RNA–Protein interactions for RNA: ENST00000340157.8

VRK2-201, Transcript of vaccinia related kinase 2, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene VRK2, Length 1,888 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK2-201ENST00000340157 OSGEPQ9NPF4 335 aa22.68■■□□□ 1.22
VRK2-201ENST00000340157 KLK14Q9P0G3 267 aa22.68■■□□□ 1.22
VRK2-201ENST00000340157 RPLP2P05387 115 aaKnown RBP22.67■■□□□ 1.22
VRK2-201ENST00000340157 ATICP31939 592 aa22.67■■□□□ 1.22
VRK2-201ENST00000340157 PTPN11Q06124 597 aaPredicted RBP22.67■■□□□ 1.22
VRK2-201ENST00000340157 NAA30Q147X3 362 aaPredicted RBP22.67■■□□□ 1.22
VRK2-201ENST00000340157 CLEC16AQ2KHT3 1053 aa22.67■■□□□ 1.22
VRK2-201ENST00000340157 TWF2Q6IBS0 349 aaKnown RBP22.67■■□□□ 1.22
VRK2-201ENST00000340157 ZNF677Q86XU0 584 aa22.67■■□□□ 1.22
VRK2-201ENST00000340157 LRRC57Q8N9N7 239 aa22.67■■□□□ 1.22
VRK2-201ENST00000340157 TPCN2Q8NHX9 752 aa22.67■■□□□ 1.22
VRK2-201ENST00000340157 GLT1D1Q96MS3 346 aa22.67■■□□□ 1.22
VRK2-201ENST00000340157 XRN2Q9H0D6 950 aaKnown RBP eCLIP22.67■■□□□ 1.22
VRK2-201ENST00000340157 SMYD3Q9H7B4 428 aa22.67■■□□□ 1.22
VRK2-201ENST00000340157 PPEF2O14830 753 aa22.66■■□□□ 1.22
VRK2-201ENST00000340157 NCK2O43639 380 aa22.66■■□□□ 1.22
VRK2-201ENST00000340157 SRGAP2O75044 1071 aa22.66■■□□□ 1.22
VRK2-201ENST00000340157 UNGP13051 313 aaPredicted RBP22.66■■□□□ 1.22
VRK2-201ENST00000340157 GNA15P30679 374 aa22.66■■□□□ 1.22
VRK2-201ENST00000340157 CDH8P55286 799 aa22.66■■□□□ 1.22
VRK2-201ENST00000340157 NFX1Q12986 1120 aaKnown RBP22.66■■□□□ 1.22
VRK2-201ENST00000340157 SLC43A3Q8NBI5 491 aa22.66■■□□□ 1.22
VRK2-201ENST00000340157 CTNNBL1Q8WYA6 563 aaPredicted RBP22.66■■□□□ 1.22
VRK2-201ENST00000340157 RFFLQ8WZ73 363 aa22.66■■□□□ 1.22
VRK2-201ENST00000340157 HPDLQ96IR7 371 aa22.66■■□□□ 1.22
VRK2-201ENST00000340157 ZSWIM1Q9BR11 485 aa22.66■■□□□ 1.22
VRK2-201ENST00000340157 TLR10Q9BXR5 811 aa22.66■■□□□ 1.22
VRK2-201ENST00000340157 GOLPH3Q9H4A6 298 aa22.66■■□□□ 1.22
VRK2-201ENST00000340157 RBP5P82980 135 aa22.66■■□□□ 1.22
VRK2-201ENST00000340157 FBXO47Q5MNV8 452 aa22.66■■□□□ 1.22
VRK2-201ENST00000340157 SLC35G2Q8TBE7 412 aa22.66■■□□□ 1.22
VRK2-201ENST00000340157 FAXDC2Q96IV6 333 aa22.66■■□□□ 1.22
VRK2-201ENST00000340157 UNC93B1Q9H1C4 597 aa22.66■■□□□ 1.22
VRK2-201ENST00000340157 ERVK-5Q9HDB9 667 aa22.66■■□□□ 1.22
VRK2-201ENST00000340157 COG5Q9UP83 839 aa22.66■■□□□ 1.22
VRK2-201ENST00000340157 SMIM28A0A1B0GU29 152 aa22.65■■□□□ 1.22
VRK2-201ENST00000340157 MEIS3P2A8K0S8 358 aa22.65■■□□□ 1.22
VRK2-201ENST00000340157 STAU1O95793 577 aaKnown RBP22.65■■□□□ 1.22
VRK2-201ENST00000340157 FTCDO95954 541 aa22.65■■□□□ 1.22
VRK2-201ENST00000340157 CYP1A1P04798 512 aaPredicted RBP22.65■■□□□ 1.22
VRK2-201ENST00000340157 SSTR3P32745 418 aaPredicted RBP22.65■■□□□ 1.22
VRK2-201ENST00000340157 NOP2P46087 812 aaKnown RBP22.65■■□□□ 1.22
VRK2-201ENST00000340157 ZNF394Q53GI3 561 aa22.65■■□□□ 1.22
VRK2-201ENST00000340157 TRPV6Q9H1D0 765 aa22.65■■□□□ 1.22
VRK2-201ENST00000340157 PARP2Q9UGN5 583 aa22.65■■□□□ 1.22
VRK2-201ENST00000340157 SNX12Q9UMY4 172 aa22.65■■□□□ 1.22
VRK2-201ENST00000340157 SAR1BQ9Y6B6 198 aa22.65■■□□□ 1.22
VRK2-201ENST00000340157 KCNE1P15382 129 aa22.64■■□□□ 1.22
VRK2-201ENST00000340157 TUBB2AQ13885 445 aa22.64■■□□□ 1.22
VRK2-201ENST00000340157 FAM26DQ5JW98 314 aa22.64■■□□□ 1.22
VRK2-201ENST00000340157 ACAD10Q6JQN1 1059 aa22.64■■□□□ 1.22
VRK2-201ENST00000340157 TUBB2BQ9BVA1 445 aa22.64■■□□□ 1.22
VRK2-201ENST00000340157 NOL12Q9UGY1 213 aaKnown RBP eCLIP22.64■■□□□ 1.22
VRK2-201ENST00000340157 V9GYY5 206 aaPredicted RBP22.64■■□□□ 1.22
VRK2-201ENST00000340157 ATMINO43313 823 aaPredicted RBP22.64■■□□□ 1.21
VRK2-201ENST00000340157 GHRP10912 638 aa22.64■■□□□ 1.21
VRK2-201ENST00000340157 CD52P31358 61 aa22.64■■□□□ 1.21
VRK2-201ENST00000340157 LPIN1Q14693 890 aa22.64■■□□□ 1.21
VRK2-201ENST00000340157 ZNF618Q5T7W0 954 aa22.64■■□□□ 1.21
VRK2-201ENST00000340157 WHAMMQ8TF30 809 aa22.64■■□□□ 1.21
VRK2-201ENST00000340157 ZNF606Q8WXB4 792 aa22.64■■□□□ 1.21
VRK2-201ENST00000340157 CYFIP2Q96F07 1278 aa22.64■■□□□ 1.21
VRK2-201ENST00000340157 FAM105AQ9NUU6 356 aa22.64■■□□□ 1.21
VRK2-201ENST00000340157 HMGXB4Q9UGU5 601 aa22.64■■□□□ 1.21
VRK2-201ENST00000340157 CHORDC1Q9UHD1 332 aaPredicted RBP22.64■■□□□ 1.21
VRK2-201ENST00000340157 PHF24Q9UPV7 400 aa22.64■■□□□ 1.21
VRK2-201ENST00000340157 NOD1Q9Y239 953 aa22.64■■□□□ 1.21
VRK2-201ENST00000340157 PTPN22Q9Y2R2 807 aa22.64■■□□□ 1.21
VRK2-201ENST00000340157 ZNF185O15231 689 aa22.63■■□□□ 1.21
VRK2-201ENST00000340157 THAP12O43422 761 aa22.63■■□□□ 1.21
VRK2-201ENST00000340157 TADA3O75528 432 aa22.63■■□□□ 1.21
VRK2-201ENST00000340157 SOX4Q06945 474 aaPredicted RBP22.63■■□□□ 1.21
VRK2-201ENST00000340157 TCEAL1Q15170 157 aa22.63■■□□□ 1.21
VRK2-201ENST00000340157 MEI1Q5TIA1 1274 aa22.63■■□□□ 1.21
VRK2-201ENST00000340157 TRAF7Q6Q0C0 670 aa22.63■■□□□ 1.21
VRK2-201ENST00000340157 SLFN11Q7Z7L1 901 aa22.63■■□□□ 1.21
VRK2-201ENST00000340157 TFAP2BQ92481 460 aa22.63■■□□□ 1.21
VRK2-201ENST00000340157 TWNKQ96RR1 684 aa22.63■■□□□ 1.21
VRK2-201ENST00000340157 CHST12Q9NRB3 414 aa22.63■■□□□ 1.21
VRK2-201ENST00000340157 PADI3Q9ULW8 664 aa22.63■■□□□ 1.21
VRK2-201ENST00000340157 MGEA5O60502 916 aa22.62■■□□□ 1.21
VRK2-201ENST00000340157 BRD2P25440 801 aaKnown RBP22.62■■□□□ 1.21
VRK2-201ENST00000340157 GPC5P78333 572 aa22.62■■□□□ 1.21
VRK2-201ENST00000340157 PASD1Q8IV76 773 aa22.62■■□□□ 1.21
VRK2-201ENST00000340157 BEST2Q8NFU1 509 aa22.62■■□□□ 1.21
VRK2-201ENST00000340157 CPA5Q8WXQ8 436 aa22.62■■□□□ 1.21
VRK2-201ENST00000340157 STARD7Q9NQZ5 370 aa22.62■■□□□ 1.21
VRK2-201ENST00000340157 UBQLN1Q9UMX0 589 aaKnown RBP22.62■■□□□ 1.21
VRK2-201ENST00000340157 PACSIN2Q9UNF0 486 aaPredicted RBP22.62■■□□□ 1.21
VRK2-201ENST00000340157 PTGESO14684 152 aa22.62■■□□□ 1.21
VRK2-201ENST00000340157 GPR182O15218 404 aa22.62■■□□□ 1.21
VRK2-201ENST00000340157 RAD23BP54727 409 aa22.62■■□□□ 1.21
VRK2-201ENST00000340157 NOMO3P69849 1222 aa22.62■■□□□ 1.21
VRK2-201ENST00000340157 CENPCQ03188 943 aa22.62■■□□□ 1.21
VRK2-201ENST00000340157 MTFR1Q15390 333 aa22.62■■□□□ 1.21
VRK2-201ENST00000340157 IFI16Q16666 785 aaKnown RBP22.62■■□□□ 1.21
VRK2-201ENST00000340157 WHAMMP3Q1A5X7 153 aa22.62■■□□□ 1.21
VRK2-201ENST00000340157 NAA35Q5VZE5 725 aa22.62■■□□□ 1.21
VRK2-201ENST00000340157 C9orf57Q5W0N0 161 aa22.62■■□□□ 1.21
VRK2-201ENST00000340157 SMYD5Q6GMV2 418 aa22.62■■□□□ 1.21
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms