RNA–Protein interactions for RNA: ENST00000338758.11

PARVB-201, Transcript of parvin beta, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PARVB, Length 5,429 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PARVB-201ENST00000338758 TMC2Q8TDI7 906 aa14.96□□□□□ -0.01
PARVB-201ENST00000338758 SYN2Q92777 582 aaPredicted RBP14.96□□□□□ -0.01
PARVB-201ENST00000338758 SLITRK1Q96PX8 696 aa14.96□□□□□ -0.01
PARVB-201ENST00000338758 CGRRF1Q99675 332 aa14.96□□□□□ -0.01
PARVB-201ENST00000338758 TINF2Q9BSI4 451 aa14.96□□□□□ -0.01
PARVB-201ENST00000338758 OSBPL8Q9BZF1 889 aa14.96□□□□□ -0.01
PARVB-201ENST00000338758 ATP11BQ9Y2G3 1177 aa14.96□□□□□ -0.01
PARVB-201ENST00000338758 SGPL1O95470 568 aa14.96□□□□□ -0.01
PARVB-201ENST00000338758 THP07101 528 aa14.96□□□□□ -0.01
PARVB-201ENST00000338758 PAPOLAP51003 745 aaKnown RBP14.96□□□□□ -0.01
PARVB-201ENST00000338758 MMEL1Q495T6 779 aa14.96□□□□□ -0.01
PARVB-201ENST00000338758 TMEM119Q4V9L6 283 aa14.96□□□□□ -0.01
PARVB-201ENST00000338758 TADA2BQ86TJ2 420 aa14.96□□□□□ -0.01
PARVB-201ENST00000338758 CCDC197Q8NCU1 140 aa14.96□□□□□ -0.01
PARVB-201ENST00000338758 RMDN1Q96DB5 314 aa14.96□□□□□ -0.01
PARVB-201ENST00000338758 MTMR9Q96QG7 549 aa14.96□□□□□ -0.01
PARVB-201ENST00000338758 LRRC1Q9BTT6 524 aa14.96□□□□□ -0.01
PARVB-201ENST00000338758 MAGEB5Q9BZ81 275 aa14.96□□□□□ -0.01
PARVB-201ENST00000338758 G3BP2Q9UN86 482 aaKnown RBP14.96□□□□□ -0.01
PARVB-201ENST00000338758 ZC3H4Q9UPT8 1303 aaKnown RBP14.96□□□□□ -0.01
PARVB-201ENST00000338758 KCNN4O15554 427 aa14.96□□□□□ -0.01
PARVB-201ENST00000338758 ZC3H11AO75152 810 aaKnown RBP eCLIP14.96□□□□□ -0.01
PARVB-201ENST00000338758 NCAM1P13591 858 aa14.96□□□□□ -0.01
PARVB-201ENST00000338758 PRAMEP78395 509 aa14.96□□□□□ -0.01
PARVB-201ENST00000338758 SLC12A1Q13621 1099 aa14.96□□□□□ -0.01
PARVB-201ENST00000338758 COLEC11Q9BWP8 271 aa14.96□□□□□ -0.01
PARVB-201ENST00000338758 VPS11Q9H270 941 aa14.96□□□□□ -0.01
PARVB-201ENST00000338758 FARP1Q9Y4F1 1045 aaPredicted RBP14.96□□□□□ -0.01
PARVB-201ENST00000338758 ATP9BO43861 1147 aa14.96□□□□□ -0.02
PARVB-201ENST00000338758 SESN2P58004 480 aaPredicted RBP14.96□□□□□ -0.02
PARVB-201ENST00000338758 IQSEC1Q6DN90 963 aa14.96□□□□□ -0.02
PARVB-201ENST00000338758 FEZF2Q8TBJ5 459 aa14.96□□□□□ -0.02
PARVB-201ENST00000338758 HASPINQ8TF76 798 aa14.96□□□□□ -0.02
PARVB-201ENST00000338758 TTC17Q96AE7 1141 aa14.96□□□□□ -0.02
PARVB-201ENST00000338758 FAM118BQ9BPY3 351 aa14.96□□□□□ -0.02
PARVB-201ENST00000338758 PDGFDQ9GZP0 370 aaPredicted RBP14.96□□□□□ -0.02
PARVB-201ENST00000338758 SMARCAL1Q9NZC9 954 aa14.96□□□□□ -0.02
PARVB-201ENST00000338758 LSM7Q9UK45 103 aaKnown RBP14.96□□□□□ -0.02
PARVB-201ENST00000338758 GTF3C4Q9UKN8 822 aa14.96□□□□□ -0.02
PARVB-201ENST00000338758 PMS2P54278 862 aa14.95□□□□□ -0.02
PARVB-201ENST00000338758 CHADLQ6NUI6 762 aa14.95□□□□□ -0.02
PARVB-201ENST00000338758 RGMBQ6NW40 437 aa14.95□□□□□ -0.02
PARVB-201ENST00000338758 KLC3Q6P597 504 aa14.95□□□□□ -0.02
PARVB-201ENST00000338758 DEFB128Q7Z7B8 93 aa14.95□□□□□ -0.02
PARVB-201ENST00000338758 IL31RAQ8NI17 732 aa14.95□□□□□ -0.02
PARVB-201ENST00000338758 ALKBH8Q96BT7 664 aaKnown RBP14.95□□□□□ -0.02
PARVB-201ENST00000338758 PABPC5Q96DU9 382 aaKnown RBP14.95□□□□□ -0.02
PARVB-201ENST00000338758 THAP2Q9H0W7 228 aa14.95□□□□□ -0.02
PARVB-201ENST00000338758 CNOT10Q9H9A5 744 aaKnown RBP14.95□□□□□ -0.02
PARVB-201ENST00000338758 MID2Q9UJV3 735 aa14.95□□□□□ -0.02
PARVB-201ENST00000338758 ZNF541Q9H0D2 1346 aa14.95□□□□□ -0.02
PARVB-201ENST00000338758 GLTPD2A6NH11 291 aa14.95□□□□□ -0.02
PARVB-201ENST00000338758 COPEO14579 308 aa14.95□□□□□ -0.02
PARVB-201ENST00000338758 ODC1P11926 461 aa14.95□□□□□ -0.02
PARVB-201ENST00000338758 DHX34Q14147 1143 aaKnown RBP14.95□□□□□ -0.02
PARVB-201ENST00000338758 FSCN1Q16658 493 aaKnown RBP14.95□□□□□ -0.02
PARVB-201ENST00000338758 EFHC1Q5JVL4 640 aa14.95□□□□□ -0.02
PARVB-201ENST00000338758 PRAMEF19Q5SWL8 479 aa14.95□□□□□ -0.02
PARVB-201ENST00000338758 HAS1Q92839 578 aa14.95□□□□□ -0.02
PARVB-201ENST00000338758 SNF8Q96H20 258 aa14.95□□□□□ -0.02
PARVB-201ENST00000338758 RASSF4Q9H2L5 321 aa14.95□□□□□ -0.02
PARVB-201ENST00000338758 METTL5Q9NRN9 209 aaKnown RBP14.95□□□□□ -0.02
PARVB-201ENST00000338758 CYB561D2O14569 222 aa14.95□□□□□ -0.02
PARVB-201ENST00000338758 PQBP1O60828 265 aaKnown RBP14.95□□□□□ -0.02
PARVB-201ENST00000338758 AP1G2O75843 785 aa14.95□□□□□ -0.02
PARVB-201ENST00000338758 APRTP07741 180 aa14.95□□□□□ -0.02
PARVB-201ENST00000338758 MFSD10Q14728 455 aa14.95□□□□□ -0.02
PARVB-201ENST00000338758 NOP9Q86U38 636 aaKnown RBP14.95□□□□□ -0.02
PARVB-201ENST00000338758 HMGB1P1B2RPK0 211 aaPredicted RBP14.95□□□□□ -0.02
PARVB-201ENST00000338758 ADCY3O60266 1144 aa14.95□□□□□ -0.02
PARVB-201ENST00000338758 CYBBP04839 570 aa14.95□□□□□ -0.02
PARVB-201ENST00000338758 CDR2Q01850 454 aa14.95□□□□□ -0.02
PARVB-201ENST00000338758 IFT88Q13099 833 aa14.95□□□□□ -0.02
PARVB-201ENST00000338758 TAF2Q6P1X5 1199 aa14.95□□□□□ -0.02
PARVB-201ENST00000338758 SEPT8Q92599 483 aa14.95□□□□□ -0.02
PARVB-201ENST00000338758 DDX23Q9BUQ8 820 aaKnown RBP14.95□□□□□ -0.02
PARVB-201ENST00000338758 PPP1R12CQ9BZL4 782 aa14.95□□□□□ -0.02
PARVB-201ENST00000338758 SNTG2Q9NY99 539 aa14.95□□□□□ -0.02
PARVB-201ENST00000338758 GPD1P21695 349 aa14.95□□□□□ -0.02
PARVB-201ENST00000338758 CDKAL1Q5VV42 579 aa14.95□□□□□ -0.02
PARVB-201ENST00000338758 JADE1Q6IE81 842 aa14.95□□□□□ -0.02
PARVB-201ENST00000338758 USP33Q8TEY7 942 aa14.95□□□□□ -0.02
PARVB-201ENST00000338758 SPIRE2Q8WWL2 714 aa14.95□□□□□ -0.02
PARVB-201ENST00000338758 HMX1Q9NP08 348 aaPredicted RBP14.95□□□□□ -0.02
PARVB-201ENST00000338758 TTI1O43156 1089 aa14.94□□□□□ -0.02
PARVB-201ENST00000338758 CST8O60676 142 aa14.94□□□□□ -0.02
PARVB-201ENST00000338758 ALDH1A3P47895 512 aa14.94□□□□□ -0.02
PARVB-201ENST00000338758 MAPRE1Q15691 268 aaKnown RBP14.94□□□□□ -0.02
PARVB-201ENST00000338758 DEFB115Q30KQ5 88 aa14.94□□□□□ -0.02
PARVB-201ENST00000338758 ZNF507Q8TCN5 953 aa14.94□□□□□ -0.02
PARVB-201ENST00000338758 PPP1R13LQ8WUF5 828 aa14.94□□□□□ -0.02
PARVB-201ENST00000338758 RNF208Q9H0X6 261 aa14.94□□□□□ -0.02
PARVB-201ENST00000338758 LGALS2P05162 132 aa14.94□□□□□ -0.02
PARVB-201ENST00000338758 MMEP08473 750 aa14.94□□□□□ -0.02
PARVB-201ENST00000338758 SHCBP1Q8NEM2 672 aa14.94□□□□□ -0.02
PARVB-201ENST00000338758 SARS2Q9NP81 518 aaKnown RBP14.94□□□□□ -0.02
PARVB-201ENST00000338758 RAB6BQ9NRW1 208 aa14.94□□□□□ -0.02
PARVB-201ENST00000338758 EHD2Q9NZN4 543 aa14.94□□□□□ -0.02
PARVB-201ENST00000338758 SHPRHQ149N8 1683 aa14.94□□□□□ -0.02
PARVB-201ENST00000338758 FRMPD4Q14CM0 1322 aa14.94□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms