SLC38A3Q99624 504 aa8.38□□□□□ -1.07
UBE2D3-204ENST00000349311 MOV10L1Q9BXT6 1211 aaKnown RBP8.38□□□□□ -1.07
UBE2D3-204ENST00000349311 AP5M1Q9H0R1 490 aa8.38□□□□□ -1.07
UBE2D3-204ENST00000349311 BOLA2Q9H3K6 86 aa8.38□□□□□ -1.07
UBE2D3-204ENST00000349311 EPB41L4AQ9HCS5 686 aaPredicted RBP8.38□□□□□ -1.07
UBE2D3-204ENST00000349311 HELLSQ9NRZ9 838 aa8.38□□□□□ -1.07
UBE2D3-204ENST00000349311 ADD3Q9UEY8 706 aaKnown RBP8.38□□□□□ -1.07
UBE2D3-204ENST00000349311 SFMBT1Q9UHJ3 866 aa8.38□□□□□ -1.07
UBE2D3-204ENST00000349311 SH3BP1Q9Y3L3 701 aa8.38□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms