RNA–Protein interactions for RNA: ENST00000343366.8

CDHR4-201, Transcript of cadherin related family member 4, humanhuman

TSL 1 (best) BASIC

Gene CDHR4, Length 1,188 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDHR4-201ENST00000343366 FAM186AA6NE01 2351 aa20.21■□□□□ 0.83
CDHR4-201ENST00000343366 TMEM189-UBE2V1I3L0A0 370 aa20.2■□□□□ 0.82
CDHR4-201ENST00000343366 DDHD2O94830 711 aa20.2■□□□□ 0.82
CDHR4-201ENST00000343366 DLATP10515 647 aaKnown RBP20.2■□□□□ 0.82
CDHR4-201ENST00000343366 NDUFV1P49821 464 aa20.2■□□□□ 0.82
CDHR4-201ENST00000343366 VCPP55072 806 aaKnown RBP20.2■□□□□ 0.82
CDHR4-201ENST00000343366 BCAR1P56945 870 aa20.2■□□□□ 0.82
CDHR4-201ENST00000343366 KRT17Q04695 432 aa20.2■□□□□ 0.82
CDHR4-201ENST00000343366 SIGLEC14Q08ET2 396 aa20.2■□□□□ 0.82
CDHR4-201ENST00000343366 ANO6Q4KMQ2 910 aa20.2■□□□□ 0.82
CDHR4-201ENST00000343366 GLRA4Q5JXX5 417 aa20.2■□□□□ 0.82
CDHR4-201ENST00000343366 DCLRE1AQ6PJP8 1040 aa20.2■□□□□ 0.82
CDHR4-201ENST00000343366 COLGALT1Q8NBJ5 622 aa20.2■□□□□ 0.82
CDHR4-201ENST00000343366 SUSD6Q92537 303 aa20.2■□□□□ 0.82
CDHR4-201ENST00000343366 DNAJC25Q9H1X3 360 aa20.2■□□□□ 0.82
CDHR4-201ENST00000343366 SPG21Q9NZD8 308 aa20.2■□□□□ 0.82
CDHR4-201ENST00000343366 USP15Q9Y4E8 981 aaPredicted RBP20.2■□□□□ 0.82
CDHR4-201ENST00000343366 MEFVO15553 781 aaPredicted RBP20.19■□□□□ 0.82
CDHR4-201ENST00000343366 TRAPPC3O43617 180 aa20.19■□□□□ 0.82
CDHR4-201ENST00000343366 GALTP07902 379 aa20.19■□□□□ 0.82
CDHR4-201ENST00000343366 PNPLA4P41247 253 aa20.19■□□□□ 0.82
CDHR4-201ENST00000343366 OR1G1P47890 313 aa20.19■□□□□ 0.82
CDHR4-201ENST00000343366 ZNF165P49910 485 aa20.19■□□□□ 0.82
CDHR4-201ENST00000343366 AFF1P51825 1210 aaKnown RBP20.19■□□□□ 0.82
CDHR4-201ENST00000343366 TFAMQ00059 246 aaKnown RBP20.19■□□□□ 0.82
CDHR4-201ENST00000343366 UBE3AQ05086 875 aa20.19■□□□□ 0.82
CDHR4-201ENST00000343366 ELAVL2Q12926 359 aaKnown RBP20.19■□□□□ 0.82
CDHR4-201ENST00000343366 LRSAM1Q6UWE0 723 aa20.19■□□□□ 0.82
CDHR4-201ENST00000343366 ZNF280BQ86YH2 543 aa20.19■□□□□ 0.82
CDHR4-201ENST00000343366 CCDC127Q96BQ5 260 aa20.19■□□□□ 0.82
CDHR4-201ENST00000343366 BORCS6Q96GS4 357 aa20.19■□□□□ 0.82
CDHR4-201ENST00000343366 DPP3Q9NY33 737 aa20.19■□□□□ 0.82
CDHR4-201ENST00000343366 CACNA1AO00555 2505 aa20.18■□□□□ 0.82
CDHR4-201ENST00000343366 ARHGEF37A1IGU5 675 aa20.18■□□□□ 0.82
CDHR4-201ENST00000343366 N4BP1O75113 896 aaKnown RBP20.18■□□□□ 0.82
CDHR4-201ENST00000343366 NFICP08651 508 aa20.18■□□□□ 0.82
CDHR4-201ENST00000343366 TPM4P67936 248 aa20.18■□□□□ 0.82
CDHR4-201ENST00000343366 PLCB3Q01970 1234 aa20.18■□□□□ 0.82
CDHR4-201ENST00000343366 SPAG1Q07617 926 aa20.18■□□□□ 0.82
CDHR4-201ENST00000343366 BMS1Q14692 1282 aaKnown RBP20.18■□□□□ 0.82
CDHR4-201ENST00000343366 UPP1Q16831 310 aa20.18■□□□□ 0.82
CDHR4-201ENST00000343366 C11orf57Q6ZUT1 292 aaPredicted RBP20.18■□□□□ 0.82
CDHR4-201ENST00000343366 SUGP1Q8IWZ8 645 aaKnown RBP20.18■□□□□ 0.82
CDHR4-201ENST00000343366 EFCAB13Q8IY85 973 aa20.18■□□□□ 0.82
CDHR4-201ENST00000343366 ANKRD20A12PQ8NF67 263 aa20.18■□□□□ 0.82
CDHR4-201ENST00000343366 TMEM169Q96HH4 297 aa20.18■□□□□ 0.82
CDHR4-201ENST00000343366 ZNF560Q96MR9 790 aa20.18■□□□□ 0.82
CDHR4-201ENST00000343366 PHF7Q9BWX1 381 aaPredicted RBP20.18■□□□□ 0.82
CDHR4-201ENST00000343366 PUF60Q9UHX1 559 aaKnown RBP20.18■□□□□ 0.82
CDHR4-201ENST00000343366 BARX2Q9UMQ3 279 aaPredicted RBP20.18■□□□□ 0.82
CDHR4-201ENST00000343366 LZTS1Q9Y250 596 aa20.18■□□□□ 0.82
CDHR4-201ENST00000343366 NFE2L3Q9Y4A8 694 aa20.18■□□□□ 0.82
CDHR4-201ENST00000343366 BECN2A8MW95 431 aa20.17■□□□□ 0.82
CDHR4-201ENST00000343366 NRP1O14786 923 aa20.17■□□□□ 0.82
CDHR4-201ENST00000343366 GFRA3O60609 400 aa20.17■□□□□ 0.82
CDHR4-201ENST00000343366 TPM2P07951 284 aa20.17■□□□□ 0.82
CDHR4-201ENST00000343366 EEF1GP26641 437 aaKnown RBP20.17■□□□□ 0.82
CDHR4-201ENST00000343366 ZNF445P59923 1031 aa20.17■□□□□ 0.82
CDHR4-201ENST00000343366 RBP5P82980 135 aa20.17■□□□□ 0.82
CDHR4-201ENST00000343366 CETN1Q12798 172 aa20.17■□□□□ 0.82
CDHR4-201ENST00000343366 KLHL23Q8NBE8 558 aa20.17■□□□□ 0.82
CDHR4-201ENST00000343366 VN1R2Q8NFZ6 395 aa20.17■□□□□ 0.82
CDHR4-201ENST00000343366 DNAJB4Q9UDY4 337 aa20.17■□□□□ 0.82
CDHR4-201ENST00000343366 PCDHGC5Q9Y5F6 944 aa20.17■□□□□ 0.82
CDHR4-201ENST00000343366 GVINP1Q7Z2Y8 2422 aa20.16■□□□□ 0.82
CDHR4-201ENST00000343366 ANO9A1A5B4 782 aa20.16■□□□□ 0.82
CDHR4-201ENST00000343366 LRRIQ3A6PVS8 624 aaPredicted RBP20.16■□□□□ 0.82
CDHR4-201ENST00000343366 PROB1E7EW31 1015 aa20.16■□□□□ 0.82
CDHR4-201ENST00000343366 TULP1O00294 542 aaPredicted RBP20.16■□□□□ 0.82
CDHR4-201ENST00000343366 PODXLO00592 558 aa20.16■□□□□ 0.82
CDHR4-201ENST00000343366 PMM2O15305 246 aa20.16■□□□□ 0.82
CDHR4-201ENST00000343366 CSPG5O95196 566 aa20.16■□□□□ 0.82
CDHR4-201ENST00000343366 AVPR2P30518 371 aa20.16■□□□□ 0.82
CDHR4-201ENST00000343366 NRIP1P48552 1158 aa20.16■□□□□ 0.82
CDHR4-201ENST00000343366 SLC11A1P49279 550 aa20.16■□□□□ 0.82
CDHR4-201ENST00000343366 MYO1EQ12965 1108 aa20.16■□□□□ 0.82
CDHR4-201ENST00000343366 KCNC3Q14003 757 aa20.16■□□□□ 0.82
CDHR4-201ENST00000343366 SLC39A11Q8N1S5 342 aa20.16■□□□□ 0.82
CDHR4-201ENST00000343366 LRRC52Q8N7C0 313 aa20.16■□□□□ 0.82
CDHR4-201ENST00000343366 POF1BQ8WVV4 589 aa20.16■□□□□ 0.82
CDHR4-201ENST00000343366 PPP2R3CQ969Q6 453 aa20.16■□□□□ 0.82
CDHR4-201ENST00000343366 C18orf25Q96B23 403 aaPredicted RBP20.16■□□□□ 0.82
CDHR4-201ENST00000343366 EEF2KMTQ96G04 330 aa20.16■□□□□ 0.82
CDHR4-201ENST00000343366 IGSF21Q96ID5 467 aa20.16■□□□□ 0.82
CDHR4-201ENST00000343366 CNOT6LQ96LI5 555 aaKnown RBP20.16■□□□□ 0.82
CDHR4-201ENST00000343366 MED15Q96RN5 788 aa20.16■□□□□ 0.82
CDHR4-201ENST00000343366 TMEM8AQ9HCN3 771 aa20.16■□□□□ 0.82
CDHR4-201ENST00000343366 FAM86C1Q9NVL1 165 aa20.16■□□□□ 0.82
CDHR4-201ENST00000343366 ADAM28Q9UKQ2 775 aa20.16■□□□□ 0.82
CDHR4-201ENST00000343366 DMXL1Q9Y485 3027 aa20.16■□□□□ 0.82
CDHR4-201ENST00000343366 ZNF292O60281 2723 aa20.16■□□□□ 0.82
CDHR4-201ENST00000343366 CASTOR2A6NHX0 329 aa20.15■□□□□ 0.82
CDHR4-201ENST00000343366 PIRO00625 290 aa20.15■□□□□ 0.82
CDHR4-201ENST00000343366 P4HA2O15460 535 aa20.15■□□□□ 0.82
CDHR4-201ENST00000343366 PHACTR2O75167 634 aa20.15■□□□□ 0.82
CDHR4-201ENST00000343366 TADA2AO75478 443 aa20.15■□□□□ 0.82
CDHR4-201ENST00000343366 B3GAT3O94766 335 aa20.15■□□□□ 0.82
CDHR4-201ENST00000343366 ATICP31939 592 aa20.15■□□□□ 0.82
CDHR4-201ENST00000343366 CLCNKBP51801 687 aa20.15■□□□□ 0.82
CDHR4-201ENST00000343366 SOX4Q06945 474 aaPredicted RBP20.15■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms