RNA–Protein interactions for RNA: ENST00000338399.8

CDK5RAP3-201, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDK5RAP3, Length 1,866 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-201ENST00000338399 GOLGA2P5Q9HBQ8 144 aa15.8■□□□□ 0.12
CDK5RAP3-201ENST00000338399 RGS18Q9NS28 235 aa15.8■□□□□ 0.12
CDK5RAP3-201ENST00000338399 MIOSQ9NXC5 875 aa15.8■□□□□ 0.12
CDK5RAP3-201ENST00000338399 NOCTQ9UK39 431 aaKnown RBP15.8■□□□□ 0.12
CDK5RAP3-201ENST00000338399 ATP11BQ9Y2G3 1177 aa15.8■□□□□ 0.12
CDK5RAP3-201ENST00000338399 GIT1Q9Y2X7 761 aa15.8■□□□□ 0.12
CDK5RAP3-201ENST00000338399 ARL5CA6NH57 179 aa15.8■□□□□ 0.12
CDK5RAP3-201ENST00000338399 CYP11B1P15538 503 aa15.8■□□□□ 0.12
CDK5RAP3-201ENST00000338399 ARHGAP25P42331 645 aa15.8■□□□□ 0.12
CDK5RAP3-201ENST00000338399 PDE6CP51160 858 aa15.8■□□□□ 0.12
CDK5RAP3-201ENST00000338399 AFF1P51825 1210 aaKnown RBP15.8■□□□□ 0.12
CDK5RAP3-201ENST00000338399 VAV2P52735 878 aa15.8■□□□□ 0.12
CDK5RAP3-201ENST00000338399 C1orf53Q5VUE5 145 aa15.8■□□□□ 0.12
CDK5RAP3-201ENST00000338399 TAF3Q5VWG9 929 aa15.8■□□□□ 0.12
CDK5RAP3-201ENST00000338399 C9orf57Q5W0N0 161 aa15.8■□□□□ 0.12
CDK5RAP3-201ENST00000338399 ECHDC2Q86YB7 292 aa15.8■□□□□ 0.12
CDK5RAP3-201ENST00000338399 RPUSD2Q8IZ73 545 aaKnown RBP15.8■□□□□ 0.12
CDK5RAP3-201ENST00000338399 GSTCDQ8NEC7 633 aa15.8■□□□□ 0.12
CDK5RAP3-201ENST00000338399 SLC30A5Q8TAD4 765 aa15.8■□□□□ 0.12
CDK5RAP3-201ENST00000338399 PPP1R10Q96QC0 940 aaKnown RBP15.8■□□□□ 0.12
CDK5RAP3-201ENST00000338399 RPS6KC1Q96S38 1066 aa15.8■□□□□ 0.12
CDK5RAP3-201ENST00000338399 TMEM106CQ9BVX2 250 aa15.8■□□□□ 0.12
CDK5RAP3-201ENST00000338399 PPP1R12CQ9BZL4 782 aa15.8■□□□□ 0.12
CDK5RAP3-201ENST00000338399 HIPK3Q9H422 1215 aa15.8■□□□□ 0.12
CDK5RAP3-201ENST00000338399 CISHQ9NSE2 258 aa15.8■□□□□ 0.12
CDK5RAP3-201ENST00000338399 SEPT11Q9NVA2 429 aaKnown RBP15.8■□□□□ 0.12
CDK5RAP3-201ENST00000338399 TRIM10Q9UDY6 481 aa15.8■□□□□ 0.12
CDK5RAP3-201ENST00000338399 NAGPAQ9UK23 515 aa15.8■□□□□ 0.12
CDK5RAP3-201ENST00000338399 TANC1Q9C0D5 1861 aa15.79■□□□□ 0.12
CDK5RAP3-201ENST00000338399 STAU1O95793 577 aaKnown RBP15.79■□□□□ 0.12
CDK5RAP3-201ENST00000338399 SKIP12755 728 aa15.79■□□□□ 0.12
CDK5RAP3-201ENST00000338399 TNNT1P13805 278 aa15.79■□□□□ 0.12
CDK5RAP3-201ENST00000338399 RAP1GAPP47736 663 aa15.79■□□□□ 0.12
CDK5RAP3-201ENST00000338399 CDH8P55286 799 aa15.79■□□□□ 0.12
CDK5RAP3-201ENST00000338399 MYO1EQ12965 1108 aa15.79■□□□□ 0.12
CDK5RAP3-201ENST00000338399 CCDC122Q5T0U0 273 aa15.79■□□□□ 0.12
CDK5RAP3-201ENST00000338399 ALKBH5Q6P6C2 394 aaKnown RBP15.79■□□□□ 0.12
CDK5RAP3-201ENST00000338399 RBBP8NLQ8NC74 664 aaPredicted RBP15.79■□□□□ 0.12
CDK5RAP3-201ENST00000338399 DBF4BQ8NFT6 615 aa15.79■□□□□ 0.12
CDK5RAP3-201ENST00000338399 TET1Q8NFU7 2136 aa15.79■□□□□ 0.12
CDK5RAP3-201ENST00000338399 LINC01599Q8WXQ3 324 aa15.79■□□□□ 0.12
CDK5RAP3-201ENST00000338399 PGBD4Q96DM1 585 aa15.79■□□□□ 0.12
CDK5RAP3-201ENST00000338399 SCLYQ96I15 445 aa15.79■□□□□ 0.12
CDK5RAP3-201ENST00000338399 BCO2Q9BYV7 579 aa15.79■□□□□ 0.12
CDK5RAP3-201ENST00000338399 LACRTQ9GZZ8 138 aa15.79■□□□□ 0.12
CDK5RAP3-201ENST00000338399 SDCBP2Q9H190 292 aa15.79■□□□□ 0.12
CDK5RAP3-201ENST00000338399 C11orf49Q9H6J7 331 aa15.79■□□□□ 0.12
CDK5RAP3-201ENST00000338399 RSAD1Q9HA92 442 aa15.79■□□□□ 0.12
CDK5RAP3-201ENST00000338399 CNTN6Q9UQ52 1028 aa15.79■□□□□ 0.12
CDK5RAP3-201ENST00000338399 TDRD15B5MCY1 1934 aaKnown RBP15.79■□□□□ 0.12
CDK5RAP3-201ENST00000338399 ANO9A1A5B4 782 aa15.78■□□□□ 0.12
CDK5RAP3-201ENST00000338399 C9IYK1 514 aa15.78■□□□□ 0.12
CDK5RAP3-201ENST00000338399 PIRO00625 290 aa15.78■□□□□ 0.12
CDK5RAP3-201ENST00000338399 P4HA1P13674 534 aa15.78■□□□□ 0.12
CDK5RAP3-201ENST00000338399 CHRNB2P17787 502 aa15.78■□□□□ 0.12
CDK5RAP3-201ENST00000338399 CYP3A5P20815 502 aa15.78■□□□□ 0.12
CDK5RAP3-201ENST00000338399 CCL23P55773 120 aa15.78■□□□□ 0.12
CDK5RAP3-201ENST00000338399 PLEKHG4Q58EX7 1191 aa15.78■□□□□ 0.12
CDK5RAP3-201ENST00000338399 DNAAF5Q86Y56 855 aa15.78■□□□□ 0.12
CDK5RAP3-201ENST00000338399 LRRC52Q8N7C0 313 aa15.78■□□□□ 0.12
CDK5RAP3-201ENST00000338399 FAXDC2Q96IV6 333 aa15.78■□□□□ 0.12
CDK5RAP3-201ENST00000338399 FTHL17Q9BXU8 183 aa15.78■□□□□ 0.12
CDK5RAP3-201ENST00000338399 IRX2Q9BZI1 471 aaPredicted RBP15.78■□□□□ 0.12
CDK5RAP3-201ENST00000338399 SMYD3Q9H7B4 428 aa15.78■□□□□ 0.12
CDK5RAP3-201ENST00000338399 NENFQ9UMX5 172 aa15.78■□□□□ 0.12
CDK5RAP3-201ENST00000338399 THP07101 528 aa15.78■□□□□ 0.12
CDK5RAP3-201ENST00000338399 MMEP08473 750 aa15.78■□□□□ 0.12
CDK5RAP3-201ENST00000338399 SCNN1GP51170 649 aa15.78■□□□□ 0.12
CDK5RAP3-201ENST00000338399 BPIFB4P59827 614 aa15.78■□□□□ 0.12
CDK5RAP3-201ENST00000338399 YWHAEP62258 255 aaKnown RBP15.78■□□□□ 0.12
CDK5RAP3-201ENST00000338399 TNNC1P63316 161 aa15.78■□□□□ 0.12
CDK5RAP3-201ENST00000338399 KIF5AQ12840 1032 aa15.78■□□□□ 0.12
CDK5RAP3-201ENST00000338399 NAB2Q15742 525 aa15.78■□□□□ 0.12
CDK5RAP3-201ENST00000338399 ZNF394Q53GI3 561 aa15.78■□□□□ 0.12
CDK5RAP3-201ENST00000338399 ZNF662Q6ZS27 426 aa15.78■□□□□ 0.12
CDK5RAP3-201ENST00000338399 SLC24A5Q71RS6 500 aa15.78■□□□□ 0.12
CDK5RAP3-201ENST00000338399 ZNF598Q86UK7 904 aaKnown RBP15.78■□□□□ 0.12
CDK5RAP3-201ENST00000338399 PALB2Q86YC2 1186 aa15.78■□□□□ 0.12
CDK5RAP3-201ENST00000338399 DDX1Q92499 740 aaKnown RBP15.78■□□□□ 0.12
CDK5RAP3-201ENST00000338399 MMS19Q96T76 1030 aa15.78■□□□□ 0.12
CDK5RAP3-201ENST00000338399 PACSIN1Q9BY11 444 aa15.78■□□□□ 0.12
CDK5RAP3-201ENST00000338399 WNT8AQ9H1J5 351 aa15.78■□□□□ 0.12
CDK5RAP3-201ENST00000338399 LUC7LQ9NQ29 371 aaKnown RBP15.78■□□□□ 0.12
CDK5RAP3-201ENST00000338399 GUCA1BQ9UMX6 200 aa15.78■□□□□ 0.12
CDK5RAP3-201ENST00000338399 DUSP10Q9Y6W6 482 aa15.78■□□□□ 0.12
CDK5RAP3-201ENST00000338399 FAM170AA1A519 330 aa15.77■□□□□ 0.11
CDK5RAP3-201ENST00000338399 TMCO5BA8MYB1 307 aa15.77■□□□□ 0.11
CDK5RAP3-201ENST00000338399 CYP2C18P33260 490 aa15.77■□□□□ 0.11
CDK5RAP3-201ENST00000338399 ZNF132P52740 706 aa15.77■□□□□ 0.11
CDK5RAP3-201ENST00000338399 FMO1Q01740 532 aa15.77■□□□□ 0.11
CDK5RAP3-201ENST00000338399 CDR2Q01850 454 aa15.77■□□□□ 0.11
CDK5RAP3-201ENST00000338399 LRRC26Q2I0M4 334 aa15.77■□□□□ 0.11
CDK5RAP3-201ENST00000338399 C10orf76Q5T2E6 689 aa15.77■□□□□ 0.11
CDK5RAP3-201ENST00000338399 PCDHB18PQ96TA0 734 aa15.77■□□□□ 0.11
CDK5RAP3-201ENST00000338399 TSPYL2Q9H2G4 693 aaPredicted RBP15.77■□□□□ 0.11
CDK5RAP3-201ENST00000338399 UBN1Q9NPG3 1134 aa15.77■□□□□ 0.11
CDK5RAP3-201ENST00000338399 SLC38A7Q9NVC3 462 aa15.77■□□□□ 0.11
CDK5RAP3-201ENST00000338399 SNX9Q9Y5X1 595 aa15.77■□□□□ 0.11
CDK5RAP3-201ENST00000338399 KRT86O43790 486 aa15.76■□□□□ 0.11
CDK5RAP3-201ENST00000338399 EOMESO95936 686 aa15.76■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms