RNA–Protein interactions for RNA: ENST00000343200.9

VCAN-203, Transcript of versican, humanhuman

TSL 1 (best) BASIC

Gene VCAN, Length 9,455 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAN-203ENST00000343200 RALGDSQ12967 914 aa6.44□□□□□ -1.38
VCAN-203ENST00000343200 NAALADL2Q58DX5 795 aa6.44□□□□□ -1.38
VCAN-203ENST00000343200 SLC9A4Q6AI14 798 aa6.44□□□□□ -1.38
VCAN-203ENST00000343200 PEG10Q86TG7 708 aaKnown RBP6.44□□□□□ -1.38
VCAN-203ENST00000343200 TMEM51Q9NW97 253 aa6.44□□□□□ -1.38
VCAN-203ENST00000343200 EFCAB10A6NFE3 127 aa6.44□□□□□ -1.38
VCAN-203ENST00000343200 FAM187AA6NFU0 413 aa6.44□□□□□ -1.38
VCAN-203ENST00000343200 ATP6V1G1O75348 118 aa6.44□□□□□ -1.38
VCAN-203ENST00000343200 GAP43P17677 238 aa6.44□□□□□ -1.38
VCAN-203ENST00000343200 IL12AP29459 219 aa6.44□□□□□ -1.38
VCAN-203ENST00000343200 RPL19P84098 196 aaKnown RBP6.44□□□□□ -1.38
VCAN-203ENST00000343200 TOP3AQ13472 1001 aaPredicted RBP6.44□□□□□ -1.38
VCAN-203ENST00000343200 GPIHBP1Q8IV16 184 aa6.44□□□□□ -1.38
VCAN-203ENST00000343200 CHERPQ8IWX8 916 aaKnown RBP6.44□□□□□ -1.38
VCAN-203ENST00000343200 SYTL1Q8IYJ3 562 aa6.44□□□□□ -1.38
VCAN-203ENST00000343200 GALNT6Q8NCL4 622 aa6.44□□□□□ -1.38
VCAN-203ENST00000343200 VPS37AQ8NEZ2 397 aa6.44□□□□□ -1.38
VCAN-203ENST00000343200 RNFT2Q96EX2 444 aa6.44□□□□□ -1.38
VCAN-203ENST00000343200 TEX13AQ9BXU3 409 aaPredicted RBP6.44□□□□□ -1.38
VCAN-203ENST00000343200 CHPF2Q9P2E5 772 aa6.44□□□□□ -1.38
VCAN-203ENST00000343200 TMEM120BA0PK00 339 aa6.43□□□□□ -1.38
VCAN-203ENST00000343200 TRPC5OSA6NMA1 111 aa6.43□□□□□ -1.38
VCAN-203ENST00000343200 PEX1O43933 1283 aa6.43□□□□□ -1.38
VCAN-203ENST00000343200 SRP72O76094 671 aaKnown RBP6.43□□□□□ -1.38
VCAN-203ENST00000343200 FSBPO95073 299 aa6.43□□□□□ -1.38
VCAN-203ENST00000343200 LPIN1Q14693 890 aa6.43□□□□□ -1.38
VCAN-203ENST00000343200 LBRQ14739 615 aaKnown RBP6.43□□□□□ -1.38
VCAN-203ENST00000343200 TMEM132EQ6IEE7 984 aa6.43□□□□□ -1.38
VCAN-203ENST00000343200 TAB3Q8N5C8 712 aaPredicted RBP6.43□□□□□ -1.38
VCAN-203ENST00000343200 MYCBPAPQ8TBZ2 947 aa6.43□□□□□ -1.38
VCAN-203ENST00000343200 PROX1Q92786 737 aa6.43□□□□□ -1.38
VCAN-203ENST00000343200 TCEAL3Q969E4 200 aa6.43□□□□□ -1.38
VCAN-203ENST00000343200 TSPAN17Q96FV3 270 aa6.43□□□□□ -1.38
VCAN-203ENST00000343200 NT5C1BQ96P26 610 aa6.43□□□□□ -1.38
VCAN-203ENST00000343200 MMS19Q96T76 1030 aa6.43□□□□□ -1.38
VCAN-203ENST00000343200 NUP85Q9BW27 656 aa6.43□□□□□ -1.38
VCAN-203ENST00000343200 MANSC1Q9H8J5 431 aa6.43□□□□□ -1.38
VCAN-203ENST00000343200 STOX2Q9P2F5 926 aaPredicted RBP6.43□□□□□ -1.38
VCAN-203ENST00000343200 UBE2QL1A1L167 161 aa6.43□□□□□ -1.38
VCAN-203ENST00000343200 GOLGA8SH3BPF8 625 aa6.43□□□□□ -1.38
VCAN-203ENST00000343200 ENO2P09104 434 aaPredicted RBP6.43□□□□□ -1.38
VCAN-203ENST00000343200 PSMC2P35998 433 aaKnown RBP6.43□□□□□ -1.38
VCAN-203ENST00000343200 PLA2G4AP47712 749 aa6.43□□□□□ -1.38
VCAN-203ENST00000343200 NUDT2P50583 147 aa6.43□□□□□ -1.38
VCAN-203ENST00000343200 CHN2P52757 468 aa6.43□□□□□ -1.38
VCAN-203ENST00000343200 NCKAP1LP55160 1127 aa6.43□□□□□ -1.38
VCAN-203ENST00000343200 KCNQ4P56696 695 aa6.43□□□□□ -1.38
VCAN-203ENST00000343200 RYBPQ8N488 228 aaPredicted RBP6.43□□□□□ -1.38
VCAN-203ENST00000343200 TSPYL6Q8N831 410 aa6.43□□□□□ -1.38
VCAN-203ENST00000343200 ULK4Q96C45 1275 aa6.43□□□□□ -1.38
VCAN-203ENST00000343200 PPP1R36Q96LQ0 422 aa6.43□□□□□ -1.38
VCAN-203ENST00000343200 FOXP1Q9H334 677 aaPredicted RBP6.43□□□□□ -1.38
VCAN-203ENST00000343200 DNAJC11Q9NVH1 559 aa6.43□□□□□ -1.38
VCAN-203ENST00000343200 SLC12A4Q9UP95 1085 aa6.43□□□□□ -1.38
VCAN-203ENST00000343200 RUVBL2Q9Y230 463 aaKnown RBP6.43□□□□□ -1.38
VCAN-203ENST00000343200 RUSC2Q8N2Y8 1516 aa6.43□□□□□ -1.38
VCAN-203ENST00000343200 NUP160Q12769 1436 aa6.43□□□□□ -1.38
VCAN-203ENST00000343200 MROH7Q68CQ1 1323 aa6.43□□□□□ -1.38
VCAN-203ENST00000343200 PCDH11YQ9BZA8 1340 aa6.43□□□□□ -1.38
VCAN-203ENST00000343200 MEI4A8MW99 385 aa6.43□□□□□ -1.38
VCAN-203ENST00000343200 UBAP1LF5GYI3 381 aa6.43□□□□□ -1.38
VCAN-203ENST00000343200 SPAG6O75602 509 aa6.43□□□□□ -1.38
VCAN-203ENST00000343200 HADHAP40939 763 aa6.43□□□□□ -1.38
VCAN-203ENST00000343200 RXRGP48443 463 aa6.43□□□□□ -1.38
VCAN-203ENST00000343200 BRDTQ58F21 947 aaPredicted RBP6.43□□□□□ -1.38
VCAN-203ENST00000343200 ZNF57Q68EA5 555 aaPredicted RBP6.43□□□□□ -1.38
VCAN-203ENST00000343200 DYMQ7RTS9 669 aa6.43□□□□□ -1.38
VCAN-203ENST00000343200 WNK4Q96J92 1243 aa6.43□□□□□ -1.38
VCAN-203ENST00000343200 ZNF221Q9UK13 617 aa6.43□□□□□ -1.38
VCAN-203ENST00000343200 DENND2AQ9ULE3 1009 aa6.43□□□□□ -1.38
VCAN-203ENST00000343200 TRIM64A6NGJ6 449 aa6.43□□□□□ -1.38
VCAN-203ENST00000343200 TRIM64BA6NI03 449 aa6.43□□□□□ -1.38
VCAN-203ENST00000343200 RTN3O95197 1032 aaPredicted RBP6.43□□□□□ -1.38
VCAN-203ENST00000343200 RPS6KA3P51812 740 aa6.43□□□□□ -1.38
VCAN-203ENST00000343200 NSUN2Q08J23 767 aaKnown RBP eCLIP6.43□□□□□ -1.38
VCAN-203ENST00000343200 TPH2Q8IWU9 490 aa6.43□□□□□ -1.38
VCAN-203ENST00000343200 OR8H3Q8N146 312 aa6.43□□□□□ -1.38
VCAN-203ENST00000343200 LCORLQ8N3X6 602 aa6.43□□□□□ -1.38
VCAN-203ENST00000343200 SPATA5Q8NB90 893 aa6.43□□□□□ -1.38
VCAN-203ENST00000343200 GRIP2Q9C0E4 1043 aa6.43□□□□□ -1.38
VCAN-203ENST00000343200 TRNAU1APQ9NX07 287 aaKnown RBP6.43□□□□□ -1.38
VCAN-203ENST00000343200 ZNF222Q9UK12 451 aa6.43□□□□□ -1.38
VCAN-203ENST00000343200 PI4K2BG5E9Z4 385 aa6.43□□□□□ -1.38
VCAN-203ENST00000343200 TEX46H3BTG2 121 aa6.43□□□□□ -1.38
VCAN-203ENST00000343200 LDHAP00338 332 aaKnown RBP6.43□□□□□ -1.38
VCAN-203ENST00000343200 OR52Z1P0C646 297 aa6.43□□□□□ -1.38
VCAN-203ENST00000343200 RRM2P31350 389 aa6.43□□□□□ -1.38
VCAN-203ENST00000343200 RFC5P40937 340 aa6.43□□□□□ -1.38
VCAN-203ENST00000343200 NCALDP61601 193 aa6.43□□□□□ -1.38
VCAN-203ENST00000343200 HPCAP84074 193 aa6.43□□□□□ -1.38
VCAN-203ENST00000343200 PDIA2Q13087 525 aaKnown RBP6.43□□□□□ -1.38
VCAN-203ENST00000343200 ZC2HC1CQ53FD0 456 aaPredicted RBP6.43□□□□□ -1.38
VCAN-203ENST00000343200 TNFAIP8L3Q5GJ75 292 aa6.43□□□□□ -1.38
VCAN-203ENST00000343200 PACS2Q86VP3 889 aa6.43□□□□□ -1.38
VCAN-203ENST00000343200 BORCS5Q969J3 196 aa6.43□□□□□ -1.38
VCAN-203ENST00000343200 CHCHD6Q9BRQ6 235 aa6.43□□□□□ -1.38
VCAN-203ENST00000343200 DCUN1D5Q9BTE7 237 aa6.43□□□□□ -1.38
VCAN-203ENST00000343200 SLC12A6Q9UHW9 1150 aa6.43□□□□□ -1.38
VCAN-203ENST00000343200 CCDC189A1A4V9 331 aa6.43□□□□□ -1.38
VCAN-203ENST00000343200 PEX14O75381 377 aa6.43□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms