RNA–Protein interactions for RNA: ENST00000343256.9

MUC1-204, Transcript of mucin 1, cell surface associated, humanhuman

TSL 1 (best) BASIC

Gene MUC1, Length 648 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MUC1-204ENST00000343256 AKAP13Q12802 2813 aa19.45■□□□□ 0.7
MUC1-204ENST00000343256 LAMA1P25391 3075 aa19.45■□□□□ 0.7
MUC1-204ENST00000343256 FAM205CA6NFA0 338 aa19.44■□□□□ 0.7
MUC1-204ENST00000343256 ACKR2O00590 384 aa19.44■□□□□ 0.7
MUC1-204ENST00000343256 SYN3O14994 580 aa19.44■□□□□ 0.7
MUC1-204ENST00000343256 DCLK1O15075 740 aa19.44■□□□□ 0.7
MUC1-204ENST00000343256 TMC8Q8IU68 726 aa19.44■□□□□ 0.7
MUC1-204ENST00000343256 CEP120Q8N960 986 aa19.44■□□□□ 0.7
MUC1-204ENST00000343256 COL26A1Q96A83 441 aa19.44■□□□□ 0.7
MUC1-204ENST00000343256 LARP6Q9BRS8 491 aaKnown RBP19.44■□□□□ 0.7
MUC1-204ENST00000343256 KIFC3Q9BVG8 833 aa19.44■□□□□ 0.7
MUC1-204ENST00000343256 LRRC3Q9BY71 257 aa19.44■□□□□ 0.7
MUC1-204ENST00000343256 CCDC113Q9H0I3 377 aa19.44■□□□□ 0.7
MUC1-204ENST00000343256 DUSP15Q9H1R2 295 aaPredicted RBP19.44■□□□□ 0.7
MUC1-204ENST00000343256 C2orf40Q9H1Z8 148 aa19.44■□□□□ 0.7
MUC1-204ENST00000343256 GJB4Q9NTQ9 266 aa19.44■□□□□ 0.7
MUC1-204ENST00000343256 YIPF1Q9Y548 306 aa19.44■□□□□ 0.7
MUC1-204ENST00000343256 CCDC163A0A0D9SF12 145 aa19.43■□□□□ 0.7
MUC1-204ENST00000343256 DPYSL4O14531 572 aa19.43■□□□□ 0.7
MUC1-204ENST00000343256 CPLX1O14810 134 aa19.43■□□□□ 0.7
MUC1-204ENST00000343256 DTNBO60941 627 aa19.43■□□□□ 0.7
MUC1-204ENST00000343256 CPB1P15086 417 aa19.43■□□□□ 0.7
MUC1-204ENST00000343256 ATP2B1P20020 1258 aa19.43■□□□□ 0.7
MUC1-204ENST00000343256 DCAF4L1Q3SXM0 396 aa19.43■□□□□ 0.7
MUC1-204ENST00000343256 ARHGAP29Q52LW3 1261 aa19.43■□□□□ 0.7
MUC1-204ENST00000343256 DAB2IPQ5VWQ8 1189 aa19.43■□□□□ 0.7
MUC1-204ENST00000343256 KCNB2Q92953 911 aa19.43■□□□□ 0.7
MUC1-204ENST00000343256 HHIPQ96QV1 700 aa19.43■□□□□ 0.7
MUC1-204ENST00000343256 MKNK1Q9BUB5 465 aa19.43■□□□□ 0.7
MUC1-204ENST00000343256 NUB1Q9Y5A7 615 aa19.43■□□□□ 0.7
MUC1-204ENST00000343256 LNP1A1A4G5 178 aa19.42■□□□□ 0.7
MUC1-204ENST00000343256 AKAP3O75969 853 aa19.42■□□□□ 0.7
MUC1-204ENST00000343256 CAVIN2O95810 425 aa19.42■□□□□ 0.7
MUC1-204ENST00000343256 EVCP57679 992 aa19.42■□□□□ 0.7
MUC1-204ENST00000343256 OSTNP61366 133 aa19.42■□□□□ 0.7
MUC1-204ENST00000343256 NT5DC1Q5TFE4 455 aa19.42■□□□□ 0.7
MUC1-204ENST00000343256 ZNF280DQ6N043 979 aa19.42■□□□□ 0.7
MUC1-204ENST00000343256 HAUS6Q7Z4H7 955 aa19.42■□□□□ 0.7
MUC1-204ENST00000343256 SKAP1Q86WV1 359 aa19.42■□□□□ 0.7
MUC1-204ENST00000343256 ZMAT2Q96NC0 199 aaKnown RBP19.42■□□□□ 0.7
MUC1-204ENST00000343256 PGLYRP2Q96PD5 576 aa19.42■□□□□ 0.7
MUC1-204ENST00000343256 TMEM209Q96SK2 561 aa19.42■□□□□ 0.7
MUC1-204ENST00000343256 DNAJC25Q9H1X3 360 aa19.42■□□□□ 0.7
MUC1-204ENST00000343256 POLD4Q9HCU8 107 aa19.42■□□□□ 0.7
MUC1-204ENST00000343256 PCDHA12Q9UN75 941 aa19.42■□□□□ 0.7
MUC1-204ENST00000343256 VNN2O95498 520 aa19.41■□□□□ 0.7
MUC1-204ENST00000343256 OR4Q2P0C623 313 aa19.41■□□□□ 0.7
MUC1-204ENST00000343256 CACNB1Q02641 598 aaPredicted RBP19.41■□□□□ 0.7
MUC1-204ENST00000343256 STK3Q13188 491 aa19.41■□□□□ 0.7
MUC1-204ENST00000343256 ATF7IP2Q5U623 682 aa19.41■□□□□ 0.7
MUC1-204ENST00000343256 FSTL4Q6MZW2 842 aa19.41■□□□□ 0.7
MUC1-204ENST00000343256 MCPH1Q8NEM0 835 aa19.41■□□□□ 0.7
MUC1-204ENST00000343256 DEPTORQ8TB45 409 aa19.41■□□□□ 0.7
MUC1-204ENST00000343256 NAP1L4Q99733 375 aaKnown RBP19.41■□□□□ 0.7
MUC1-204ENST00000343256 CRISPLD1Q9H336 500 aa19.41■□□□□ 0.7
MUC1-204ENST00000343256 NUP210Q8TEM1 1887 aaPredicted RBP19.4■□□□□ 0.7
MUC1-204ENST00000343256 TAF4O00268 1085 aa19.4■□□□□ 0.7
MUC1-204ENST00000343256 PRAMEF12O95522 483 aa19.4■□□□□ 0.7
MUC1-204ENST00000343256 CEACAM1P13688 526 aa19.4■□□□□ 0.7
MUC1-204ENST00000343256 TOB2Q14106 344 aaPredicted RBP19.4■□□□□ 0.7
MUC1-204ENST00000343256 DEFB124Q8NES8 71 aa19.4■□□□□ 0.7
MUC1-204ENST00000343256 DDX12PQ92771 950 aa19.4■□□□□ 0.7
MUC1-204ENST00000343256 C18orf25Q96B23 403 aaPredicted RBP19.4■□□□□ 0.7
MUC1-204ENST00000343256 TTC12Q9H892 705 aaPredicted RBP19.4■□□□□ 0.7
MUC1-204ENST00000343256 BCLAF3A2AJT9 711 aaKnown RBP19.39■□□□□ 0.69
MUC1-204ENST00000343256 HYAL3O43820 417 aaPredicted RBP19.39■□□□□ 0.69
MUC1-204ENST00000343256 RNF40O75150 1001 aa19.39■□□□□ 0.69
MUC1-204ENST00000343256 MCM4P33991 863 aa19.39■□□□□ 0.69
MUC1-204ENST00000343256 TXKP42681 527 aa19.39■□□□□ 0.69
MUC1-204ENST00000343256 YARSP54577 528 aaKnown RBP19.39■□□□□ 0.69
MUC1-204ENST00000343256 ELF2Q15723 593 aa19.39■□□□□ 0.69
MUC1-204ENST00000343256 UAP1L1Q3KQV9 507 aa19.39■□□□□ 0.69
MUC1-204ENST00000343256 GPR158Q5T848 1215 aa19.39■□□□□ 0.69
MUC1-204ENST00000343256 ALKAL1Q6UXT8 129 aa19.39■□□□□ 0.69
MUC1-204ENST00000343256 GAREM2Q75VX8 874 aa19.39■□□□□ 0.69
MUC1-204ENST00000343256 FAM177A1Q8N128 213 aaPredicted RBP19.39■□□□□ 0.69
MUC1-204ENST00000343256 TMEM130Q8N3G9 435 aa19.39■□□□□ 0.69
MUC1-204ENST00000343256 BPIFB1Q8TDL5 484 aa19.39■□□□□ 0.69
MUC1-204ENST00000343256 SUSD3Q96L08 255 aa19.39■□□□□ 0.69
MUC1-204ENST00000343256 SMG9Q9H0W8 520 aaKnown RBP19.39■□□□□ 0.69
MUC1-204ENST00000343256 ATXN3LQ9H3M9 355 aa19.39■□□□□ 0.69
MUC1-204ENST00000343256 TMEM9BQ9NQ34 198 aa19.39■□□□□ 0.69
MUC1-204ENST00000343256 INVSQ9Y283 1065 aa19.39■□□□□ 0.69
MUC1-204ENST00000343256 PATE3B3GLJ2 98 aa19.38■□□□□ 0.69
MUC1-204ENST00000343256 ATG13O75143 517 aa19.38■□□□□ 0.69
MUC1-204ENST00000343256 RHOBTB1O94844 696 aa19.38■□□□□ 0.69
MUC1-204ENST00000343256 EGFP01133 1207 aa19.38■□□□□ 0.69
MUC1-204ENST00000343256 SPATA31C1P0DKV0 1188 aa19.38■□□□□ 0.69
MUC1-204ENST00000343256 CSRP1P21291 193 aaKnown RBP19.38■□□□□ 0.69
MUC1-204ENST00000343256 HSPA4P34932 840 aa19.38■□□□□ 0.69
MUC1-204ENST00000343256 NAMPTP43490 491 aa19.38■□□□□ 0.69
MUC1-204ENST00000343256 DUSP4Q13115 394 aa19.38■□□□□ 0.69
MUC1-204ENST00000343256 CALCRLQ16602 461 aa19.38■□□□□ 0.69
MUC1-204ENST00000343256 ITPRIPL2Q3MIP1 535 aa19.38■□□□□ 0.69
MUC1-204ENST00000343256 XKR4Q5GH76 650 aa19.38■□□□□ 0.69
MUC1-204ENST00000343256 TMEM196Q5HYL7 178 aa19.38■□□□□ 0.69
MUC1-204ENST00000343256 NUP205Q92621 2012 aa19.38■□□□□ 0.69
MUC1-204ENST00000343256 CHFRQ96EP1 664 aa19.38■□□□□ 0.69
MUC1-204ENST00000343256 TBC1D32Q96NH3 1257 aa19.38■□□□□ 0.69
MUC1-204ENST00000343256 CCDC94Q9BW85 323 aaPredicted RBP19.38■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms