RNA–Protein interactions for RNA: ENST00000343483.6

HOXA9-201, Transcript of homeobox A9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXA9, Length 2,060 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA9-201ENST00000343483 PPP1R13LQ8WUF5 828 aa19.85■□□□□ 0.77
HOXA9-201ENST00000343483 CASKIN2Q8WXE0 1202 aa19.85■□□□□ 0.77
HOXA9-201ENST00000343483 RNPC3Q96LT9 517 aaKnown RBP19.85■□□□□ 0.77
HOXA9-201ENST00000343483 CARD9Q9H257 536 aa19.85■□□□□ 0.77
HOXA9-201ENST00000343483 EVPLQ92817 2033 aa19.85■□□□□ 0.77
HOXA9-201ENST00000343483 MIF4GDA9UHW6 222 aaKnown RBP19.85■□□□□ 0.77
HOXA9-201ENST00000343483 TRPA1O75762 1119 aa19.85■□□□□ 0.77
HOXA9-201ENST00000343483 ERLIN2O94905 339 aa19.85■□□□□ 0.77
HOXA9-201ENST00000343483 KRT19P08727 400 aa19.85■□□□□ 0.77
HOXA9-201ENST00000343483 MCF2P10911 925 aa19.85■□□□□ 0.77
HOXA9-201ENST00000343483 C2CD6Q53TS8 623 aa19.85■□□□□ 0.77
HOXA9-201ENST00000343483 PHLDB2Q86SQ0 1253 aa19.85■□□□□ 0.77
HOXA9-201ENST00000343483 KIAA0319LQ8IZA0 1049 aa19.85■□□□□ 0.77
HOXA9-201ENST00000343483 KRT35Q92764 455 aa19.85■□□□□ 0.77
HOXA9-201ENST00000343483 GINS2Q9Y248 185 aa19.85■□□□□ 0.77
HOXA9-201ENST00000343483 SPOPO43791 374 aa19.84■□□□□ 0.77
HOXA9-201ENST00000343483 CYP1A1P04798 512 aaPredicted RBP19.84■□□□□ 0.77
HOXA9-201ENST00000343483 NFICP08651 508 aa19.84■□□□□ 0.77
HOXA9-201ENST00000343483 ITGA4P13612 1032 aa19.84■□□□□ 0.77
HOXA9-201ENST00000343483 CAPN2P17655 700 aa19.84■□□□□ 0.77
HOXA9-201ENST00000343483 MARCKSL1P49006 195 aa19.84■□□□□ 0.77
HOXA9-201ENST00000343483 CENPCQ03188 943 aa19.84■□□□□ 0.77
HOXA9-201ENST00000343483 CCL14Q16627 93 aa19.84■□□□□ 0.77
HOXA9-201ENST00000343483 OLFML2BQ68BL8 750 aa19.84■□□□□ 0.77
HOXA9-201ENST00000343483 TLK2Q86UE8 772 aa19.84■□□□□ 0.77
HOXA9-201ENST00000343483 RPS6KC1Q96S38 1066 aa19.84■□□□□ 0.77
HOXA9-201ENST00000343483 ZSWIM1Q9BR11 485 aa19.84■□□□□ 0.77
HOXA9-201ENST00000343483 FAM49AQ9H0Q0 323 aaPredicted RBP19.84■□□□□ 0.77
HOXA9-201ENST00000343483 LACTBL1A8MY62 500 aa19.83■□□□□ 0.77
HOXA9-201ENST00000343483 HSF2BPO75031 334 aa19.83■□□□□ 0.77
HOXA9-201ENST00000343483 RRM1P23921 792 aa19.83■□□□□ 0.77
HOXA9-201ENST00000343483 TMEM62Q0P6H9 643 aa19.83■□□□□ 0.77
HOXA9-201ENST00000343483 KIZQ2M2Z5 673 aa19.83■□□□□ 0.77
HOXA9-201ENST00000343483 ZNF394Q53GI3 561 aa19.83■□□□□ 0.77
HOXA9-201ENST00000343483 ALS2CLQ60I27 953 aa19.83■□□□□ 0.77
HOXA9-201ENST00000343483 TRIM72Q6ZMU5 477 aa19.83■□□□□ 0.77
HOXA9-201ENST00000343483 TRIM11Q96F44 468 aa19.83■□□□□ 0.77
HOXA9-201ENST00000343483 DDX47Q9H0S4 455 aaKnown RBP19.83■□□□□ 0.77
HOXA9-201ENST00000343483 XYLT2Q9H1B5 865 aa19.83■□□□□ 0.77
HOXA9-201ENST00000343483 CISHQ9NSE2 258 aa19.83■□□□□ 0.77
HOXA9-201ENST00000343483 GNEQ9Y223 722 aaKnown RBP19.83■□□□□ 0.77
HOXA9-201ENST00000343483 A6NJR5 290 aa19.83■□□□□ 0.76
HOXA9-201ENST00000343483 TSPAN1O60635 241 aa19.83■□□□□ 0.76
HOXA9-201ENST00000343483 WEE2P0C1S8 567 aa19.83■□□□□ 0.76
HOXA9-201ENST00000343483 FAM153BP0C7A2 387 aa19.83■□□□□ 0.76
HOXA9-201ENST00000343483 MYBL1P10243 752 aa19.83■□□□□ 0.76
HOXA9-201ENST00000343483 CYP2B6P20813 491 aa19.83■□□□□ 0.76
HOXA9-201ENST00000343483 ZNF132P52740 706 aa19.83■□□□□ 0.76
HOXA9-201ENST00000343483 FAM153CQ494X1 144 aa19.83■□□□□ 0.76
HOXA9-201ENST00000343483 JADE1Q6IE81 842 aa19.83■□□□□ 0.76
HOXA9-201ENST00000343483 ADAT2Q7Z6V5 191 aaKnown RBP19.83■□□□□ 0.76
HOXA9-201ENST00000343483 CPNE8Q86YQ8 564 aa19.83■□□□□ 0.76
HOXA9-201ENST00000343483 UBR7Q8N806 425 aa19.83■□□□□ 0.76
HOXA9-201ENST00000343483 RUFY1Q96T51 708 aa19.83■□□□□ 0.76
HOXA9-201ENST00000343483 RNF186Q9NXI6 227 aa19.83■□□□□ 0.76
HOXA9-201ENST00000343483 NXF1Q9UBU9 619 aaKnown RBP19.83■□□□□ 0.76
HOXA9-201ENST00000343483 FAM153AQ9UHL3 310 aa19.83■□□□□ 0.76
HOXA9-201ENST00000343483 ANAPC7Q9UJX3 599 aa19.83■□□□□ 0.76
HOXA9-201ENST00000343483 TTC7AQ9ULT0 858 aaPredicted RBP19.83■□□□□ 0.76
HOXA9-201ENST00000343483 ZNF236Q9UL36 1845 aa19.83■□□□□ 0.76
HOXA9-201ENST00000343483 CCDC188H7C350 402 aa19.82■□□□□ 0.76
HOXA9-201ENST00000343483 FGFR4P22455 802 aa19.82■□□□□ 0.76
HOXA9-201ENST00000343483 TM4SF4P48230 202 aa19.82■□□□□ 0.76
HOXA9-201ENST00000343483 IRX5P78411 483 aaPredicted RBP19.82■□□□□ 0.76
HOXA9-201ENST00000343483 LLGL2Q6P1M3 1020 aa19.82■□□□□ 0.76
HOXA9-201ENST00000343483 MON1BQ7L1V2 547 aa19.82■□□□□ 0.76
HOXA9-201ENST00000343483 IFNL1Q8IU54 200 aa19.82■□□□□ 0.76
HOXA9-201ENST00000343483 C11orf70Q9BRQ4 267 aa19.82■□□□□ 0.76
HOXA9-201ENST00000343483 RRN3P2A6NIE6 340 aa19.82■□□□□ 0.76
HOXA9-201ENST00000343483 MEFVO15553 781 aaPredicted RBP19.82■□□□□ 0.76
HOXA9-201ENST00000343483 SART1O43290 800 aaKnown RBP19.82■□□□□ 0.76
HOXA9-201ENST00000343483 OPA1O60313 960 aa19.82■□□□□ 0.76
HOXA9-201ENST00000343483 ZNF865P0CJ78 1059 aaPredicted RBP19.82■□□□□ 0.76
HOXA9-201ENST00000343483 SMIM10L2AP0DMW4 78 aa19.82■□□□□ 0.76
HOXA9-201ENST00000343483 SMIM10L2BP0DMW5 78 aa19.82■□□□□ 0.76
HOXA9-201ENST00000343483 ASPAP45381 313 aa19.82■□□□□ 0.76
HOXA9-201ENST00000343483 GUCY2FP51841 1108 aa19.82■□□□□ 0.76
HOXA9-201ENST00000343483 NOMO3P69849 1222 aa19.82■□□□□ 0.76
HOXA9-201ENST00000343483 TRADDQ15628 312 aa19.82■□□□□ 0.76
HOXA9-201ENST00000343483 ZNF410Q86VK4 478 aa19.82■□□□□ 0.76
HOXA9-201ENST00000343483 TMEM130Q8N3G9 435 aa19.82■□□□□ 0.76
HOXA9-201ENST00000343483 ZNF606Q8WXB4 792 aa19.82■□□□□ 0.76
HOXA9-201ENST00000343483 NAP1L3Q99457 506 aaPredicted RBP19.82■□□□□ 0.76
HOXA9-201ENST00000343483 WNT8AQ9H1J5 351 aa19.82■□□□□ 0.76
HOXA9-201ENST00000343483 AVENQ9NQS1 362 aaPredicted RBP19.82■□□□□ 0.76
HOXA9-201ENST00000343483 GOLGA6CA6NDK9 693 aa19.81■□□□□ 0.76
HOXA9-201ENST00000343483 F2P00734 622 aa19.81■□□□□ 0.76
HOXA9-201ENST00000343483 GOLGA6DP0CG33 693 aa19.81■□□□□ 0.76
HOXA9-201ENST00000343483 HNRNPH2P55795 449 aaKnown RBP19.81■□□□□ 0.76
HOXA9-201ENST00000343483 AADACL2Q6P093 401 aa19.81■□□□□ 0.76
HOXA9-201ENST00000343483 C17orf99Q6UX52 265 aa19.81■□□□□ 0.76
HOXA9-201ENST00000343483 LEKR1Q6ZMV7 388 aa19.81■□□□□ 0.76
HOXA9-201ENST00000343483 C1orf127Q8N9H9 656 aa19.81■□□□□ 0.76
HOXA9-201ENST00000343483 WHAMMQ8TF30 809 aa19.81■□□□□ 0.76
HOXA9-201ENST00000343483 SH3GL2Q99962 352 aa19.81■□□□□ 0.76
HOXA9-201ENST00000343483 ADPGKQ9BRR6 497 aa19.81■□□□□ 0.76
HOXA9-201ENST00000343483 TRIM7Q9C029 511 aa19.81■□□□□ 0.76
HOXA9-201ENST00000343483 GOLGA6AQ9NYA3 693 aa19.81■□□□□ 0.76
HOXA9-201ENST00000343483 ADAM22Q9P0K1 906 aa19.81■□□□□ 0.76
HOXA9-201ENST00000343483 CALCOCO1Q9P1Z2 691 aa19.81■□□□□ 0.76
Retrieved 100 of 20,778 RNA–protein pairs in 63.1 ms