RNA–Protein interactions for RNA: ENST00000341372.7

TPM3-207, Transcript of tropomyosin 3, humanhuman

TSL 5 BASIC

Gene TPM3, Length 2,007 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-207ENST00000341372 ZPBP2Q6X784 338 aa11.21□□□□□ -0.62
TPM3-207ENST00000341372 HAUS6Q7Z4H7 955 aa11.21□□□□□ -0.62
TPM3-207ENST00000341372 PDILTQ8N807 584 aa11.21□□□□□ -0.62
TPM3-207ENST00000341372 GSTCDQ8NEC7 633 aa11.21□□□□□ -0.62
TPM3-207ENST00000341372 THAP3Q8WTV1 239 aaPredicted RBP11.21□□□□□ -0.62
TPM3-207ENST00000341372 RHOVQ96L33 236 aa11.21□□□□□ -0.62
TPM3-207ENST00000341372 ZNF558Q96NG5 402 aa11.21□□□□□ -0.62
TPM3-207ENST00000341372 TARS2Q9BW92 718 aaKnown RBP11.21□□□□□ -0.62
TPM3-207ENST00000341372 CDT1Q9H211 546 aa11.21□□□□□ -0.62
TPM3-207ENST00000341372 NRDE2Q9H7Z3 1164 aa11.21□□□□□ -0.62
TPM3-207ENST00000341372 USP20Q9Y2K6 914 aa11.21□□□□□ -0.62
TPM3-207ENST00000341372 RPS6KL1Q9Y6S9 549 aa11.21□□□□□ -0.62
TPM3-207ENST00000341372 CITO14578 2027 aa11.2□□□□□ -0.62
TPM3-207ENST00000341372 TRIP11Q15643 1979 aa11.2□□□□□ -0.62
TPM3-207ENST00000341372 SERTM1A2A2V5 107 aa11.2□□□□□ -0.62
TPM3-207ENST00000341372 ARL5CA6NH57 179 aa11.2□□□□□ -0.62
TPM3-207ENST00000341372 K7ENM7 598 aa11.2□□□□□ -0.62
TPM3-207ENST00000341372 B4GALT3O60512 393 aa11.2□□□□□ -0.62
TPM3-207ENST00000341372 FGF18O76093 207 aa11.2□□□□□ -0.62
TPM3-207ENST00000341372 SCGB1D2O95969 90 aa11.2□□□□□ -0.62
TPM3-207ENST00000341372 GAP43P17677 238 aa11.2□□□□□ -0.62
TPM3-207ENST00000341372 LIG1P18858 919 aa11.2□□□□□ -0.62
TPM3-207ENST00000341372 MLH1P40692 756 aa11.2□□□□□ -0.62
TPM3-207ENST00000341372 GTF2BQ00403 316 aa11.2□□□□□ -0.62
TPM3-207ENST00000341372 STRN3Q13033 797 aa11.2□□□□□ -0.62
TPM3-207ENST00000341372 SPOUT1Q5T280 376 aaKnown RBP11.2□□□□□ -0.62
TPM3-207ENST00000341372 ADALQ6DHV7 355 aa11.2□□□□□ -0.62
TPM3-207ENST00000341372 FAM178BQ8IXR5 827 aa11.2□□□□□ -0.62
TPM3-207ENST00000341372 MYCT1Q8N699 235 aa11.2□□□□□ -0.62
TPM3-207ENST00000341372 IQUBQ8NA54 791 aa11.2□□□□□ -0.62
TPM3-207ENST00000341372 HVCN1Q96D96 273 aa11.2□□□□□ -0.62
TPM3-207ENST00000341372 ARPC5LQ9BPX5 153 aa11.2□□□□□ -0.62
TPM3-207ENST00000341372 PYM1Q9BRP8 204 aaKnown RBP11.2□□□□□ -0.62
TPM3-207ENST00000341372 TMEM175Q9BSA9 504 aa11.2□□□□□ -0.62
TPM3-207ENST00000341372 STRA6Q9BX79 667 aa11.2□□□□□ -0.62
TPM3-207ENST00000341372 RBSNQ9H1K0 784 aa11.2□□□□□ -0.62
TPM3-207ENST00000341372 OLFML3Q9NRN5 406 aa11.2□□□□□ -0.62
TPM3-207ENST00000341372 FAM13BQ9NYF5 915 aa11.2□□□□□ -0.62
TPM3-207ENST00000341372 REV3LO60673 3130 aa11.2□□□□□ -0.62
TPM3-207ENST00000341372 PDCD11Q14690 1871 aaKnown RBP11.2□□□□□ -0.62
TPM3-207ENST00000341372 GREM1O60565 184 aa11.19□□□□□ -0.62
TPM3-207ENST00000341372 TOM1L1O75674 476 aa11.19□□□□□ -0.62
TPM3-207ENST00000341372 RECQL4O94761 1208 aa11.19□□□□□ -0.62
TPM3-207ENST00000341372 MCF2P10911 925 aa11.19□□□□□ -0.62
TPM3-207ENST00000341372 CMA1P23946 247 aa11.19□□□□□ -0.62
TPM3-207ENST00000341372 DNAJB1P25685 340 aa11.19□□□□□ -0.62
TPM3-207ENST00000341372 GRM5P41594 1212 aa11.19□□□□□ -0.62
TPM3-207ENST00000341372 BCAR1P56945 870 aa11.19□□□□□ -0.62
TPM3-207ENST00000341372 MPZL3Q6UWV2 235 aa11.19□□□□□ -0.62
TPM3-207ENST00000341372 DYMQ7RTS9 669 aa11.19□□□□□ -0.62
TPM3-207ENST00000341372 C14orf80Q86SX3 495 aa11.19□□□□□ -0.62
TPM3-207ENST00000341372 SFR1Q86XK3 245 aa11.19□□□□□ -0.62
TPM3-207ENST00000341372 MAP4K3Q8IVH8 894 aa11.19□□□□□ -0.62
TPM3-207ENST00000341372 C3orf58Q8NDZ4 430 aa11.19□□□□□ -0.62
TPM3-207ENST00000341372 DHX58Q96C10 678 aa11.19□□□□□ -0.62
TPM3-207ENST00000341372 ZFP42Q96MM3 310 aa11.19□□□□□ -0.62
TPM3-207ENST00000341372 GAD1Q99259 594 aa11.19□□□□□ -0.62
TPM3-207ENST00000341372 PANK2Q9BZ23 570 aa11.19□□□□□ -0.62
TPM3-207ENST00000341372 TRIM9Q9C026 710 aa11.19□□□□□ -0.62
TPM3-207ENST00000341372 LRRC27Q9C0I9 530 aa11.19□□□□□ -0.62
TPM3-207ENST00000341372 ALG13Q9NP73 1137 aaKnown RBP11.19□□□□□ -0.62
TPM3-207ENST00000341372 PFDN2Q9UHV9 154 aa11.19□□□□□ -0.62
TPM3-207ENST00000341372 TBX20Q9UMR3 447 aa11.19□□□□□ -0.62
TPM3-207ENST00000341372 HPSEQ9Y251 543 aa11.19□□□□□ -0.62
TPM3-207ENST00000341372 PRUNE2Q8WUY3 3088 aa11.19□□□□□ -0.62
TPM3-207ENST00000341372 A0A1W2PQ27 194 aa11.19□□□□□ -0.62
TPM3-207ENST00000341372 A0A1W2PQ64 194 aa11.19□□□□□ -0.62
TPM3-207ENST00000341372 A0A1W2PQD8 194 aa11.19□□□□□ -0.62
TPM3-207ENST00000341372 FSCN2O14926 492 aa11.19□□□□□ -0.62
TPM3-207ENST00000341372 DDHD2O94830 711 aa11.19□□□□□ -0.62
TPM3-207ENST00000341372 GALTP07902 379 aa11.19□□□□□ -0.62
TPM3-207ENST00000341372 HOXB1P14653 301 aaPredicted RBP11.19□□□□□ -0.62
TPM3-207ENST00000341372 AKAP5P24588 427 aa11.19□□□□□ -0.62
TPM3-207ENST00000341372 MCM4P33991 863 aa11.19□□□□□ -0.62
TPM3-207ENST00000341372 SCNN1GP51170 649 aa11.19□□□□□ -0.62
TPM3-207ENST00000341372 MCL1Q07820 350 aa11.19□□□□□ -0.62
TPM3-207ENST00000341372 GRIK3Q13003 919 aa11.19□□□□□ -0.62
TPM3-207ENST00000341372 ZNF568Q3ZCX4 644 aa11.19□□□□□ -0.62
TPM3-207ENST00000341372 MAMSTRQ6ZN01 415 aa11.19□□□□□ -0.62
TPM3-207ENST00000341372 CLEC17AQ6ZS10 378 aa11.19□□□□□ -0.62
TPM3-207ENST00000341372 ZNF280BQ86YH2 543 aa11.19□□□□□ -0.62
TPM3-207ENST00000341372 COLGALT2Q8IYK4 626 aa11.19□□□□□ -0.62
TPM3-207ENST00000341372 THNSL1Q8IYQ7 743 aa11.19□□□□□ -0.62
TPM3-207ENST00000341372 POF1BQ8WVV4 589 aa11.19□□□□□ -0.62
TPM3-207ENST00000341372 MRPS27Q92552 414 aaKnown RBP11.19□□□□□ -0.62
TPM3-207ENST00000341372 SCYL1Q96KG9 808 aa11.19□□□□□ -0.62
TPM3-207ENST00000341372 NSUN3Q9H649 340 aaKnown RBP11.19□□□□□ -0.62
TPM3-207ENST00000341372 MIOSQ9NXC5 875 aa11.19□□□□□ -0.62
TPM3-207ENST00000341372 SPG21Q9NZD8 308 aa11.19□□□□□ -0.62
TPM3-207ENST00000341372 KCNH3Q9ULD8 1083 aa11.19□□□□□ -0.62
TPM3-207ENST00000341372 TLR6Q9Y2C9 796 aa11.19□□□□□ -0.62
TPM3-207ENST00000341372 PTGESO14684 152 aa11.18□□□□□ -0.62
TPM3-207ENST00000341372 POLR2DO15514 142 aaKnown RBP11.18□□□□□ -0.62
TPM3-207ENST00000341372 ZC3H11AO75152 810 aaKnown RBP eCLIP11.18□□□□□ -0.62
TPM3-207ENST00000341372 POMCP01189 267 aa11.18□□□□□ -0.62
TPM3-207ENST00000341372 NMT1P30419 496 aaKnown RBP11.18□□□□□ -0.62
TPM3-207ENST00000341372 PBX3P40426 434 aa11.18□□□□□ -0.62
TPM3-207ENST00000341372 SLC11A1P49279 550 aa11.18□□□□□ -0.62
TPM3-207ENST00000341372 GRM2Q14416 872 aa11.18□□□□□ -0.62
TPM3-207ENST00000341372 XKR4Q5GH76 650 aa11.18□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 50.3 ms