RNA–Protein interactions for RNA: ENST00000339717.11

BRPF3-201, Transcript of bromodomain and PHD finger containing 3, humanhuman

TSL 5 BASIC

Gene BRPF3, Length 4,820 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRPF3-201ENST00000339717 PLEKHA8Q96JA3 519 aa13.23□□□□□ -0.29
BRPF3-201ENST00000339717 UNKQ9C0B0 810 aaKnown RBP13.23□□□□□ -0.29
BRPF3-201ENST00000339717 TRMT6Q9UJA5 497 aaKnown RBP13.23□□□□□ -0.29
BRPF3-201ENST00000339717 COL4A3BPQ9Y5P4 624 aa13.23□□□□□ -0.29
BRPF3-201ENST00000339717 ILVBLA1L0T0 632 aa13.23□□□□□ -0.29
BRPF3-201ENST00000339717 CBX6O95503 412 aa13.23□□□□□ -0.29
BRPF3-201ENST00000339717 STARD3NLO95772 234 aa13.23□□□□□ -0.29
BRPF3-201ENST00000339717 IL15P40933 162 aaPredicted RBP13.23□□□□□ -0.29
BRPF3-201ENST00000339717 PTPN12Q05209 780 aaKnown RBP13.23□□□□□ -0.29
BRPF3-201ENST00000339717 SPERTQ8NA61 448 aa13.23□□□□□ -0.29
BRPF3-201ENST00000339717 SMARCAL1Q9NZC9 954 aa13.23□□□□□ -0.29
BRPF3-201ENST00000339717 PCSK1NQ9UHG2 260 aa13.23□□□□□ -0.29
BRPF3-201ENST00000339717 TCOF1Q13428 1488 aaKnown RBP13.23□□□□□ -0.29
BRPF3-201ENST00000339717 SHANK2Q9UPX8 1470 aa13.23□□□□□ -0.29
BRPF3-201ENST00000339717 CLASP1Q7Z460 1538 aa13.23□□□□□ -0.29
BRPF3-201ENST00000339717 GSTA4O15217 222 aa13.23□□□□□ -0.29
BRPF3-201ENST00000339717 SULT1B1O43704 296 aa13.23□□□□□ -0.29
BRPF3-201ENST00000339717 NAMPTP43490 491 aa13.23□□□□□ -0.29
BRPF3-201ENST00000339717 SLC12A2P55011 1212 aa13.23□□□□□ -0.29
BRPF3-201ENST00000339717 RPL26P61254 145 aaKnown RBP13.23□□□□□ -0.29
BRPF3-201ENST00000339717 TNFAIP2Q03169 654 aa13.23□□□□□ -0.29
BRPF3-201ENST00000339717 LRRC8EQ6NSJ5 796 aa13.23□□□□□ -0.29
BRPF3-201ENST00000339717 TTC23LQ6PF05 361 aa13.23□□□□□ -0.29
BRPF3-201ENST00000339717 NLRP10Q86W26 655 aa13.23□□□□□ -0.29
BRPF3-201ENST00000339717 CKAP2Q8WWK9 683 aa13.23□□□□□ -0.29
BRPF3-201ENST00000339717 BBS2Q9BXC9 721 aa13.23□□□□□ -0.29
BRPF3-201ENST00000339717 COG4Q9H9E3 785 aa13.23□□□□□ -0.29
BRPF3-201ENST00000339717 SNRKQ9NRH2 765 aa13.23□□□□□ -0.29
BRPF3-201ENST00000339717 PCDH11XQ9BZA7 1347 aa13.23□□□□□ -0.29
BRPF3-201ENST00000339717 A0A0J9YVX5 310 aa13.23□□□□□ -0.29
BRPF3-201ENST00000339717 BOLA2-SMG1P6H3BVE0 249 aa13.23□□□□□ -0.29
BRPF3-201ENST00000339717 SGK1O00141 431 aa13.23□□□□□ -0.29
BRPF3-201ENST00000339717 OXSR1O95747 527 aaPredicted RBP13.23□□□□□ -0.29
BRPF3-201ENST00000339717 PLCG2P16885 1265 aa13.23□□□□□ -0.29
BRPF3-201ENST00000339717 CDC25AP30304 524 aa13.23□□□□□ -0.29
BRPF3-201ENST00000339717 COPZ1P61923 177 aa13.23□□□□□ -0.29
BRPF3-201ENST00000339717 METTL16Q86W50 562 aaKnown RBP13.23□□□□□ -0.29
BRPF3-201ENST00000339717 UCMAQ8WVF2 138 aa13.23□□□□□ -0.29
BRPF3-201ENST00000339717 HSPBAP1Q96EW2 488 aa13.23□□□□□ -0.29
BRPF3-201ENST00000339717 SCYL1Q96KG9 808 aa13.23□□□□□ -0.29
BRPF3-201ENST00000339717 FARSBQ9NSD9 589 aaKnown RBP13.23□□□□□ -0.29
BRPF3-201ENST00000339717 PNPLA3Q9NST1 481 aa13.23□□□□□ -0.29
BRPF3-201ENST00000339717 GINM1Q9NU53 330 aa13.23□□□□□ -0.29
BRPF3-201ENST00000339717 NSMCE4AQ9NXX6 385 aa13.23□□□□□ -0.29
BRPF3-201ENST00000339717 STK24Q9Y6E0 443 aa13.23□□□□□ -0.29
BRPF3-201ENST00000339717 STMND1H3BQB6 276 aa13.22□□□□□ -0.29
BRPF3-201ENST00000339717 H7C0C1 242 aa13.22□□□□□ -0.29
BRPF3-201ENST00000339717 DDX3XO00571 662 aaKnown RBP eCLIP13.22□□□□□ -0.295e-7■□□□□ 11.3
BRPF3-201ENST00000339717 USP1O94782 785 aa13.22□□□□□ -0.29
BRPF3-201ENST00000339717 PPP2R2DQ66LE6 453 aa13.22□□□□□ -0.29
BRPF3-201ENST00000339717 KRT26Q7Z3Y9 468 aa13.22□□□□□ -0.29
BRPF3-201ENST00000339717 MYD88Q99836 296 aa13.22□□□□□ -0.29
BRPF3-201ENST00000339717 PNMA3Q9UL41 463 aa13.22□□□□□ -0.29
BRPF3-201ENST00000339717 PAEPP09466 180 aa13.22□□□□□ -0.29
BRPF3-201ENST00000339717 SLC1A4P43007 532 aa13.22□□□□□ -0.29
BRPF3-201ENST00000339717 CDK17Q00537 523 aa13.22□□□□□ -0.29
BRPF3-201ENST00000339717 DCUN1D2Q6PH85 259 aa13.22□□□□□ -0.29
BRPF3-201ENST00000339717 TMC3Q7Z5M5 1100 aa13.22□□□□□ -0.29
BRPF3-201ENST00000339717 SATL1Q86VE3 508 aa13.22□□□□□ -0.29
BRPF3-201ENST00000339717 EPS8L3Q8TE67 593 aaKnown RBP13.22□□□□□ -0.29
BRPF3-201ENST00000339717 OTULINQ96BN8 352 aa13.22□□□□□ -0.29
BRPF3-201ENST00000339717 DNAJC7Q99615 494 aa13.22□□□□□ -0.29
BRPF3-201ENST00000339717 A8MUI8 341 aa13.22□□□□□ -0.29
BRPF3-201ENST00000339717 SRGNP10124 158 aa13.22□□□□□ -0.29
BRPF3-201ENST00000339717 ALDH1A3P47895 512 aa13.22□□□□□ -0.29
BRPF3-201ENST00000339717 KPNA2P52292 529 aaKnown RBP13.22□□□□□ -0.29
BRPF3-201ENST00000339717 FMR1Q06787 632 aaKnown RBP eCLIP13.22□□□□□ -0.293e-6■■□□□ 11.7
BRPF3-201ENST00000339717 TOB2Q14106 344 aaPredicted RBP13.22□□□□□ -0.29
BRPF3-201ENST00000339717 TAB1Q15750 504 aa13.22□□□□□ -0.29
BRPF3-201ENST00000339717 AASDHQ4L235 1098 aaPredicted RBP13.22□□□□□ -0.29
BRPF3-201ENST00000339717 METTL21CQ5VZV1 264 aa13.22□□□□□ -0.29
BRPF3-201ENST00000339717 ZNF444Q8N0Y2 327 aaPredicted RBP13.22□□□□□ -0.29
BRPF3-201ENST00000339717 TTC30BQ8N4P2 665 aa13.22□□□□□ -0.29
BRPF3-201ENST00000339717 CGREF1Q99674 301 aa13.22□□□□□ -0.29
BRPF3-201ENST00000339717 PDCD10Q9BUL8 212 aa13.22□□□□□ -0.29
BRPF3-201ENST00000339717 SP140LQ9H930 580 aa13.22□□□□□ -0.29
BRPF3-201ENST00000339717 PSMD11O00231 422 aa13.22□□□□□ -0.29
BRPF3-201ENST00000339717 ATF7P17544 494 aaPredicted RBP13.22□□□□□ -0.29
BRPF3-201ENST00000339717 RAP1GAPP47736 663 aa13.22□□□□□ -0.29
BRPF3-201ENST00000339717 USP11P51784 963 aa13.22□□□□□ -0.29
BRPF3-201ENST00000339717 NAB2Q15742 525 aa13.22□□□□□ -0.29
BRPF3-201ENST00000339717 PLEKHM3Q6ZWE6 761 aa13.22□□□□□ -0.29
BRPF3-201ENST00000339717 DYMQ7RTS9 669 aa13.22□□□□□ -0.29
BRPF3-201ENST00000339717 GCOM2Q9BZD3 368 aaPredicted RBP13.22□□□□□ -0.29
BRPF3-201ENST00000339717 CCDC177Q9NQR7 707 aaPredicted RBP13.22□□□□□ -0.29
BRPF3-201ENST00000339717 AURKCQ9UQB9 309 aa13.22□□□□□ -0.29
BRPF3-201ENST00000339717 ERVK-11Q9UQG0 969 aa13.22□□□□□ -0.29
BRPF3-201ENST00000339717 SH3PXD2BA1X283 911 aa13.21□□□□□ -0.29
BRPF3-201ENST00000339717 THOP1P52888 689 aa13.21□□□□□ -0.29
BRPF3-201ENST00000339717 KRT24Q2M2I5 525 aa13.21□□□□□ -0.29
BRPF3-201ENST00000339717 ANKDD1AQ495B1 522 aa13.21□□□□□ -0.29
BRPF3-201ENST00000339717 C4orf50Q6ZRC1 276 aa13.21□□□□□ -0.29
BRPF3-201ENST00000339717 DNAJC1Q96KC8 554 aaKnown RBP13.21□□□□□ -0.29
BRPF3-201ENST00000339717 CEP295NLQ96MC4 621 aa13.21□□□□□ -0.29
BRPF3-201ENST00000339717 MKNK1Q9BUB5 465 aa13.21□□□□□ -0.29
BRPF3-201ENST00000339717 ZNF277Q9NRM2 450 aaPredicted RBP13.21□□□□□ -0.29
BRPF3-201ENST00000339717 FAM153BP0C7A2 387 aa13.21□□□□□ -0.29
BRPF3-201ENST00000339717 GNL1P36915 607 aaPredicted RBP13.21□□□□□ -0.29
BRPF3-201ENST00000339717 RAB25P57735 213 aa13.21□□□□□ -0.29
BRPF3-201ENST00000339717 CYP4A11Q02928 519 aa13.21□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms