RNA–Protein interactions for RNA: ENST00000348495.10

SSBP4-202, Transcript of single stranded DNA binding protein 4, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene SSBP4, Length 1,721 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP4-202ENST00000348495 ARID3AQ99856 593 aa29.06■■■□□ 2.24
SSBP4-202ENST00000348495 PAAF1Q9BRP4 392 aa29.06■■■□□ 2.24
SSBP4-202ENST00000348495 CXXC1Q9P0U4 656 aaPredicted RBP29.06■■■□□ 2.24
SSBP4-202ENST00000348495 TBKBP1A7MCY6 615 aa29.06■■■□□ 2.24
SSBP4-202ENST00000348495 PODXLO00592 558 aa29.06■■■□□ 2.24
SSBP4-202ENST00000348495 ASPAP45381 313 aa29.06■■■□□ 2.24
SSBP4-202ENST00000348495 PDXDC1Q6P996 788 aa29.06■■■□□ 2.24
SSBP4-202ENST00000348495 TMCO2Q7Z6W1 182 aaPredicted RBP29.06■■■□□ 2.24
SSBP4-202ENST00000348495 ZNF397Q8NF99 534 aaPredicted RBP29.06■■■□□ 2.24
SSBP4-202ENST00000348495 LRRC53A6NM62 1247 aa29.05■■■□□ 2.24
SSBP4-202ENST00000348495 SPTLC1O15269 473 aa29.05■■■□□ 2.24
SSBP4-202ENST00000348495 TBXAS1P24557 533 aaPredicted RBP29.05■■■□□ 2.24
SSBP4-202ENST00000348495 TAF6P49848 677 aa29.05■■■□□ 2.24
SSBP4-202ENST00000348495 MFAP3P55082 362 aa29.05■■■□□ 2.24
SSBP4-202ENST00000348495 RAPGEF1Q13905 1077 aa29.05■■■□□ 2.24
SSBP4-202ENST00000348495 DRAP1Q14919 205 aaPredicted RBP29.05■■■□□ 2.24
SSBP4-202ENST00000348495 C3orf58Q8NDZ4 430 aa29.05■■■□□ 2.24
SSBP4-202ENST00000348495 JAKMIP2Q96AA8 810 aa29.05■■■□□ 2.24
SSBP4-202ENST00000348495 BCO2Q9BYV7 579 aa29.05■■■□□ 2.24
SSBP4-202ENST00000348495 ABHD10Q9NUJ1 306 aa29.05■■■□□ 2.24
SSBP4-202ENST00000348495 POLIQ9UNA4 740 aa29.05■■■□□ 2.24
SSBP4-202ENST00000348495 F8VZ95 297 aa29.04■■■□□ 2.24
SSBP4-202ENST00000348495 IGFBP6P24592 240 aaPredicted RBP29.04■■■□□ 2.24
SSBP4-202ENST00000348495 LILRA4P59901 499 aa29.04■■■□□ 2.24
SSBP4-202ENST00000348495 RNASELQ05823 741 aaKnown RBP29.04■■■□□ 2.24
SSBP4-202ENST00000348495 LRRC43Q8N309 656 aa29.04■■■□□ 2.24
SSBP4-202ENST00000348495 OR8K1Q8NGG5 319 aa29.04■■■□□ 2.24
SSBP4-202ENST00000348495 SHC3Q92529 594 aa29.04■■■□□ 2.24
SSBP4-202ENST00000348495 GDAP2Q9NXN4 497 aa29.04■■■□□ 2.24
SSBP4-202ENST00000348495 NXF1Q9UBU9 619 aaKnown RBP29.04■■■□□ 2.24
SSBP4-202ENST00000348495 ZBBXA8MT70 800 aa29.03■■■□□ 2.24
SSBP4-202ENST00000348495 UBR7Q8N806 425 aa29.03■■■□□ 2.24
SSBP4-202ENST00000348495 SPAG5Q96R06 1193 aa29.03■■■□□ 2.24
SSBP4-202ENST00000348495 NRDE2Q9H7Z3 1164 aa29.03■■■□□ 2.24
SSBP4-202ENST00000348495 KPNA7A9QM74 516 aa29.03■■■□□ 2.24
SSBP4-202ENST00000348495 ACO1P21399 889 aaKnown RBP29.03■■■□□ 2.24
SSBP4-202ENST00000348495 HNRNPH3P31942 346 aaKnown RBP29.03■■■□□ 2.24
SSBP4-202ENST00000348495 ARHGAP44Q17R89 818 aa29.03■■■□□ 2.24
SSBP4-202ENST00000348495 RASIP1Q5U651 963 aa29.03■■■□□ 2.24
SSBP4-202ENST00000348495 E4F1Q66K89 784 aaPredicted RBP29.03■■■□□ 2.24
SSBP4-202ENST00000348495 CD300LGQ6UXG3 332 aa29.03■■■□□ 2.24
SSBP4-202ENST00000348495 SYN2Q92777 582 aaPredicted RBP29.03■■■□□ 2.24
SSBP4-202ENST00000348495 PANX2Q96RD6 677 aa29.03■■■□□ 2.24
SSBP4-202ENST00000348495 NUCKS1Q9H1E3 243 aaKnown RBP29.03■■■□□ 2.24
SSBP4-202ENST00000348495 DNAJB4Q9UDY4 337 aa29.03■■■□□ 2.24
SSBP4-202ENST00000348495 CLSTN1O94985 981 aa29.02■■■□□ 2.24
SSBP4-202ENST00000348495 PTMAP06454 111 aaKnown RBP29.02■■■□□ 2.24
SSBP4-202ENST00000348495 AARSP49588 968 aaKnown RBP eCLIP29.02■■■□□ 2.244e-6■■■■■ 38
SSBP4-202ENST00000348495 SV2CQ496J9 727 aa29.02■■■□□ 2.24
SSBP4-202ENST00000348495 RABGGTAQ92696 567 aa29.02■■■□□ 2.24
SSBP4-202ENST00000348495 FAM193BQ96PV7 902 aaPredicted RBP29.02■■■□□ 2.24
SSBP4-202ENST00000348495 AIPL1Q9NZN9 384 aa29.02■■■□□ 2.24
SSBP4-202ENST00000348495 HCSTQ9UBK5 93 aa29.02■■■□□ 2.24
SSBP4-202ENST00000348495 FOXN3O00409 490 aaPredicted RBP29.01■■■□□ 2.23
SSBP4-202ENST00000348495 P4HA1P13674 534 aa29.01■■■□□ 2.23
SSBP4-202ENST00000348495 SMYD5Q6GMV2 418 aa29.01■■■□□ 2.23
SSBP4-202ENST00000348495 FAM117BQ6P1L5 589 aa29.01■■■□□ 2.23
SSBP4-202ENST00000348495 DCLRE1AQ6PJP8 1040 aa29.01■■■□□ 2.23
SSBP4-202ENST00000348495 LIMS2Q7Z4I7 341 aa29.01■■■□□ 2.23
SSBP4-202ENST00000348495 PNMA6AP0CW24 399 aaPredicted RBP29■■■□□ 2.23
SSBP4-202ENST00000348495 SOX5P35711 763 aa29■■■□□ 2.23
SSBP4-202ENST00000348495 MAGEA10P43363 369 aaPredicted RBP29■■■□□ 2.23
SSBP4-202ENST00000348495 TNNC1P63316 161 aa29■■■□□ 2.23
SSBP4-202ENST00000348495 PAN2Q504Q3 1202 aaKnown RBP29■■■□□ 2.23
SSBP4-202ENST00000348495 SDCBP2Q9H190 292 aa29■■■□□ 2.23
SSBP4-202ENST00000348495 SMYD3Q9H7B4 428 aa29■■■□□ 2.23
SSBP4-202ENST00000348495 CYP3A43Q9HB55 503 aa29■■■□□ 2.23
SSBP4-202ENST00000348495 CNTN6Q9UQ52 1028 aa29■■■□□ 2.23
SSBP4-202ENST00000348495 SNX9Q9Y5X1 595 aa29■■■□□ 2.23
SSBP4-202ENST00000348495 TMEM189-UBE2V1I3L0A0 370 aa29■■■□□ 2.23
SSBP4-202ENST00000348495 B3GAT3O94766 335 aa29■■■□□ 2.23
SSBP4-202ENST00000348495 GJB5O95377 273 aa29■■■□□ 2.23
SSBP4-202ENST00000348495 FECHP22830 423 aa29■■■□□ 2.23
SSBP4-202ENST00000348495 PAX3P23760 479 aa29■■■□□ 2.23
SSBP4-202ENST00000348495 DEKP35659 375 aaKnown RBP29■■■□□ 2.23
SSBP4-202ENST00000348495 STAT1P42224 750 aa29■■■□□ 2.23
SSBP4-202ENST00000348495 WDR59Q6PJI9 974 aa29■■■□□ 2.23
SSBP4-202ENST00000348495 LRRC8AQ8IWT6 810 aa29■■■□□ 2.23
SSBP4-202ENST00000348495 FAM71AQ8IYT1 594 aa29■■■□□ 2.23
SSBP4-202ENST00000348495 CMTR2Q8IYT2 770 aaKnown RBP29■■■□□ 2.23
SSBP4-202ENST00000348495 TMEM175Q9BSA9 504 aa29■■■□□ 2.23
SSBP4-202ENST00000348495 FAM124BQ9H5Z6 455 aaPredicted RBP29■■■□□ 2.23
SSBP4-202ENST00000348495 WEE2P0C1S8 567 aa28.99■■■□□ 2.23
SSBP4-202ENST00000348495 HTRA4P83105 476 aaPredicted RBP28.99■■■□□ 2.23
SSBP4-202ENST00000348495 MEA1Q16626 185 aa28.99■■■□□ 2.23
SSBP4-202ENST00000348495 SFMBT2Q5VUG0 894 aa28.99■■■□□ 2.23
SSBP4-202ENST00000348495 SCARA5Q6ZMJ2 495 aa28.99■■■□□ 2.23
SSBP4-202ENST00000348495 PHOSPHO2Q8TCD6 241 aa28.99■■■□□ 2.23
SSBP4-202ENST00000348495 SLC9A7Q96T83 725 aa28.99■■■□□ 2.23
SSBP4-202ENST00000348495 CWH43Q9H720 699 aa28.99■■■□□ 2.23
SSBP4-202ENST00000348495 SLC4A7Q9Y6M7 1214 aa28.99■■■□□ 2.23
SSBP4-202ENST00000348495 F8W810 466 aa28.98■■■□□ 2.23
SSBP4-202ENST00000348495 KIF4AO95239 1232 aa28.98■■■□□ 2.23
SSBP4-202ENST00000348495 CISHQ9NSE2 258 aa28.98■■■□□ 2.23
SSBP4-202ENST00000348495 ITGB1P05556 798 aa28.97■■■□□ 2.23
SSBP4-202ENST00000348495 RAP1GAPP47736 663 aa28.97■■■□□ 2.23
SSBP4-202ENST00000348495 OR1G1P47890 313 aa28.97■■■□□ 2.23
SSBP4-202ENST00000348495 CDH8P55286 799 aa28.97■■■□□ 2.23
SSBP4-202ENST00000348495 SOWAHAQ2M3V2 549 aa28.97■■■□□ 2.23
SSBP4-202ENST00000348495 IRF2BP2Q7Z5L9 587 aa28.97■■■□□ 2.23
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms