RNA–Protein interactions for RNA: ENST00000345519.9

CLTA-202, Transcript of clathrin light chain A, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CLTA, Length 1,073 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLTA-202ENST00000345519 PRKD2Q9BZL6 878 aa21.47■■□□□ 1.03
CLTA-202ENST00000345519 EPHX3Q9H6B9 360 aa21.47■■□□□ 1.03
CLTA-202ENST00000345519 KIAA1586Q9HCI6 787 aa21.47■■□□□ 1.03
CLTA-202ENST00000345519 WDR6Q9NNW5 1121 aaKnown RBP21.47■■□□□ 1.03
CLTA-202ENST00000345519 HSPBP1Q9NZL4 362 aa21.47■■□□□ 1.03
CLTA-202ENST00000345519 ZNF318Q5VUA4 2279 aa21.46■■□□□ 1.03
CLTA-202ENST00000345519 H7C4K7 107 aa21.46■■□□□ 1.03
CLTA-202ENST00000345519 SPTLC1O15269 473 aa21.46■■□□□ 1.03
CLTA-202ENST00000345519 DCXO43602 365 aa21.46■■□□□ 1.03
CLTA-202ENST00000345519 RHOBTB3O94955 611 aa21.46■■□□□ 1.03
CLTA-202ENST00000345519 WEE2P0C1S8 567 aa21.46■■□□□ 1.03
CLTA-202ENST00000345519 ALADP13716 330 aa21.46■■□□□ 1.03
CLTA-202ENST00000345519 DPYDQ12882 1025 aa21.46■■□□□ 1.03
CLTA-202ENST00000345519 STK4Q13043 487 aa21.46■■□□□ 1.03
CLTA-202ENST00000345519 KMT5BQ4FZB7 885 aa21.46■■□□□ 1.03
CLTA-202ENST00000345519 ZNF280DQ6N043 979 aa21.46■■□□□ 1.03
CLTA-202ENST00000345519 ZDHHC14Q8IZN3 488 aa21.46■■□□□ 1.03
CLTA-202ENST00000345519 FMR1NBQ8N0W7 255 aaPredicted RBP21.46■■□□□ 1.03
CLTA-202ENST00000345519 BORCS6Q96GS4 357 aa21.46■■□□□ 1.03
CLTA-202ENST00000345519 SLC39A2Q9NP94 309 aa21.46■■□□□ 1.03
CLTA-202ENST00000345519 DPP3Q9NY33 737 aa21.46■■□□□ 1.03
CLTA-202ENST00000345519 FBXL5Q9UKA1 691 aa21.46■■□□□ 1.03
CLTA-202ENST00000345519 MAFFQ9ULX9 164 aa21.46■■□□□ 1.03
CLTA-202ENST00000345519 GREB1Q4ZG55 1949 aa21.46■■□□□ 1.03
CLTA-202ENST00000345519 NUP210Q8TEM1 1887 aaPredicted RBP21.45■■□□□ 1.02
CLTA-202ENST00000345519 ARHGEF37A1IGU5 675 aa21.45■■□□□ 1.02
CLTA-202ENST00000345519 C2CD4DB7Z1M9 353 aa21.45■■□□□ 1.02
CLTA-202ENST00000345519 SPATA31D3P0C874 917 aa21.45■■□□□ 1.02
CLTA-202ENST00000345519 ATF2P15336 505 aa21.45■■□□□ 1.02
CLTA-202ENST00000345519 KNOP1Q1ED39 458 aaKnown RBP21.45■■□□□ 1.02
CLTA-202ENST00000345519 TPGS2Q68CL5 300 aa21.45■■□□□ 1.02
CLTA-202ENST00000345519 SPATA31D4Q6ZUB0 917 aa21.45■■□□□ 1.02
CLTA-202ENST00000345519 CCDC149Q6ZUS6 474 aa21.45■■□□□ 1.02
CLTA-202ENST00000345519 ENGASEQ8NFI3 743 aa21.45■■□□□ 1.02
CLTA-202ENST00000345519 FAM212AQ96EL1 285 aa21.45■■□□□ 1.02
CLTA-202ENST00000345519 RPGRIP1Q96KN7 1286 aa21.45■■□□□ 1.02
CLTA-202ENST00000345519 C1QTNF1Q9BXJ1 281 aa21.45■■□□□ 1.02
CLTA-202ENST00000345519 PCIF1Q9H4Z3 704 aa21.45■■□□□ 1.02
CLTA-202ENST00000345519 CLUHO75153 1309 aa21.45■■□□□ 1.02
CLTA-202ENST00000345519 GPR37L1O60883 481 aa21.44■■□□□ 1.02
CLTA-202ENST00000345519 ZNF202O95125 648 aa21.44■■□□□ 1.02
CLTA-202ENST00000345519 C8AP07357 584 aa21.44■■□□□ 1.02
CLTA-202ENST00000345519 PRR29P0C7W0 189 aa21.44■■□□□ 1.02
CLTA-202ENST00000345519 YWHAHQ04917 246 aaPredicted RBP21.44■■□□□ 1.02
CLTA-202ENST00000345519 SNW1Q13573 536 aaKnown RBP21.44■■□□□ 1.02
CLTA-202ENST00000345519 TCEAL8Q8IYN2 117 aa21.44■■□□□ 1.02
CLTA-202ENST00000345519 C1orf127Q8N9H9 656 aa21.44■■□□□ 1.02
CLTA-202ENST00000345519 KCTD10Q9H3F6 313 aa21.44■■□□□ 1.02
CLTA-202ENST00000345519 EXOC1Q9NV70 894 aa21.44■■□□□ 1.02
CLTA-202ENST00000345519 ITGA11Q9UKX5 1188 aa21.44■■□□□ 1.02
CLTA-202ENST00000345519 PTPRJQ12913 1337 aa21.44■■□□□ 1.02
CLTA-202ENST00000345519 GOLGA8IPA6NC78 632 aa21.43■■□□□ 1.02
CLTA-202ENST00000345519 ZNF233A6NK53 670 aa21.43■■□□□ 1.02
CLTA-202ENST00000345519 GOLGA8JA6NMD2 632 aa21.43■■□□□ 1.02
CLTA-202ENST00000345519 N4BP1O75113 896 aaKnown RBP21.43■■□□□ 1.02
CLTA-202ENST00000345519 RPN1P04843 607 aaKnown RBP21.43■■□□□ 1.02
CLTA-202ENST00000345519 PNPLA4P41247 253 aa21.43■■□□□ 1.02
CLTA-202ENST00000345519 TAF6P49848 677 aa21.43■■□□□ 1.02
CLTA-202ENST00000345519 KCNB1Q14721 858 aa21.43■■□□□ 1.02
CLTA-202ENST00000345519 LIN9Q5TKA1 542 aa21.43■■□□□ 1.02
CLTA-202ENST00000345519 CBWD2Q8IUF1 395 aa21.43■■□□□ 1.02
CLTA-202ENST00000345519 SLC9A9Q8IVB4 645 aa21.43■■□□□ 1.02
CLTA-202ENST00000345519 PLCD3Q8N3E9 789 aa21.43■■□□□ 1.02
CLTA-202ENST00000345519 LRRC52Q8N7C0 313 aa21.43■■□□□ 1.02
CLTA-202ENST00000345519 GOLGA5Q8TBA6 731 aa21.43■■□□□ 1.02
CLTA-202ENST00000345519 SMG7Q92540 1137 aaKnown RBP21.43■■□□□ 1.02
CLTA-202ENST00000345519 SENP8Q96LD8 212 aa21.43■■□□□ 1.02
CLTA-202ENST00000345519 GZF1Q9H116 711 aaPredicted RBP21.43■■□□□ 1.02
CLTA-202ENST00000345519 PDE11AQ9HCR9 933 aa21.43■■□□□ 1.02
CLTA-202ENST00000345519 MUTYHQ9UIF7 546 aa21.43■■□□□ 1.02
CLTA-202ENST00000345519 ODC1P11926 461 aa21.42■■□□□ 1.02
CLTA-202ENST00000345519 MYBPC2Q14324 1141 aa21.42■■□□□ 1.02
CLTA-202ENST00000345519 SURF1Q15526 300 aa21.42■■□□□ 1.02
CLTA-202ENST00000345519 SNRNP35Q16560 246 aaKnown RBP21.42■■□□□ 1.02
CLTA-202ENST00000345519 CTXN3Q4LDR2 81 aa21.42■■□□□ 1.02
CLTA-202ENST00000345519 HS2ST1Q7LGA3 356 aa21.42■■□□□ 1.02
CLTA-202ENST00000345519 TDRD5Q8NAT2 981 aaKnown RBP21.42■■□□□ 1.02
CLTA-202ENST00000345519 XXYLT1Q8NBI6 393 aa21.42■■□□□ 1.02
CLTA-202ENST00000345519 SLC7A14Q8TBB6 771 aa21.42■■□□□ 1.02
CLTA-202ENST00000345519 ZNF560Q96MR9 790 aa21.42■■□□□ 1.02
CLTA-202ENST00000345519 AVENQ9NQS1 362 aaPredicted RBP21.42■■□□□ 1.02
CLTA-202ENST00000345519 INTS13Q9NVM9 706 aa21.42■■□□□ 1.02
CLTA-202ENST00000345519 DMAC2Q9NW81 257 aa21.42■■□□□ 1.02
CLTA-202ENST00000345519 AFF4Q9UHB7 1163 aaKnown RBP21.42■■□□□ 1.02
CLTA-202ENST00000345519 SIX4Q9UIU6 781 aa21.42■■□□□ 1.02
CLTA-202ENST00000345519 OR6C75A6NL08 312 aa21.41■■□□□ 1.02
CLTA-202ENST00000345519 SPDYE4A6NLX3 237 aa21.41■■□□□ 1.02
CLTA-202ENST00000345519 PSMD6Q15008 389 aa21.41■■□□□ 1.02
CLTA-202ENST00000345519 NFIL3Q16649 462 aa21.41■■□□□ 1.02
CLTA-202ENST00000345519 PTPN21Q16825 1174 aa21.41■■□□□ 1.02
CLTA-202ENST00000345519 PPM1LQ5SGD2 360 aa21.41■■□□□ 1.02
CLTA-202ENST00000345519 OTOP3Q7RTS5 596 aa21.41■■□□□ 1.02
CLTA-202ENST00000345519 WDR49Q8IV35 697 aa21.41■■□□□ 1.02
CLTA-202ENST00000345519 NELFCDQ8IXH7 590 aa21.41■■□□□ 1.02
CLTA-202ENST00000345519 SPATA20Q8TB22 786 aa21.41■■□□□ 1.02
CLTA-202ENST00000345519 CACTINQ8WUQ7 758 aaKnown RBP21.41■■□□□ 1.02
CLTA-202ENST00000345519 KPNA7A9QM74 516 aa21.4■■□□□ 1.02
CLTA-202ENST00000345519 PDXKO00764 312 aa21.4■■□□□ 1.02
CLTA-202ENST00000345519 VNN2O95498 520 aa21.4■■□□□ 1.02
CLTA-202ENST00000345519 CLDN10P78369 228 aa21.4■■□□□ 1.02
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms