RNA–Protein interactions for RNA: ENST00000340192.11

ERCC1-203, Transcript of ERCC excision repair 1, endonuclease non-catalytic subunit, humanhuman

TSL 1 (best) BASIC

Gene ERCC1, Length 949 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC1-203ENST00000340192 EDAQ92838 391 aa15.82■□□□□ 0.12
ERCC1-203ENST00000340192 ACSF2Q96CM8 615 aaPredicted RBP15.82■□□□□ 0.12
ERCC1-203ENST00000340192 GDPD2Q9HCC8 539 aa15.82■□□□□ 0.12
ERCC1-203ENST00000340192 SLC39A2Q9NP94 309 aa15.82■□□□□ 0.12
ERCC1-203ENST00000340192 USP25Q9UHP3 1055 aa15.82■□□□□ 0.12
ERCC1-203ENST00000340192 TIMM13Q9Y5L4 95 aaPredicted RBP15.82■□□□□ 0.12
ERCC1-203ENST00000340192 FAM237AA0A1B0GTK4 181 aa15.81■□□□□ 0.12
ERCC1-203ENST00000340192 SPTLC1O15269 473 aa15.81■□□□□ 0.12
ERCC1-203ENST00000340192 CCL16O15467 120 aa15.81■□□□□ 0.12
ERCC1-203ENST00000340192 N4BP1O75113 896 aaKnown RBP15.81■□□□□ 0.12
ERCC1-203ENST00000340192 ABLIM3O94929 683 aa15.81■□□□□ 0.12
ERCC1-203ENST00000340192 UBE4BO95155 1302 aa15.81■□□□□ 0.12
ERCC1-203ENST00000340192 OAZ2O95190 189 aa15.81■□□□□ 0.12
ERCC1-203ENST00000340192 HOXA9P31269 272 aa15.81■□□□□ 0.12
ERCC1-203ENST00000340192 SYKP43405 635 aa15.81■□□□□ 0.12
ERCC1-203ENST00000340192 ZXDAP98168 799 aa15.81■□□□□ 0.12
ERCC1-203ENST00000340192 YWHAHQ04917 246 aaPredicted RBP15.81■□□□□ 0.12
ERCC1-203ENST00000340192 NT5DC4Q86YG4 428 aa15.81■□□□□ 0.12
ERCC1-203ENST00000340192 NELFCDQ8IXH7 590 aa15.81■□□□□ 0.12
ERCC1-203ENST00000340192 GPD1LQ8N335 351 aa15.81■□□□□ 0.12
ERCC1-203ENST00000340192 SCFD1Q8WVM8 642 aa15.81■□□□□ 0.12
ERCC1-203ENST00000340192 SENP8Q96LD8 212 aa15.81■□□□□ 0.12
ERCC1-203ENST00000340192 LIMD1Q9UGP4 676 aa15.81■□□□□ 0.12
ERCC1-203ENST00000340192 DOCK8Q8NF50 2099 aa15.8■□□□□ 0.12
ERCC1-203ENST00000340192 A0A1W2PQ27 194 aa15.8■□□□□ 0.12
ERCC1-203ENST00000340192 A0A1W2PQ64 194 aa15.8■□□□□ 0.12
ERCC1-203ENST00000340192 A0A1W2PQD8 194 aa15.8■□□□□ 0.12
ERCC1-203ENST00000340192 PRR33A8MZF0 331 aa15.8■□□□□ 0.12
ERCC1-203ENST00000340192 KIAA0391O15091 583 aaKnown RBP15.8■□□□□ 0.12
ERCC1-203ENST00000340192 TGFB1I1O43294 461 aa15.8■□□□□ 0.12
ERCC1-203ENST00000340192 KLRC4O43908 158 aa15.8■□□□□ 0.12
ERCC1-203ENST00000340192 XYLBO75191 536 aa15.8■□□□□ 0.12
ERCC1-203ENST00000340192 ASGR2P07307 311 aa15.8■□□□□ 0.12
ERCC1-203ENST00000340192 ODC1P11926 461 aa15.8■□□□□ 0.12
ERCC1-203ENST00000340192 ATF2P15336 505 aa15.8■□□□□ 0.12
ERCC1-203ENST00000340192 PAX3P23760 479 aa15.8■□□□□ 0.12
ERCC1-203ENST00000340192 NUCB2P80303 420 aa15.8■□□□□ 0.12
ERCC1-203ENST00000340192 TFAMQ00059 246 aaKnown RBP15.8■□□□□ 0.12
ERCC1-203ENST00000340192 RTL10Q7L3V2 364 aa15.8■□□□□ 0.12
ERCC1-203ENST00000340192 GRASPQ7Z6J2 395 aaPredicted RBP15.8■□□□□ 0.12
ERCC1-203ENST00000340192 USP37Q86T82 979 aa15.8■□□□□ 0.12
ERCC1-203ENST00000340192 FSIP1Q8NA03 581 aa15.8■□□□□ 0.12
ERCC1-203ENST00000340192 GOLPH3LQ9H4A5 285 aa15.8■□□□□ 0.12
ERCC1-203ENST00000340192 PDE11AQ9HCR9 933 aa15.8■□□□□ 0.12
ERCC1-203ENST00000340192 AGPAT3Q9NRZ7 376 aa15.8■□□□□ 0.12
ERCC1-203ENST00000340192 HSPBP1Q9NZL4 362 aa15.8■□□□□ 0.12
ERCC1-203ENST00000340192 POLIQ9UNA4 740 aa15.8■□□□□ 0.12
ERCC1-203ENST00000340192 NOTCH4Q99466 2003 aa15.79■□□□□ 0.12
ERCC1-203ENST00000340192 PRRG1O14668 218 aa15.79■□□□□ 0.12
ERCC1-203ENST00000340192 CPB1P15086 417 aa15.79■□□□□ 0.12
ERCC1-203ENST00000340192 TYMPP19971 482 aa15.79■□□□□ 0.12
ERCC1-203ENST00000340192 GBP2P32456 591 aaPredicted RBP15.79■□□□□ 0.12
ERCC1-203ENST00000340192 ELF1P32519 619 aa15.79■□□□□ 0.12
ERCC1-203ENST00000340192 TAF6P49848 677 aa15.79■□□□□ 0.12
ERCC1-203ENST00000340192 BMT2Q1RMZ1 405 aa15.79■□□□□ 0.12
ERCC1-203ENST00000340192 TPGS2Q68CL5 300 aa15.79■□□□□ 0.12
ERCC1-203ENST00000340192 OVOS1Q6IE37 1185 aa15.79■□□□□ 0.12
ERCC1-203ENST00000340192 TRIM67Q6ZTA4 783 aa15.79■□□□□ 0.12
ERCC1-203ENST00000340192 CBWD2Q8IUF1 395 aa15.79■□□□□ 0.12
ERCC1-203ENST00000340192 FAM84AQ96KN4 292 aa15.79■□□□□ 0.12
ERCC1-203ENST00000340192 OXCT2Q9BYC2 517 aaPredicted RBP15.79■□□□□ 0.12
ERCC1-203ENST00000340192 EXOC1Q9NV70 894 aa15.79■□□□□ 0.12
ERCC1-203ENST00000340192 SORCS3Q9UPU3 1222 aa15.79■□□□□ 0.12
ERCC1-203ENST00000340192 TECTAO75443 2155 aa15.78■□□□□ 0.12
ERCC1-203ENST00000340192 ARHGEF37A1IGU5 675 aa15.78■□□□□ 0.12
ERCC1-203ENST00000340192 ZNF233A6NK53 670 aa15.78■□□□□ 0.12
ERCC1-203ENST00000340192 CLIC2O15247 247 aa15.78■□□□□ 0.12
ERCC1-203ENST00000340192 SEC24AO95486 1093 aa15.78■□□□□ 0.12
ERCC1-203ENST00000340192 MYL1P05976 194 aa15.78■□□□□ 0.12
ERCC1-203ENST00000340192 POU2F2P09086 479 aa15.78■□□□□ 0.12
ERCC1-203ENST00000340192 COL9A1P20849 921 aa15.78■□□□□ 0.12
ERCC1-203ENST00000340192 FSHRP23945 695 aa15.78■□□□□ 0.12
ERCC1-203ENST00000340192 NTHL1P78549 312 aa15.78■□□□□ 0.12
ERCC1-203ENST00000340192 STK4Q13043 487 aa15.78■□□□□ 0.12
ERCC1-203ENST00000340192 MTMR3Q13615 1198 aa15.78■□□□□ 0.12
ERCC1-203ENST00000340192 KNOP1Q1ED39 458 aaKnown RBP15.78■□□□□ 0.12
ERCC1-203ENST00000340192 KMT5BQ4FZB7 885 aa15.78■□□□□ 0.12
ERCC1-203ENST00000340192 RNF19BQ6ZMZ0 732 aa15.78■□□□□ 0.12
ERCC1-203ENST00000340192 GET4Q7L5D6 327 aaPredicted RBP15.78■□□□□ 0.12
ERCC1-203ENST00000340192 TCEAL8Q8IYN2 117 aa15.78■□□□□ 0.12
ERCC1-203ENST00000340192 C1orf127Q8N9H9 656 aa15.78■□□□□ 0.12
ERCC1-203ENST00000340192 CACTINQ8WUQ7 758 aaKnown RBP15.78■□□□□ 0.12
ERCC1-203ENST00000340192 MYADMQ96S97 322 aa15.78■□□□□ 0.12
ERCC1-203ENST00000340192 CYP4F11Q9HBI6 524 aa15.78■□□□□ 0.12
ERCC1-203ENST00000340192 KIAA1586Q9HCI6 787 aa15.78■□□□□ 0.12
ERCC1-203ENST00000340192 HCFC1R1Q9NWW0 138 aa15.78■□□□□ 0.12
ERCC1-203ENST00000340192 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP15.78■□□□□ 0.12
ERCC1-203ENST00000340192 WDFY4Q6ZS81 3184 aa15.77■□□□□ 0.12
ERCC1-203ENST00000340192 TMEM221A6NGB7 291 aa15.77■□□□□ 0.12
ERCC1-203ENST00000340192 OR6C75A6NL08 312 aa15.77■□□□□ 0.12
ERCC1-203ENST00000340192 KPNA7A9QM74 516 aa15.77■□□□□ 0.12
ERCC1-203ENST00000340192 M0R296 226 aa15.77■□□□□ 0.12
ERCC1-203ENST00000340192 CYB561D2O14569 222 aa15.77■□□□□ 0.12
ERCC1-203ENST00000340192 RPN1P04843 607 aaKnown RBP15.77■□□□□ 0.12
ERCC1-203ENST00000340192 ITGB3P05106 788 aa15.77■□□□□ 0.12
ERCC1-203ENST00000340192 CYP11A1P05108 521 aa15.77■□□□□ 0.12
ERCC1-203ENST00000340192 OR4Q2P0C623 313 aa15.77■□□□□ 0.12
ERCC1-203ENST00000340192 PRR29P0C7W0 189 aa15.77■□□□□ 0.12
ERCC1-203ENST00000340192 POLR2BP30876 1174 aaKnown RBP15.77■□□□□ 0.12
ERCC1-203ENST00000340192 CYP2J2P51589 502 aa15.77■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms