RNA–Protein interactions for RNA: ENST00000340829.9

CDK13-202, Transcript of cyclin dependent kinase 13, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CDK13, Length 5,066 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK13-202ENST00000340829 CYP11B1P15538 503 aa20.34■□□□□ 0.85
CDK13-202ENST00000340829 VCAM1P19320 739 aa20.34■□□□□ 0.85
CDK13-202ENST00000340829 MAPK7Q13164 816 aa20.34■□□□□ 0.85
CDK13-202ENST00000340829 EP400NLQ6ZTU2 488 aa20.34■□□□□ 0.85
CDK13-202ENST00000340829 TAS1R2Q8TE23 839 aa20.34■□□□□ 0.85
CDK13-202ENST00000340829 SCFD2Q8WU76 684 aa20.34■□□□□ 0.85
CDK13-202ENST00000340829 PPP1R12AO14974 1030 aaPredicted RBP20.34■□□□□ 0.85
CDK13-202ENST00000340829 CTSHP09668 335 aa20.34■□□□□ 0.85
CDK13-202ENST00000340829 BACE1P56817 501 aa20.34■□□□□ 0.85
CDK13-202ENST00000340829 SNAPC2Q13487 334 aa20.34■□□□□ 0.85
CDK13-202ENST00000340829 SCOCQ9UIL1 159 aa20.34■□□□□ 0.85
CDK13-202ENST00000340829 TMEM120BA0PK00 339 aa20.34■□□□□ 0.85
CDK13-202ENST00000340829 DFFAO00273 331 aa20.34■□□□□ 0.85
CDK13-202ENST00000340829 SOX10P56693 466 aa20.34■□□□□ 0.85
CDK13-202ENST00000340829 CACNB2Q08289 660 aaPredicted RBP20.34■□□□□ 0.85
CDK13-202ENST00000340829 SYTL5Q8TDW5 730 aaPredicted RBP20.34■□□□□ 0.85
CDK13-202ENST00000340829 IFT43Q96FT9 208 aa20.34■□□□□ 0.85
CDK13-202ENST00000340829 OLFML3Q9NRN5 406 aa20.34■□□□□ 0.85
CDK13-202ENST00000340829 METTL5Q9NRN9 209 aaKnown RBP20.34■□□□□ 0.85
CDK13-202ENST00000340829 ZC3H7BQ9UGR2 993 aaKnown RBP20.34■□□□□ 0.85
CDK13-202ENST00000340829 USH1CQ9Y6N9 552 aa20.34■□□□□ 0.85
CDK13-202ENST00000340829 KIF19Q2TAC6 998 aa20.34■□□□□ 0.85
CDK13-202ENST00000340829 SCG3Q8WXD2 468 aaKnown RBP20.34■□□□□ 0.85
CDK13-202ENST00000340829 ARL2BPQ9Y2Y0 163 aa20.34■□□□□ 0.85
CDK13-202ENST00000340829 RBP3P10745 1247 aa20.33■□□□□ 0.85
CDK13-202ENST00000340829 TPI1P60174 286 aa20.33■□□□□ 0.85
CDK13-202ENST00000340829 YWHAHQ04917 246 aaPredicted RBP20.33■□□□□ 0.85
CDK13-202ENST00000340829 FSCBQ5H9T9 825 aa20.33■□□□□ 0.85
CDK13-202ENST00000340829 BTBD8Q5XKL5 378 aa20.33■□□□□ 0.85
CDK13-202ENST00000340829 PARP9Q8IXQ6 854 aa20.33■□□□□ 0.85
CDK13-202ENST00000340829 MDM1Q8TC05 714 aa20.33■□□□□ 0.85
CDK13-202ENST00000340829 AGR3Q8TD06 166 aa20.33■□□□□ 0.85
CDK13-202ENST00000340829 FAM163AQ96GL9 167 aaPredicted RBP20.33■□□□□ 0.85
CDK13-202ENST00000340829 PSD3Q9NYI0 1048 aa20.33■□□□□ 0.85
CDK13-202ENST00000340829 SMG5Q9UPR3 1016 aaKnown RBP20.33■□□□□ 0.85
CDK13-202ENST00000340829 ITGB3P05106 788 aa20.33■□□□□ 0.85
CDK13-202ENST00000340829 KLF6Q99612 283 aaPredicted RBP20.33■□□□□ 0.85
CDK13-202ENST00000340829 ABCF3Q9NUQ8 709 aa20.33■□□□□ 0.85
CDK13-202ENST00000340829 FAM237AA0A1B0GTK4 181 aa20.33■□□□□ 0.85
CDK13-202ENST00000340829 TNPO2O14787 897 aaKnown RBP20.33■□□□□ 0.85
CDK13-202ENST00000340829 C1orf146Q5VVC0 180 aa20.33■□□□□ 0.85
CDK13-202ENST00000340829 KDELC2Q7Z4H8 507 aa20.33■□□□□ 0.85
CDK13-202ENST00000340829 AGO4Q9HCK5 861 aaKnown RBP20.33■□□□□ 0.85
CDK13-202ENST00000340829 ORC1Q13415 861 aa20.33■□□□□ 0.84
CDK13-202ENST00000340829 ACAD11Q709F0 780 aa20.33■□□□□ 0.84
CDK13-202ENST00000340829 PDCD2LQ9BRP1 358 aa20.33■□□□□ 0.84
CDK13-202ENST00000340829 PSMC3IPQ9P2W1 217 aaPredicted RBP20.33■□□□□ 0.84
CDK13-202ENST00000340829 IQCA1LA6NCM1 817 aa20.32■□□□□ 0.84
CDK13-202ENST00000340829 CHEK2O96017 543 aa20.32■□□□□ 0.84
CDK13-202ENST00000340829 CENPCQ03188 943 aa20.32■□□□□ 0.84
CDK13-202ENST00000340829 CXCL9Q07325 125 aa20.32■□□□□ 0.84
CDK13-202ENST00000340829 DDR1Q08345 913 aa20.32■□□□□ 0.84
CDK13-202ENST00000340829 MEI1Q5TIA1 1274 aa20.32■□□□□ 0.84
CDK13-202ENST00000340829 PCNX4Q63HM2 1172 aa20.32■□□□□ 0.84
CDK13-202ENST00000340829 DDX27Q96GQ7 796 aaKnown RBP20.32■□□□□ 0.84
CDK13-202ENST00000340829 HPDLQ96IR7 371 aa20.32■□□□□ 0.84
CDK13-202ENST00000340829 SEC16BQ96JE7 1060 aa20.32■□□□□ 0.84
CDK13-202ENST00000340829 MTMR12Q9C0I1 747 aa20.32■□□□□ 0.84
CDK13-202ENST00000340829 PLEKHA5Q9HAU0 1116 aa20.32■□□□□ 0.84
CDK13-202ENST00000340829 SATB1Q01826 763 aa20.32■□□□□ 0.84
CDK13-202ENST00000340829 NSUN2Q08J23 767 aaKnown RBP eCLIP20.32■□□□□ 0.84
CDK13-202ENST00000340829 BIRC2Q13490 618 aa20.32■□□□□ 0.84
CDK13-202ENST00000340829 OR6P1Q8NGX9 317 aa20.32■□□□□ 0.84
CDK13-202ENST00000340829 ARL8AQ96BM9 186 aa20.32■□□□□ 0.84
CDK13-202ENST00000340829 FAM161BQ96MY7 647 aa20.32■□□□□ 0.84
CDK13-202ENST00000340829 PXMP2Q9NR77 195 aa20.32■□□□□ 0.84
CDK13-202ENST00000340829 HABP4Q5JVS0 413 aaKnown RBP20.32■□□□□ 0.84
CDK13-202ENST00000340829 SLC47A2Q86VL8 602 aa20.32■□□□□ 0.84
CDK13-202ENST00000340829 PRPF31Q8WWY3 499 aaKnown RBP20.32■□□□□ 0.84
CDK13-202ENST00000340829 CLMNQ96JQ2 1002 aa20.32■□□□□ 0.84
CDK13-202ENST00000340829 FAM47DPA6NHR8 397 aa20.32■□□□□ 0.84
CDK13-202ENST00000340829 GNGT2O14610 69 aa20.32■□□□□ 0.84
CDK13-202ENST00000340829 KIF3CO14782 793 aa20.32■□□□□ 0.84
CDK13-202ENST00000340829 SLITRK3O94933 977 aa20.32■□□□□ 0.84
CDK13-202ENST00000340829 NBPF12Q5TAG4 269 aaPredicted RBP20.32■□□□□ 0.84
CDK13-202ENST00000340829 RNF135Q8IUD6 432 aa20.32■□□□□ 0.84
CDK13-202ENST00000340829 KLC4Q9NSK0 619 aa20.32■□□□□ 0.84
CDK13-202ENST00000340829 SUPT20HL2P0C7V6 817 aa20.31■□□□□ 0.84
CDK13-202ENST00000340829 C3orf62Q6ZUJ4 267 aa20.31■□□□□ 0.84
CDK13-202ENST00000340829 CYFIP2Q96F07 1278 aa20.31■□□□□ 0.84
CDK13-202ENST00000340829 FAM96AQ9H5X1 160 aa20.31■□□□□ 0.84
CDK13-202ENST00000340829 ICE2Q659A1 982 aa20.31■□□□□ 0.84
CDK13-202ENST00000340829 SP110Q9HB58 689 aa20.31■□□□□ 0.84
CDK13-202ENST00000340829 CCDC78A2IDD5 438 aa20.31■□□□□ 0.84
CDK13-202ENST00000340829 LMNAP02545 664 aaKnown RBP20.31■□□□□ 0.84
CDK13-202ENST00000340829 FNTAP49354 379 aa20.31■□□□□ 0.84
CDK13-202ENST00000340829 FBXW10Q5XX13 1052 aa20.31■□□□□ 0.84
CDK13-202ENST00000340829 TTC8Q8TAM2 541 aa20.31■□□□□ 0.84
CDK13-202ENST00000340829 PIP4K2CQ8TBX8 421 aa20.31■□□□□ 0.84
CDK13-202ENST00000340829 URGCPQ8TCY9 931 aa20.31■□□□□ 0.84
CDK13-202ENST00000340829 EPAS1Q99814 870 aa20.31■□□□□ 0.84
CDK13-202ENST00000340829 CYP4F11Q9HBI6 524 aa20.31■□□□□ 0.84
CDK13-202ENST00000340829 USP15Q9Y4E8 981 aaPredicted RBP20.31■□□□□ 0.84
CDK13-202ENST00000340829 CFAP73A6NFT4 308 aa20.31■□□□□ 0.84
CDK13-202ENST00000340829 H3BQF6 201 aa20.31■□□□□ 0.84
CDK13-202ENST00000340829 ZBTB39O15060 712 aa20.31■□□□□ 0.84
CDK13-202ENST00000340829 C6orf222P0C671 652 aaPredicted RBP20.31■□□□□ 0.84
CDK13-202ENST00000340829 TMCO4Q5TGY1 634 aa20.31■□□□□ 0.84
CDK13-202ENST00000340829 DEFB132Q7Z7B7 95 aa20.31■□□□□ 0.84
CDK13-202ENST00000340829 ATP8B4Q8TF62 1192 aa20.31■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms