RNA–Protein interactions for RNA: ENST00000339363.7

RPGR-202, Transcript of retinitis pigmentosa GTPase regulator, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene RPGR, Length 3,686 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPGR-202ENST00000339363 KDM1AO60341 852 aa9.8□□□□□ -0.84
RPGR-202ENST00000339363 RNASEH1O60930 286 aaKnown RBP9.8□□□□□ -0.84
RPGR-202ENST00000339363 AKAP3O75969 853 aa9.8□□□□□ -0.84
RPGR-202ENST00000339363 YARSP54577 528 aaKnown RBP9.8□□□□□ -0.84
RPGR-202ENST00000339363 ARPC4P59998 168 aa9.8□□□□□ -0.84
RPGR-202ENST00000339363 PTENP60484 403 aa9.8□□□□□ -0.84
RPGR-202ENST00000339363 RPS8P62241 208 aaKnown RBP9.8□□□□□ -0.84
RPGR-202ENST00000339363 TTLL12Q14166 644 aaPredicted RBP9.8□□□□□ -0.84
RPGR-202ENST00000339363 PPP1R2P3Q6NXS1 205 aa9.8□□□□□ -0.84
RPGR-202ENST00000339363 DUS1LQ6P1R4 473 aaKnown RBP9.8□□□□□ -0.84
RPGR-202ENST00000339363 LRRC6Q86X45 466 aa9.8□□□□□ -0.84
RPGR-202ENST00000339363 ANKRD2Q9GZV1 360 aa9.8□□□□□ -0.84
RPGR-202ENST00000339363 NAGPAQ9UK23 515 aa9.8□□□□□ -0.84
RPGR-202ENST00000339363 TMED5Q9Y3A6 229 aa9.8□□□□□ -0.84
RPGR-202ENST00000339363 PCDHAC2Q9Y5I4 1007 aa9.8□□□□□ -0.84
RPGR-202ENST00000339363 DYNC1LI1Q9Y6G9 523 aaKnown RBP9.8□□□□□ -0.84
RPGR-202ENST00000339363 BHMG1C9JSJ3 638 aaPredicted RBP9.8□□□□□ -0.84
RPGR-202ENST00000339363 CDH16O75309 829 aa9.8□□□□□ -0.84
RPGR-202ENST00000339363 TNFAIP3P21580 790 aa9.8□□□□□ -0.84
RPGR-202ENST00000339363 PSMC1P62191 440 aaKnown RBP9.8□□□□□ -0.84
RPGR-202ENST00000339363 FKBP3Q00688 224 aaKnown RBP9.8□□□□□ -0.84
RPGR-202ENST00000339363 POU5F1Q01860 360 aaKnown RBP9.8□□□□□ -0.84
RPGR-202ENST00000339363 PLOD1Q02809 727 aaPredicted RBP9.8□□□□□ -0.84
RPGR-202ENST00000339363 GIT2Q14161 759 aa9.8□□□□□ -0.84
RPGR-202ENST00000339363 KRT81Q14533 505 aa9.8□□□□□ -0.84
RPGR-202ENST00000339363 MESDQ14696 234 aa9.8□□□□□ -0.84
RPGR-202ENST00000339363 C10orf76Q5T2E6 689 aa9.8□□□□□ -0.84
RPGR-202ENST00000339363 C14orf80Q86SX3 495 aa9.8□□□□□ -0.84
RPGR-202ENST00000339363 LNX1Q8TBB1 728 aaPredicted RBP9.8□□□□□ -0.84
RPGR-202ENST00000339363 ALG3Q92685 438 aa9.8□□□□□ -0.84
RPGR-202ENST00000339363 SLC7A6OSQ96CW6 309 aaPredicted RBP9.8□□□□□ -0.84
RPGR-202ENST00000339363 IFT43Q96FT9 208 aa9.8□□□□□ -0.84
RPGR-202ENST00000339363 HAPLN3Q96S86 360 aa9.8□□□□□ -0.84
RPGR-202ENST00000339363 COG5Q9UP83 839 aa9.8□□□□□ -0.84
RPGR-202ENST00000339363 KIAA0391O15091 583 aaKnown RBP9.8□□□□□ -0.84
RPGR-202ENST00000339363 TTLL1O95922 423 aa9.8□□□□□ -0.84
RPGR-202ENST00000339363 OAS1P00973 400 aaKnown RBP9.8□□□□□ -0.84
RPGR-202ENST00000339363 AMPD1P23109 780 aa9.8□□□□□ -0.84
RPGR-202ENST00000339363 CHRNA3P32297 505 aa9.8□□□□□ -0.84
RPGR-202ENST00000339363 FOXN2P32314 431 aa9.8□□□□□ -0.84
RPGR-202ENST00000339363 NEK2P51955 445 aa9.8□□□□□ -0.84
RPGR-202ENST00000339363 PLCB3Q01970 1234 aa9.8□□□□□ -0.84
RPGR-202ENST00000339363 TMEM119Q4V9L6 283 aa9.8□□□□□ -0.84
RPGR-202ENST00000339363 FAM182AQ5T1J6 154 aa9.8□□□□□ -0.84
RPGR-202ENST00000339363 DUPD1Q68J44 220 aa9.8□□□□□ -0.84
RPGR-202ENST00000339363 VSTM1Q6UX27 236 aa9.8□□□□□ -0.84
RPGR-202ENST00000339363 KCTD1Q719H9 257 aa9.8□□□□□ -0.84
RPGR-202ENST00000339363 MYOCDQ8IZQ8 938 aa9.8□□□□□ -0.84
RPGR-202ENST00000339363 OR6Y1Q8NGX8 325 aa9.8□□□□□ -0.84
RPGR-202ENST00000339363 DEPTORQ8TB45 409 aa9.8□□□□□ -0.84
RPGR-202ENST00000339363 FAM84AQ96KN4 292 aa9.8□□□□□ -0.84
RPGR-202ENST00000339363 ARMCX1Q9P291 453 aa9.8□□□□□ -0.84
RPGR-202ENST00000339363 HBS1LQ9Y450 684 aaKnown RBP9.8□□□□□ -0.84
RPGR-202ENST00000339363 IPO5O00410 1097 aaKnown RBP9.79□□□□□ -0.84
RPGR-202ENST00000339363 CASQ2O14958 399 aaPredicted RBP9.79□□□□□ -0.84
RPGR-202ENST00000339363 ADCY6O43306 1168 aa9.79□□□□□ -0.84
RPGR-202ENST00000339363 CALCAP01258 141 aa9.79□□□□□ -0.84
RPGR-202ENST00000339363 OCM2P0CE71 109 aa9.79□□□□□ -0.84
RPGR-202ENST00000339363 OCMP0CE72 109 aaPredicted RBP9.79□□□□□ -0.84
RPGR-202ENST00000339363 PON1P27169 355 aa9.79□□□□□ -0.84
RPGR-202ENST00000339363 CDC16Q13042 620 aa9.79□□□□□ -0.84
RPGR-202ENST00000339363 PDK3Q15120 406 aa9.79□□□□□ -0.84
RPGR-202ENST00000339363 TMEM214Q6NUQ4 689 aaKnown RBP9.79□□□□□ -0.84
RPGR-202ENST00000339363 KLHL35Q6PF15 583 aa9.79□□□□□ -0.84
RPGR-202ENST00000339363 TRMT10CQ7L0Y3 403 aaKnown RBP9.79□□□□□ -0.84
RPGR-202ENST00000339363 KBTBD2Q8IY47 623 aa9.79□□□□□ -0.84
RPGR-202ENST00000339363 PYDC1Q8WXC3 89 aa9.79□□□□□ -0.84
RPGR-202ENST00000339363 RTFDC1Q9BY42 306 aaPredicted RBP9.79□□□□□ -0.84
RPGR-202ENST00000339363 EDEM3Q9BZQ6 932 aa9.79□□□□□ -0.84
RPGR-202ENST00000339363 PAIP1Q9H074 479 aaKnown RBP9.79□□□□□ -0.84
RPGR-202ENST00000339363 TRABDQ9H4I3 376 aa9.79□□□□□ -0.84
RPGR-202ENST00000339363 PALMDQ9NP74 551 aa9.79□□□□□ -0.84
RPGR-202ENST00000339363 ARL8BQ9NVJ2 186 aa9.79□□□□□ -0.84
RPGR-202ENST00000339363 ANAPC5Q9UJX4 755 aa9.79□□□□□ -0.84
RPGR-202ENST00000339363 NAALADL1Q9UQQ1 740 aa9.79□□□□□ -0.84
RPGR-202ENST00000339363 RREB1Q92766 1687 aa9.79□□□□□ -0.84
RPGR-202ENST00000339363 XPO1O14980 1071 aaKnown RBP9.79□□□□□ -0.84
RPGR-202ENST00000339363 GSTT2P0CG29 244 aa9.79□□□□□ -0.84
RPGR-202ENST00000339363 GSTT2BP0CG30 244 aa9.79□□□□□ -0.84
RPGR-202ENST00000339363 UCHL3P15374 230 aa9.79□□□□□ -0.84
RPGR-202ENST00000339363 RPL5P46777 297 aaKnown RBP9.79□□□□□ -0.84
RPGR-202ENST00000339363 TUFMP49411 452 aaKnown RBP9.79□□□□□ -0.84
RPGR-202ENST00000339363 CTTNQ14247 550 aaKnown RBP9.79□□□□□ -0.84
RPGR-202ENST00000339363 LPIN1Q14693 890 aa9.79□□□□□ -0.84
RPGR-202ENST00000339363 SF3B3Q15393 1217 aaKnown RBP9.79□□□□□ -0.84
RPGR-202ENST00000339363 KRT27Q7Z3Y8 459 aa9.79□□□□□ -0.84
RPGR-202ENST00000339363 ZSWIM2Q8NEG5 633 aa9.79□□□□□ -0.84
RPGR-202ENST00000339363 CNBD2Q96M20 576 aa9.79□□□□□ -0.84
RPGR-202ENST00000339363 PWWP2AQ96N64 755 aa9.79□□□□□ -0.84
RPGR-202ENST00000339363 PRPF18Q99633 342 aaKnown RBP9.79□□□□□ -0.84
RPGR-202ENST00000339363 CCDC28BQ9BUN5 200 aa9.79□□□□□ -0.84
RPGR-202ENST00000339363 ANKFY1Q9P2R3 1169 aa9.79□□□□□ -0.84
RPGR-202ENST00000339363 RPL26L1Q9UNX3 145 aaKnown RBP9.79□□□□□ -0.84
RPGR-202ENST00000339363 BPTFQ12830 3046 aa9.79□□□□□ -0.84
RPGR-202ENST00000339363 LAMB2P55268 1798 aa9.79□□□□□ -0.84
RPGR-202ENST00000339363 RPTORQ8N122 1335 aa9.79□□□□□ -0.84
RPGR-202ENST00000339363 USP17L10C9JJH3 530 aa9.79□□□□□ -0.84
RPGR-202ENST00000339363 PABPC4LP0CB38 370 aaKnown RBP9.79□□□□□ -0.84
RPGR-202ENST00000339363 AKR1B1P15121 316 aa9.79□□□□□ -0.84
RPGR-202ENST00000339363 ATF2P15336 505 aa9.79□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms