RNA–Protein interactions for RNA: ENST00000339488.8

PTCHD4-201, Transcript of patched domain containing 4, humanhuman

APPRIS P1 TSL 2 BASIC

Gene PTCHD4, Length 2,850 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCHD4-201ENST00000339488 APPBP2Q92624 585 aa10.18□□□□□ -0.78
PTCHD4-201ENST00000339488 OSBPL6Q9BZF3 934 aa10.18□□□□□ -0.78
PTCHD4-201ENST00000339488 NRDE2Q9H7Z3 1164 aa10.18□□□□□ -0.78
PTCHD4-201ENST00000339488 CNGB3Q9NQW8 809 aa10.18□□□□□ -0.78
PTCHD4-201ENST00000339488 UVRAGQ9P2Y5 699 aa10.18□□□□□ -0.78
PTCHD4-201ENST00000339488 ZSCAN5BA6NJL1 495 aa10.17□□□□□ -0.78
PTCHD4-201ENST00000339488 ARL1P40616 181 aaPredicted RBP10.17□□□□□ -0.78
PTCHD4-201ENST00000339488 KCNQ4P56696 695 aa10.17□□□□□ -0.78
PTCHD4-201ENST00000339488 SLC1A5Q15758 541 aa10.17□□□□□ -0.78
PTCHD4-201ENST00000339488 NAALADL2Q58DX5 795 aa10.17□□□□□ -0.78
PTCHD4-201ENST00000339488 CCDC81Q6ZN84 652 aa10.17□□□□□ -0.78
PTCHD4-201ENST00000339488 TRIM22Q8IYM9 498 aa10.17□□□□□ -0.78
PTCHD4-201ENST00000339488 NATD1Q8N6N6 113 aa10.17□□□□□ -0.78
PTCHD4-201ENST00000339488 CCDC110Q8TBZ0 833 aa10.17□□□□□ -0.78
PTCHD4-201ENST00000339488 SUN5Q8TC36 379 aa10.17□□□□□ -0.78
PTCHD4-201ENST00000339488 FAR2Q96K12 515 aa10.17□□□□□ -0.78
PTCHD4-201ENST00000339488 C2orf49Q9BVC5 232 aaPredicted RBP10.17□□□□□ -0.78
PTCHD4-201ENST00000339488 SEMA6BQ9H3T3 888 aa10.17□□□□□ -0.78
PTCHD4-201ENST00000339488 ZNF287Q9HBT7 754 aa10.17□□□□□ -0.78
PTCHD4-201ENST00000339488 ARHGEF4Q9NR80 690 aa10.17□□□□□ -0.78
PTCHD4-201ENST00000339488 MTRF1LQ9UGC7 380 aaKnown RBP10.17□□□□□ -0.78
PTCHD4-201ENST00000339488 NAALADL1Q9UQQ1 740 aa10.17□□□□□ -0.78
PTCHD4-201ENST00000339488 BAZ2BQ9UIF8 2168 aaKnown RBP10.17□□□□□ -0.78
PTCHD4-201ENST00000339488 SSU72P8A0A1W2PR75 194 aa10.17□□□□□ -0.78
PTCHD4-201ENST00000339488 RBAK-RBAKDNI3L0D1 243 aa10.17□□□□□ -0.78
PTCHD4-201ENST00000339488 MCF2LO15068 1137 aa10.17□□□□□ -0.78
PTCHD4-201ENST00000339488 PIAS1O75925 651 aa10.17□□□□□ -0.78
PTCHD4-201ENST00000339488 ZBTB7AO95365 584 aa10.17□□□□□ -0.78
PTCHD4-201ENST00000339488 SERPING1P05155 500 aa10.17□□□□□ -0.78
PTCHD4-201ENST00000339488 CHRNB2P17787 502 aa10.17□□□□□ -0.78
PTCHD4-201ENST00000339488 PEX3P56589 373 aa10.17□□□□□ -0.78
PTCHD4-201ENST00000339488 MAPK7Q13164 816 aa10.17□□□□□ -0.78
PTCHD4-201ENST00000339488 HNRNPDQ14103 355 aaKnown RBP10.17□□□□□ -0.78
PTCHD4-201ENST00000339488 HSP90AA5PQ58FG0 334 aa10.17□□□□□ -0.78
PTCHD4-201ENST00000339488 HP1BP3Q5SSJ5 553 aaPredicted RBP10.17□□□□□ -0.78
PTCHD4-201ENST00000339488 ALYREFQ86V81 257 aaKnown RBP10.17□□□□□ -0.78
PTCHD4-201ENST00000339488 RBM15BQ8NDT2 890 aaKnown RBP10.17□□□□□ -0.78
PTCHD4-201ENST00000339488 NUDT16Q96DE0 195 aaKnown RBP10.17□□□□□ -0.78
PTCHD4-201ENST00000339488 CCDC85AQ96PX6 553 aaPredicted RBP10.17□□□□□ -0.78
PTCHD4-201ENST00000339488 EYA1Q99502 592 aa10.17□□□□□ -0.78
PTCHD4-201ENST00000339488 HERC2P3Q9BVR0 1158 aa10.17□□□□□ -0.78
PTCHD4-201ENST00000339488 CLK4Q9HAZ1 481 aaKnown RBP10.17□□□□□ -0.78
PTCHD4-201ENST00000339488 PARVBQ9HBI1 364 aa10.17□□□□□ -0.78
PTCHD4-201ENST00000339488 CYLDQ9NQC7 956 aa10.17□□□□□ -0.78
PTCHD4-201ENST00000339488 GID8Q9NWU2 228 aa10.17□□□□□ -0.78
PTCHD4-201ENST00000339488 EBF1Q9UH73 591 aa10.17□□□□□ -0.78
PTCHD4-201ENST00000339488 RSL24D1Q9UHA3 163 aaKnown RBP10.17□□□□□ -0.78
PTCHD4-201ENST00000339488 CNOT7Q9UIV1 285 aaKnown RBP10.17□□□□□ -0.78
PTCHD4-201ENST00000339488 ATP6V0A2Q9Y487 856 aa10.17□□□□□ -0.78
PTCHD4-201ENST00000339488 TCRBV7S2A1N4TA0A589 114 aa10.16□□□□□ -0.78
PTCHD4-201ENST00000339488 ARHGAP10A1A4S6 786 aa10.16□□□□□ -0.78
PTCHD4-201ENST00000339488 TMEM114B3SHH9 223 aa10.16□□□□□ -0.78
PTCHD4-201ENST00000339488 CDK2AP1O14519 115 aa10.16□□□□□ -0.78
PTCHD4-201ENST00000339488 GPAA1O43292 621 aa10.16□□□□□ -0.78
PTCHD4-201ENST00000339488 NOL4O94818 638 aa10.16□□□□□ -0.78
PTCHD4-201ENST00000339488 THRAP10827 490 aa10.16□□□□□ -0.78
PTCHD4-201ENST00000339488 CCNE1P24864 410 aa10.16□□□□□ -0.78
PTCHD4-201ENST00000339488 HOXD10P28358 340 aa10.16□□□□□ -0.78
PTCHD4-201ENST00000339488 ADSLP30566 484 aaPredicted RBP10.16□□□□□ -0.78
PTCHD4-201ENST00000339488 RPA3P35244 121 aaPredicted RBP10.16□□□□□ -0.78
PTCHD4-201ENST00000339488 SCNN1DP51172 638 aa10.16□□□□□ -0.78
PTCHD4-201ENST00000339488 ADRM1Q16186 407 aa10.16□□□□□ -0.78
PTCHD4-201ENST00000339488 MAPK6Q16659 721 aa10.16□□□□□ -0.78
PTCHD4-201ENST00000339488 CCDC58Q4VC31 144 aa10.16□□□□□ -0.78
PTCHD4-201ENST00000339488 SLC45A4Q5BKX6 768 aa10.16□□□□□ -0.78
PTCHD4-201ENST00000339488 UNC13DQ70J99 1090 aa10.16□□□□□ -0.78
PTCHD4-201ENST00000339488 MIER3Q7Z3K6 550 aa10.16□□□□□ -0.78
PTCHD4-201ENST00000339488 ULK2Q8IYT8 1036 aa10.16□□□□□ -0.78
PTCHD4-201ENST00000339488 CLIP4Q8N3C7 705 aa10.16□□□□□ -0.78
PTCHD4-201ENST00000339488 GIMAP8Q8ND71 665 aaPredicted RBP10.16□□□□□ -0.78
PTCHD4-201ENST00000339488 C7orf57Q8NEG2 295 aa10.16□□□□□ -0.78
PTCHD4-201ENST00000339488 EXD1Q8NHP7 514 aa10.16□□□□□ -0.78
PTCHD4-201ENST00000339488 IGDCC4Q8TDY8 1250 aa10.16□□□□□ -0.78
PTCHD4-201ENST00000339488 MTBPQ96DY7 904 aa10.16□□□□□ -0.78
PTCHD4-201ENST00000339488 PLEKHA8Q96JA3 519 aa10.16□□□□□ -0.78
PTCHD4-201ENST00000339488 RBM15Q96T37 977 aaKnown RBP eCLIP10.16□□□□□ -0.787e-7■■■■■ 26.8
PTCHD4-201ENST00000339488 ZBED2Q9BTP6 218 aa10.16□□□□□ -0.78
PTCHD4-201ENST00000339488 MTPAPQ9NVV4 582 aaKnown RBP eCLIP10.16□□□□□ -0.78
PTCHD4-201ENST00000339488 PI4KBQ9UBF8 816 aa10.16□□□□□ -0.78
PTCHD4-201ENST00000339488 PCDHA4Q9UN74 947 aa10.16□□□□□ -0.78
PTCHD4-201ENST00000339488 TOPAZ1Q8N9V7 1692 aa10.16□□□□□ -0.78
PTCHD4-201ENST00000339488 FAM47DPA6NHR8 397 aa10.16□□□□□ -0.78
PTCHD4-201ENST00000339488 TTC34A8MYJ7 566 aa10.16□□□□□ -0.78
PTCHD4-201ENST00000339488 IRS4O14654 1257 aaPredicted RBP10.16□□□□□ -0.78
PTCHD4-201ENST00000339488 ITM2AO43736 263 aa10.16□□□□□ -0.78
PTCHD4-201ENST00000339488 ICMTO60725 284 aa10.16□□□□□ -0.78
PTCHD4-201ENST00000339488 CIB2O75838 187 aa10.16□□□□□ -0.78
PTCHD4-201ENST00000339488 IGKV5-2P06315 115 aa10.16□□□□□ -0.78
PTCHD4-201ENST00000339488 ACTN1P12814 892 aa10.16□□□□□ -0.78
PTCHD4-201ENST00000339488 RPL10P27635 214 aaKnown RBP10.16□□□□□ -0.78
PTCHD4-201ENST00000339488 UBA7P41226 1012 aa10.16□□□□□ -0.78
PTCHD4-201ENST00000339488 MARCKSL1P49006 195 aa10.16□□□□□ -0.78
PTCHD4-201ENST00000339488 GPC3P51654 580 aa10.16□□□□□ -0.78
PTCHD4-201ENST00000339488 MAPK10P53779 464 aa10.16□□□□□ -0.78
PTCHD4-201ENST00000339488 MRPS9P82933 396 aaKnown RBP10.16□□□□□ -0.78
PTCHD4-201ENST00000339488 PDAP1Q13442 181 aaKnown RBP10.16□□□□□ -0.78
PTCHD4-201ENST00000339488 ARHGEF6Q15052 776 aa10.16□□□□□ -0.78
PTCHD4-201ENST00000339488 RASA2Q15283 850 aa10.16□□□□□ -0.78
PTCHD4-201ENST00000339488 OASLQ15646 514 aaKnown RBP10.16□□□□□ -0.78
PTCHD4-201ENST00000339488 RTN1Q16799 776 aa10.16□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms