RNA–Protein interactions for RNA: ENST00000339269.5

CDK5RAP1-201, Transcript of CDK5 regulatory subunit associated protein 1, humanhuman

TSL 1 (best) BASIC

Gene CDK5RAP1, Length 1,891 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP1-201ENST00000339269 FAM167AQ96KS9 214 aa13.83□□□□□ -0.2
CDK5RAP1-201ENST00000339269 MRPL4Q9BYD3 311 aaKnown RBP13.83□□□□□ -0.2
CDK5RAP1-201ENST00000339269 MTMR12Q9C0I1 747 aa13.83□□□□□ -0.2
CDK5RAP1-201ENST00000339269 AAASQ9NRG9 546 aa13.83□□□□□ -0.2
CDK5RAP1-201ENST00000339269 CHST7Q9NS84 486 aa13.83□□□□□ -0.2
CDK5RAP1-201ENST00000339269 CPSF3Q9UKF6 684 aaKnown RBP13.83□□□□□ -0.2
CDK5RAP1-201ENST00000339269 PPME1Q9Y570 386 aa13.83□□□□□ -0.2
CDK5RAP1-201ENST00000339269 B4GALT5O43286 388 aa13.82□□□□□ -0.2
CDK5RAP1-201ENST00000339269 PRKCBP05771 671 aa13.82□□□□□ -0.2
CDK5RAP1-201ENST00000339269 MYZAPP0CAP1 466 aa13.82□□□□□ -0.2
CDK5RAP1-201ENST00000339269 IVDP26440 423 aa13.82□□□□□ -0.2
CDK5RAP1-201ENST00000339269 LSP1P33241 339 aa13.82□□□□□ -0.2
CDK5RAP1-201ENST00000339269 NSFP46459 744 aaKnown RBP13.82□□□□□ -0.2
CDK5RAP1-201ENST00000339269 EFNA5P52803 228 aa13.82□□□□□ -0.2
CDK5RAP1-201ENST00000339269 ZNF252P-AS1Q0IIN9 211 aa13.82□□□□□ -0.2
CDK5RAP1-201ENST00000339269 TRIM72Q6ZMU5 477 aa13.82□□□□□ -0.2
CDK5RAP1-201ENST00000339269 MMS22LQ6ZRQ5 1243 aa13.82□□□□□ -0.2
CDK5RAP1-201ENST00000339269 PLPPR4Q7Z2D5 763 aa13.82□□□□□ -0.2
CDK5RAP1-201ENST00000339269 ATG4AQ8WYN0 398 aa13.82□□□□□ -0.2
CDK5RAP1-201ENST00000339269 TRIM11Q96F44 468 aa13.82□□□□□ -0.2
CDK5RAP1-201ENST00000339269 XYLT2Q9H1B5 865 aa13.82□□□□□ -0.2
CDK5RAP1-201ENST00000339269 PDGFCQ9NRA1 345 aa13.82□□□□□ -0.2
CDK5RAP1-201ENST00000339269 CWC15Q9P013 229 aaKnown RBP13.82□□□□□ -0.2
CDK5RAP1-201ENST00000339269 RRP15Q9Y3B9 282 aaKnown RBP13.82□□□□□ -0.2
CDK5RAP1-201ENST00000339269 NEU2Q9Y3R4 380 aa13.82□□□□□ -0.2
CDK5RAP1-201ENST00000339269 MCM3APO60318 1980 aa13.82□□□□□ -0.2
CDK5RAP1-201ENST00000339269 PODXLO00592 558 aa13.82□□□□□ -0.2
CDK5RAP1-201ENST00000339269 OGTO15294 1046 aa13.82□□□□□ -0.2
CDK5RAP1-201ENST00000339269 ZEB2O60315 1214 aa13.82□□□□□ -0.2
CDK5RAP1-201ENST00000339269 SLC25A27O95847 323 aa13.82□□□□□ -0.2
CDK5RAP1-201ENST00000339269 SRGAP2CP0DJJ0 459 aa13.82□□□□□ -0.2
CDK5RAP1-201ENST00000339269 TCF4P15884 667 aa13.82□□□□□ -0.2
CDK5RAP1-201ENST00000339269 TBXAS1P24557 533 aaPredicted RBP13.82□□□□□ -0.2
CDK5RAP1-201ENST00000339269 MDH1P40925 334 aaKnown RBP13.82□□□□□ -0.2
CDK5RAP1-201ENST00000339269 SLC1A1P43005 524 aa13.82□□□□□ -0.2
CDK5RAP1-201ENST00000339269 MYL6P60660 151 aa13.82□□□□□ -0.2
CDK5RAP1-201ENST00000339269 MKRN3Q13064 507 aaKnown RBP13.82□□□□□ -0.2
CDK5RAP1-201ENST00000339269 PPIL2Q13356 520 aa13.82□□□□□ -0.2
CDK5RAP1-201ENST00000339269 EEF1DP3Q658K8 133 aa13.82□□□□□ -0.2
CDK5RAP1-201ENST00000339269 RHBDF2Q6PJF5 856 aa13.82□□□□□ -0.2
CDK5RAP1-201ENST00000339269 RNF149Q8NC42 400 aa13.82□□□□□ -0.2
CDK5RAP1-201ENST00000339269 SLC10A4Q96EP9 437 aa13.82□□□□□ -0.2
CDK5RAP1-201ENST00000339269 PABPC3Q9H361 631 aaKnown RBP13.82□□□□□ -0.2
CDK5RAP1-201ENST00000339269 MINDY3Q9H8M7 445 aa13.82□□□□□ -0.2
CDK5RAP1-201ENST00000339269 RSPH14Q9UHP6 348 aa13.82□□□□□ -0.2
CDK5RAP1-201ENST00000339269 RASAL2Q9UJF2 1139 aa13.82□□□□□ -0.2
CDK5RAP1-201ENST00000339269 PTPN22Q9Y2R2 807 aa13.82□□□□□ -0.2
CDK5RAP1-201ENST00000339269 AOC2O75106 756 aa13.81□□□□□ -0.2
CDK5RAP1-201ENST00000339269 IQCF3P0C7M6 154 aa13.81□□□□□ -0.2
CDK5RAP1-201ENST00000339269 MMP8P22894 467 aa13.81□□□□□ -0.2
CDK5RAP1-201ENST00000339269 CCT5P48643 541 aa13.81□□□□□ -0.2
CDK5RAP1-201ENST00000339269 PMS2P54278 862 aa13.81□□□□□ -0.2
CDK5RAP1-201ENST00000339269 C1QBPQ07021 282 aaKnown RBP13.81□□□□□ -0.2
CDK5RAP1-201ENST00000339269 PTGISQ16647 500 aa13.81□□□□□ -0.2
CDK5RAP1-201ENST00000339269 RASAL3Q86YV0 1011 aa13.81□□□□□ -0.2
CDK5RAP1-201ENST00000339269 WDTC1Q8N5D0 677 aa13.81□□□□□ -0.2
CDK5RAP1-201ENST00000339269 CEP120Q8N960 986 aa13.81□□□□□ -0.2
CDK5RAP1-201ENST00000339269 ZNF606Q8WXB4 792 aa13.81□□□□□ -0.2
CDK5RAP1-201ENST00000339269 TFAP2BQ92481 460 aa13.81□□□□□ -0.2
CDK5RAP1-201ENST00000339269 VCPIP1Q96JH7 1222 aa13.81□□□□□ -0.2
CDK5RAP1-201ENST00000339269 ZNF668Q96K58 619 aaPredicted RBP13.81□□□□□ -0.2
CDK5RAP1-201ENST00000339269 DCLK3Q9C098 648 aa13.81□□□□□ -0.2
CDK5RAP1-201ENST00000339269 SEMA4AQ9H3S1 761 aa13.81□□□□□ -0.2
CDK5RAP1-201ENST00000339269 FZD8Q9H461 694 aa13.81□□□□□ -0.2
CDK5RAP1-201ENST00000339269 ADAM22Q9P0K1 906 aa13.81□□□□□ -0.2
CDK5RAP1-201ENST00000339269 THSD7BQ9C0I4 1608 aa13.81□□□□□ -0.2
CDK5RAP1-201ENST00000339269 FAM155AB1AL88 458 aaPredicted RBP13.8□□□□□ -0.2
CDK5RAP1-201ENST00000339269 THAP12O43422 761 aa13.8□□□□□ -0.2
CDK5RAP1-201ENST00000339269 SLC10A3P09131 477 aa13.8□□□□□ -0.2
CDK5RAP1-201ENST00000339269 ASPAP45381 313 aa13.8□□□□□ -0.2
CDK5RAP1-201ENST00000339269 OGDHQ02218 1023 aa13.8□□□□□ -0.2
CDK5RAP1-201ENST00000339269 TSHZ1Q6ZSZ6 1077 aa13.8□□□□□ -0.2
CDK5RAP1-201ENST00000339269 TMEM192Q8IY95 271 aa13.8□□□□□ -0.2
CDK5RAP1-201ENST00000339269 BCAS4Q8TDM0 211 aa13.8□□□□□ -0.2
CDK5RAP1-201ENST00000339269 AZI2Q9H6S1 392 aa13.8□□□□□ -0.2
CDK5RAP1-201ENST00000339269 MTUS1Q9ULD2 1270 aa13.8□□□□□ -0.2
CDK5RAP1-201ENST00000339269 GAS2O43903 313 aaKnown RBP13.8□□□□□ -0.2
CDK5RAP1-201ENST00000339269 CAND2O75155 1236 aa13.8□□□□□ -0.2
CDK5RAP1-201ENST00000339269 HPDP32754 393 aaPredicted RBP13.8□□□□□ -0.2
CDK5RAP1-201ENST00000339269 CLCN3P51790 818 aa13.8□□□□□ -0.2
CDK5RAP1-201ENST00000339269 RPL7AP62424 266 aaKnown RBP13.8□□□□□ -0.2
CDK5RAP1-201ENST00000339269 MBTD1Q05BQ5 628 aa13.8□□□□□ -0.2
CDK5RAP1-201ENST00000339269 MXD4Q14582 209 aaPredicted RBP13.8□□□□□ -0.2
CDK5RAP1-201ENST00000339269 SGO2Q562F6 1265 aa13.8□□□□□ -0.2
CDK5RAP1-201ENST00000339269 PPP1R15BQ5SWA1 713 aa13.8□□□□□ -0.2
CDK5RAP1-201ENST00000339269 MAMDC4Q6UXC1 1216 aa13.8□□□□□ -0.2
CDK5RAP1-201ENST00000339269 CCDC105Q8IYK2 499 aa13.8□□□□□ -0.2
CDK5RAP1-201ENST00000339269 CXorf38Q8TB03 319 aa13.8□□□□□ -0.2
CDK5RAP1-201ENST00000339269 SPATA33Q96N06 139 aa13.8□□□□□ -0.2
CDK5RAP1-201ENST00000339269 MMP19Q99542 508 aa13.8□□□□□ -0.2
CDK5RAP1-201ENST00000339269 SIX4Q9UIU6 781 aa13.8□□□□□ -0.2
CDK5RAP1-201ENST00000339269 NOVA2Q9UNW9 492 aaKnown RBP13.8□□□□□ -0.2
CDK5RAP1-201ENST00000339269 MGAMO43451 1857 aa13.79□□□□□ -0.2
CDK5RAP1-201ENST00000339269 ANK1P16157 1881 aa13.79□□□□□ -0.2
CDK5RAP1-201ENST00000339269 UNCXA6NJT0 531 aa13.79□□□□□ -0.2
CDK5RAP1-201ENST00000339269 MYO1CO00159 1063 aa13.79□□□□□ -0.2
CDK5RAP1-201ENST00000339269 TRIM66O15016 1216 aa13.79□□□□□ -0.2
CDK5RAP1-201ENST00000339269 PSTPIP1O43586 416 aa13.79□□□□□ -0.2
CDK5RAP1-201ENST00000339269 C22orf31O95567 290 aa13.79□□□□□ -0.2
CDK5RAP1-201ENST00000339269 ECEL1O95672 775 aa13.79□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms