RNA–Protein interactions for RNA: ENST00000339162.11

PDLIM2-203, Transcript of PDZ and LIM domain 2, humanhuman

TSL 1 (best) BASIC

Gene PDLIM2, Length 2,226 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-203ENST00000339162 SLC7A5Q01650 507 aa23.95■■□□□ 1.42
PDLIM2-203ENST00000339162 ITIH3Q06033 890 aa23.95■■□□□ 1.42
PDLIM2-203ENST00000339162 CXorf38Q8TB03 319 aa23.95■■□□□ 1.42
PDLIM2-203ENST00000339162 ZSWIM1Q9BR11 485 aa23.95■■□□□ 1.42
PDLIM2-203ENST00000339162 KATNAL1Q9BW62 490 aa23.95■■□□□ 1.42
PDLIM2-203ENST00000339162 CCDC151A5D8V7 595 aa23.94■■□□□ 1.42
PDLIM2-203ENST00000339162 DDX3YO15523 660 aaKnown RBP23.94■■□□□ 1.42
PDLIM2-203ENST00000339162 RRM1P23921 792 aa23.94■■□□□ 1.42
PDLIM2-203ENST00000339162 POLR2BP30876 1174 aaKnown RBP23.94■■□□□ 1.42
PDLIM2-203ENST00000339162 ORC1Q13415 861 aa23.94■■□□□ 1.42
PDLIM2-203ENST00000339162 PBKQ96KB5 322 aa23.94■■□□□ 1.42
PDLIM2-203ENST00000339162 SNX17Q15036 470 aa23.94■■□□□ 1.42
PDLIM2-203ENST00000339162 BRD3Q15059 726 aa23.94■■□□□ 1.42
PDLIM2-203ENST00000339162 TCEAL1Q15170 157 aa23.94■■□□□ 1.42
PDLIM2-203ENST00000339162 ZNF667Q5HYK9 610 aa23.94■■□□□ 1.42
PDLIM2-203ENST00000339162 DCAF12L1Q5VU92 463 aa23.94■■□□□ 1.42
PDLIM2-203ENST00000339162 SLC27A1Q6PCB7 646 aa23.94■■□□□ 1.42
PDLIM2-203ENST00000339162 USP38Q8NB14 1042 aa23.94■■□□□ 1.42
PDLIM2-203ENST00000339162 KIF12Q96FN5 646 aa23.94■■□□□ 1.42
PDLIM2-203ENST00000339162 C11orf70Q9BRQ4 267 aa23.94■■□□□ 1.42
PDLIM2-203ENST00000339162 TRIM7Q9C029 511 aa23.94■■□□□ 1.42
PDLIM2-203ENST00000339162 ARFGAP3Q9NP61 516 aa23.94■■□□□ 1.42
PDLIM2-203ENST00000339162 ZRANB2O95218 330 aaKnown RBP eCLIP23.93■■□□□ 1.42
PDLIM2-203ENST00000339162 COMTP21964 271 aa23.93■■□□□ 1.42
PDLIM2-203ENST00000339162 GRM5P41594 1212 aa23.93■■□□□ 1.42
PDLIM2-203ENST00000339162 NOMO3P69849 1222 aa23.93■■□□□ 1.42
PDLIM2-203ENST00000339162 CDC42EP1Q00587 391 aa23.93■■□□□ 1.42
PDLIM2-203ENST00000339162 CENPCQ03188 943 aa23.93■■□□□ 1.42
PDLIM2-203ENST00000339162 APOL6Q9BWW8 343 aa23.93■■□□□ 1.42
PDLIM2-203ENST00000339162 SDCBP2Q9H190 292 aa23.93■■□□□ 1.42
PDLIM2-203ENST00000339162 SMYD3Q9H7B4 428 aa23.93■■□□□ 1.42
PDLIM2-203ENST00000339162 DMGDHQ9UI17 866 aaKnown RBP23.93■■□□□ 1.42
PDLIM2-203ENST00000339162 AGAP1Q9UPQ3 857 aa23.93■■□□□ 1.42
PDLIM2-203ENST00000339162 ALDH1A1P00352 501 aa23.92■■□□□ 1.42
PDLIM2-203ENST00000339162 ELNP15502 786 aa23.92■■□□□ 1.42
PDLIM2-203ENST00000339162 MARCKSL1P49006 195 aa23.92■■□□□ 1.42
PDLIM2-203ENST00000339162 CACNB2Q08289 660 aaPredicted RBP23.92■■□□□ 1.42
PDLIM2-203ENST00000339162 ZNF211Q13398 564 aaPredicted RBP23.92■■□□□ 1.42
PDLIM2-203ENST00000339162 NOTUMQ6P988 496 aa23.92■■□□□ 1.42
PDLIM2-203ENST00000339162 ALG3Q92685 438 aa23.92■■□□□ 1.42
PDLIM2-203ENST00000339162 KRT35Q92764 455 aa23.92■■□□□ 1.42
PDLIM2-203ENST00000339162 SELENOOQ9BVL4 669 aa23.92■■□□□ 1.42
PDLIM2-203ENST00000339162 CCDC94Q9BW85 323 aaPredicted RBP23.92■■□□□ 1.42
PDLIM2-203ENST00000339162 AP1M1Q9BXS5 423 aa23.92■■□□□ 1.42
PDLIM2-203ENST00000339162 NXF3Q9H4D5 531 aaKnown RBP23.92■■□□□ 1.42
PDLIM2-203ENST00000339162 PIN4Q9Y237 131 aaKnown RBP23.92■■□□□ 1.42
PDLIM2-203ENST00000339162 MTA2O94776 668 aa23.92■■□□□ 1.42
PDLIM2-203ENST00000339162 GJA9P57773 515 aa23.92■■□□□ 1.42
PDLIM2-203ENST00000339162 NOGQ13253 232 aa23.92■■□□□ 1.42
PDLIM2-203ENST00000339162 KYAT1Q16773 422 aa23.92■■□□□ 1.42
PDLIM2-203ENST00000339162 DCAF4L1Q3SXM0 396 aa23.92■■□□□ 1.42
PDLIM2-203ENST00000339162 C11orf63Q6NUN7 778 aa23.92■■□□□ 1.42
PDLIM2-203ENST00000339162 TFAP2BQ92481 460 aa23.92■■□□□ 1.42
PDLIM2-203ENST00000339162 DPP3Q9NY33 737 aa23.92■■□□□ 1.42
PDLIM2-203ENST00000339162 NOC2LQ9Y3T9 749 aaKnown RBP23.92■■□□□ 1.42
PDLIM2-203ENST00000339162 CES2O00748 559 aa23.91■■□□□ 1.42
PDLIM2-203ENST00000339162 AKAP5P24588 427 aa23.91■■□□□ 1.42
PDLIM2-203ENST00000339162 KCTD19Q17RG1 926 aaPredicted RBP23.91■■□□□ 1.42
PDLIM2-203ENST00000339162 LONRF2Q1L5Z9 754 aa23.91■■□□□ 1.42
PDLIM2-203ENST00000339162 GLRA4Q5JXX5 417 aa23.91■■□□□ 1.42
PDLIM2-203ENST00000339162 MON1BQ7L1V2 547 aa23.91■■□□□ 1.42
PDLIM2-203ENST00000339162 ZMAT2Q96NC0 199 aaKnown RBP23.91■■□□□ 1.42
PDLIM2-203ENST00000339162 KRT12Q99456 494 aa23.91■■□□□ 1.42
PDLIM2-203ENST00000339162 TRIM6Q9C030 488 aaPredicted RBP23.91■■□□□ 1.42
PDLIM2-203ENST00000339162 RNF186Q9NXI6 227 aa23.91■■□□□ 1.42
PDLIM2-203ENST00000339162 NBPF20Q3BBV1 942 aa23.91■■□□□ 1.42
PDLIM2-203ENST00000339162 WDR93Q6P2C0 686 aa23.91■■□□□ 1.42
PDLIM2-203ENST00000339162 MMS22LQ6ZRQ5 1243 aa23.91■■□□□ 1.42
PDLIM2-203ENST00000339162 HPDLQ96IR7 371 aa23.91■■□□□ 1.42
PDLIM2-203ENST00000339162 ADAM22Q9P0K1 906 aa23.91■■□□□ 1.42
PDLIM2-203ENST00000339162 UVRAGQ9P2Y5 699 aa23.91■■□□□ 1.42
PDLIM2-203ENST00000339162 HMGXB4Q9UGU5 601 aa23.91■■□□□ 1.42
PDLIM2-203ENST00000339162 CCND3P30281 292 aaPredicted RBP23.9■■□□□ 1.42
PDLIM2-203ENST00000339162 AADACL2Q6P093 401 aa23.9■■□□□ 1.42
PDLIM2-203ENST00000339162 KLHL7Q8IXQ5 586 aa23.9■■□□□ 1.42
PDLIM2-203ENST00000339162 GSPT2Q8IYD1 628 aaKnown RBP23.9■■□□□ 1.42
PDLIM2-203ENST00000339162 ACTRT1Q8TDG2 376 aa23.9■■□□□ 1.42
PDLIM2-203ENST00000339162 CAPNS2Q96L46 248 aa23.9■■□□□ 1.42
PDLIM2-203ENST00000339162 ANAPC7Q9UJX3 599 aa23.9■■□□□ 1.42
PDLIM2-203ENST00000339162 C2CD2Q9Y426 696 aa23.9■■□□□ 1.42
PDLIM2-203ENST00000339162 PGRMC1O00264 195 aaKnown RBP23.9■■□□□ 1.42
PDLIM2-203ENST00000339162 SASH3O75995 380 aa23.9■■□□□ 1.42
PDLIM2-203ENST00000339162 POU5F1Q01860 360 aaKnown RBP23.9■■□□□ 1.42
PDLIM2-203ENST00000339162 FAM47CQ5HY64 1035 aa23.9■■□□□ 1.42
PDLIM2-203ENST00000339162 C8orf74Q6P047 294 aa23.9■■□□□ 1.42
PDLIM2-203ENST00000339162 ZBTB9Q96C00 473 aa23.9■■□□□ 1.42
PDLIM2-203ENST00000339162 BUD13Q9BRD0 619 aaKnown RBP eCLIP23.9■■□□□ 1.421e-6■■■■□ 19.3
PDLIM2-203ENST00000339162 MTG1Q9BT17 334 aaPredicted RBP23.9■■□□□ 1.42
PDLIM2-203ENST00000339162 BCO2Q9BYV7 579 aa23.9■■□□□ 1.42
PDLIM2-203ENST00000339162 TARSL2A2RTX5 802 aaKnown RBP23.89■■□□□ 1.41
PDLIM2-203ENST00000339162 GJB6O95452 261 aa23.89■■□□□ 1.41
PDLIM2-203ENST00000339162 RARBP10826 455 aa23.89■■□□□ 1.41
PDLIM2-203ENST00000339162 GNAT1P11488 350 aa23.89■■□□□ 1.41
PDLIM2-203ENST00000339162 CD19P15391 556 aa23.89■■□□□ 1.41
PDLIM2-203ENST00000339162 HOXC8P31273 242 aa23.89■■□□□ 1.41
PDLIM2-203ENST00000339162 BEND6Q5SZJ8 279 aaPredicted RBP23.89■■□□□ 1.41
PDLIM2-203ENST00000339162 CCDC70Q6NSX1 233 aa23.89■■□□□ 1.41
PDLIM2-203ENST00000339162 TRIM72Q6ZMU5 477 aa23.89■■□□□ 1.41
PDLIM2-203ENST00000339162 ADAT2Q7Z6V5 191 aaKnown RBP23.89■■□□□ 1.41
PDLIM2-203ENST00000339162 C1orf131Q8NDD1 294 aaKnown RBP23.89■■□□□ 1.41
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms